Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_O21
         (543 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_1115 - 34225793-34225843,34225998-34226072,34226861-342268...    28   5.5  
05_07_0219 - 28474661-28475146,28475979-28476644                       27   7.3  
08_01_0927 - 9123473-9123589,9124534-9124616,9125177-9125252,912...    27   9.7  

>02_05_1115 -
           34225793-34225843,34225998-34226072,34226861-34226898,
           34227017-34227113,34227843-34227967,34228071-34228140
          Length = 151

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = -3

Query: 361 AKSENLQYTISDIQ-HRNYLFSQEQETPVKEK 269
           A S   QY I ++Q H NYLFSQ++   + E+
Sbjct: 4   ASSMLTQYDIEEVQEHCNYLFSQQEIVSLYER 35


>05_07_0219 - 28474661-28475146,28475979-28476644
          Length = 383

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -1

Query: 234 AISKPRTITATDRIXPESPLPISQPSTGKLI 142
           A S  RT TAT    P SP P   P++  L+
Sbjct: 94  ATSSSRTATATATATPTSPTPTPPPTSATLL 124


>08_01_0927 -
           9123473-9123589,9124534-9124616,9125177-9125252,
           9125641-9125740,9125996-9126064,9126122-9126207,
           9126293-9126430,9126688-9126810,9128130-9129719,
           9129929-9130402
          Length = 951

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = -2

Query: 395 LDSLLHVHKGTCEVRKPSIHNIGHTA*ELSVLSRARNSGEREEAD 261
           LDSL+ +H+  C V+KP +  +   +  + V+S      E EE D
Sbjct: 802 LDSLMMIHQYFCYVKKPYLSWLSPHSWHI-VVSMPERGDEEEELD 845


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,555,228
Number of Sequences: 37544
Number of extensions: 288156
Number of successful extensions: 600
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 600
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1210221432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)