Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_O21
         (543 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    22   4.0  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   7.0  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   7.0  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   9.2  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   9.2  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   9.2  

>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 8/34 (23%), Positives = 18/34 (52%)
 Frame = -1

Query: 528 GRWFQYNLVCSTRLTHAVIKNIE*K*VFISVVLY 427
           G W + NL  ++ +TH ++   + + + I +  Y
Sbjct: 224 GEWQRDNLNANSSITHWILSGADPQKLAIGIAFY 257


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -2

Query: 134 LMRILMFITWTVY 96
           L+ IL ++ WT+Y
Sbjct: 237 LLTILTYLIWTIY 249


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 10/39 (25%), Positives = 16/39 (41%)
 Frame = -3

Query: 454 MSVYIGGFICALVLAALVIVWIAYCMFIRERAKSENLQY 338
           M   +  F C  VLA ++     YC  + +   +  L Y
Sbjct: 69  MGTIVNAFSCYTVLAPVLCKRQQYCQLMSKLLGNHQLVY 107


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -1

Query: 180 PLPISQPSTGKLIEILNEDPNV 115
           P+P + P+ G  +  +N +PN+
Sbjct: 695 PVPPNFPTCGDHVPEINSNPNL 716


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 13/46 (28%), Positives = 23/46 (50%)
 Frame = -3

Query: 520 VPI*PRLQHSSHTRCYKKY*IKMSVYIGGFICALVLAALVIVWIAY 383
           V I  ++  + +++  K   I+  VY+     ALVLAA+    + Y
Sbjct: 100 VKILSKIDETLNSKPLKPVKIRTKVYLVYCSSALVLAAMTTFHLIY 145


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 13/46 (28%), Positives = 23/46 (50%)
 Frame = -3

Query: 520 VPI*PRLQHSSHTRCYKKY*IKMSVYIGGFICALVLAALVIVWIAY 383
           V I  ++  + +++  K   I+  VY+     ALVLAA+    + Y
Sbjct: 96  VKILSKIDETLNSKPLKPVKIRTKVYLVYCSSALVLAAMTTFHLIY 141


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,224
Number of Sequences: 336
Number of extensions: 2645
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13306679
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)