Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_O20
(498 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62841 Cluster: 40S ribosomal protein S15; n=46; cellul... 227 1e-58
UniRef50_Q01855 Cluster: 40S ribosomal protein S15; n=140; Eukar... 170 1e-41
UniRef50_Q9FML6 Cluster: 40S ribosomal protein S15-6; n=9; Eukar... 161 1e-38
UniRef50_Q975I5 Cluster: 30S ribosomal protein S19P; n=8; Archae... 122 6e-27
UniRef50_UPI0000DD8522 Cluster: PREDICTED: similar to 40S riboso... 117 1e-25
UniRef50_Q8SRE7 Cluster: RIBOSOMAL PROTEIN S15; n=1; Encephalito... 117 2e-25
UniRef50_UPI00006CD29C Cluster: hypothetical protein TTHERM_0026... 116 2e-25
UniRef50_Q7QTT8 Cluster: GLP_191_11250_10813; n=1; Giardia lambl... 115 7e-25
UniRef50_A2DVD8 Cluster: Ribosomal protein S19, putative; n=1; T... 114 1e-24
UniRef50_Q8ZWL4 Cluster: 30S ribosomal protein S19P; n=7; Archae... 111 6e-24
UniRef50_P15010 Cluster: 30S ribosomal protein S19P; n=5; Euryar... 111 8e-24
UniRef50_Q9HIR3 Cluster: 30S ribosomal protein S19P; n=8; Euryar... 106 2e-22
UniRef50_Q6LX07 Cluster: 30S ribosomal protein S19P; n=9; Euryar... 103 2e-21
UniRef50_Q74MZ5 Cluster: 30S ribosomal protein S19P; n=1; Nanoar... 103 3e-21
UniRef50_Q3LWF2 Cluster: Ribosomal protein L15; n=1; Bigelowiell... 91 1e-17
UniRef50_Q8PV46 Cluster: 30S ribosomal protein S19P; n=9; Archae... 90 2e-17
UniRef50_Q2QAS7 Cluster: Ribosomal protein S19; n=3; Archaea|Rep... 84 1e-15
UniRef50_Q00XN5 Cluster: Homology to unknown gene; n=2; Ostreoco... 78 1e-13
UniRef50_A7QFV7 Cluster: Chromosome undetermined scaffold_89, wh... 66 5e-10
UniRef50_P94271 Cluster: 30S ribosomal protein S19; n=66; cellul... 60 2e-08
UniRef50_Q8M1F9 Cluster: Ribosomal protein S19; n=1; Chaetosphae... 56 6e-07
UniRef50_O66435 Cluster: 30S ribosomal protein S19; n=32; Bacter... 55 8e-07
UniRef50_Q9AIN5 Cluster: Ribosomal protein S19; n=1; Candidatus ... 55 1e-06
UniRef50_Q4URE3 Cluster: 30S ribosomal protein S19; n=18; cellul... 55 1e-06
UniRef50_A6S058 Cluster: Mitochondrial ribosome small subunit co... 54 2e-06
UniRef50_UPI00015BD7EF Cluster: UPI00015BD7EF related cluster; n... 53 3e-06
UniRef50_A6QU02 Cluster: Predicted protein; n=1; Ajellomyces cap... 53 4e-06
UniRef50_Q9US30 Cluster: Probable mitochondrial ribosomal protei... 52 7e-06
UniRef50_P56808 Cluster: Chloroplast 30S ribosomal protein S19; ... 52 1e-05
UniRef50_P0A4B5 Cluster: 30S ribosomal protein S19; n=47; Bacter... 51 1e-05
UniRef50_Q2GUS0 Cluster: Putative uncharacterized protein; n=1; ... 49 5e-05
UniRef50_Q5GSU8 Cluster: Ribosomal protein S19; n=10; Rickettsia... 49 7e-05
UniRef50_Q8D208 Cluster: 30S ribosomal protein S19; n=14; cellul... 49 7e-05
UniRef50_P0A7U6 Cluster: 30S ribosomal protein S19; n=263; cellu... 49 7e-05
UniRef50_Q8LWZ8 Cluster: Ribosomal protein S19; n=16; stramenopi... 48 9e-05
UniRef50_Q2EEV9 Cluster: Ribosomal protein S19; n=1; Helicospori... 48 9e-05
UniRef50_Q6A6N0 Cluster: 30S ribosomal protein S19; n=75; cellul... 48 9e-05
UniRef50_P53733 Cluster: Mitochondrial 37S ribosomal protein S19... 48 1e-04
UniRef50_P50893 Cluster: Mitochondrial ribosomal protein S19; n=... 48 1e-04
UniRef50_Q9G868 Cluster: Ribosomal protein S19; n=2; Eukaryota|R... 48 2e-04
UniRef50_Q6YR17 Cluster: 30S ribosomal protein S19; n=72; cellul... 48 2e-04
UniRef50_A1DE43 Cluster: Mitochondrial ribosomal protein S19, pu... 47 2e-04
UniRef50_P39697 Cluster: 40S ribosomal protein S19, mitochondria... 47 2e-04
UniRef50_P26874 Cluster: Mitochondrial ribosomal protein S19; n=... 46 4e-04
UniRef50_A6YEB0 Cluster: Ribosomal protein S19; n=1; Chlorokybus... 46 5e-04
UniRef50_Q6CDN4 Cluster: Yarrowia lipolytica chromosome B of str... 46 6e-04
UniRef50_Q0CW10 Cluster: Putative uncharacterized protein; n=1; ... 45 8e-04
UniRef50_Q9TAJ3 Cluster: Ribosomal protein S19; n=1; Cafeteria r... 44 0.002
UniRef50_A6BM61 Cluster: Ribosomal protein S19; n=1; Gnetum parv... 42 0.006
UniRef50_Q6E790 Cluster: Ribosomal protein S19; n=6; Oomycetes|R... 42 0.008
UniRef50_P0C478 Cluster: Chloroplast 30S ribosomal protein S19; ... 41 0.013
UniRef50_P34772 Cluster: Plastid 30S ribosomal protein S19; n=1;... 41 0.013
UniRef50_Q6UVU3 Cluster: Ribosomal protein S19; n=1; Pseudendocl... 40 0.023
UniRef50_Q06FM4 Cluster: Ribosomal protein S19; n=1; Pelargonium... 40 0.031
UniRef50_Q23889 Cluster: Ribosomal protein S19; n=2; Dictyosteli... 40 0.031
UniRef50_A7QBJ9 Cluster: Chromosome chr13 scaffold_74, whole gen... 40 0.041
UniRef50_Q0QIR8 Cluster: Ribosomal protein S19; n=1; Oltmannsiel... 39 0.054
UniRef50_A2DH24 Cluster: Putative uncharacterized protein; n=1; ... 35 0.88
UniRef50_Q4CAU9 Cluster: Putative uncharacterized protein; n=1; ... 35 1.2
UniRef50_Q6HT65 Cluster: ComE operon protein 1; n=22; Bacillus|R... 34 1.5
UniRef50_Q9G8T6 Cluster: Ribosomal protein S19; n=1; Rhodomonas ... 34 1.5
UniRef50_A7QLC7 Cluster: Chromosome chr11 scaffold_118, whole ge... 34 1.5
UniRef50_Q8IB15 Cluster: Putative uncharacterized protein MAL8P1... 33 2.7
UniRef50_Q8HIT4 Cluster: Ribosomal protein S19; n=1; Monosiga br... 33 4.7
UniRef50_Q7YN78 Cluster: Ribosomal protein S19; n=1; Eimeria ten... 33 4.7
UniRef50_Q7LYZ0 Cluster: Gag polyprotein; n=1; Human endogenous ... 32 6.2
UniRef50_Q9MTE4 Cluster: Ribosomal protein S19; n=1; Toxoplasma ... 32 6.2
UniRef50_Q54WU0 Cluster: Putative basic-leucine zipper (BZIP) tr... 32 8.2
UniRef50_Q6FLN2 Cluster: Similar to sp|P18480 Saccharomyces cere... 32 8.2
>UniRef50_P62841 Cluster: 40S ribosomal protein S15; n=46; cellular
organisms|Rep: 40S ribosomal protein S15 - Homo sapiens
(Human)
Length = 145
Score = 227 bits (555), Expect = 1e-58
Identities = 108/142 (76%), Positives = 123/142 (86%)
Frame = -3
Query: 442 MAEVDETLKKKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXRGLKRKPMALVK 263
MAEV++ KKKR FRKFTYRGVDLDQLLDM EQLM+L RGL+RK +L+K
Sbjct: 1 MAEVEQ--KKKRTFRKFTYRGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLK 58
Query: 262 KLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGE 83
+LR+AKKEAPP EKPE+VKTHLR+MII+PEMVGS+VG+YNGKTFNQVEIKPEMIGHYLGE
Sbjct: 59 RLRKAKKEAPPMEKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPEMIGHYLGE 118
Query: 82 FSVTYKPVKHGRPGIGATHSXK 17
FS+TYKPVKHGRPGIGATHS +
Sbjct: 119 FSITYKPVKHGRPGIGATHSSR 140
>UniRef50_Q01855 Cluster: 40S ribosomal protein S15; n=140;
Eukaryota|Rep: 40S ribosomal protein S15 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 142
Score = 170 bits (414), Expect = 1e-41
Identities = 77/125 (61%), Positives = 95/125 (76%)
Frame = -3
Query: 415 KKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXRGLKRKPMALVKKLRRAKKEA 236
KKR+F+ +YRGVDL++LL+M E ++L RG+ KP +KKLR AK A
Sbjct: 8 KKRVFKTHSYRGVDLEKLLEMSTEDFVKLAPARVRRRFARGMTSKPAGFMKKLRAAKLAA 67
Query: 235 PPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVK 56
P NEKP V+TH+RNMIIVPEM+GS+VGIYNGK FNQVEI+PEM+GHYLGEFS+TY PV+
Sbjct: 68 PENEKPAPVRTHMRNMIIVPEMIGSVVGIYNGKAFNQVEIRPEMLGHYLGEFSITYTPVR 127
Query: 55 HGRPG 41
HGR G
Sbjct: 128 HGRAG 132
>UniRef50_Q9FML6 Cluster: 40S ribosomal protein S15-6; n=9;
Eukaryota|Rep: 40S ribosomal protein S15-6 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 160
Score = 161 bits (390), Expect = 1e-38
Identities = 77/128 (60%), Positives = 96/128 (75%), Gaps = 2/128 (1%)
Frame = -3
Query: 415 KKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXRGLKRKPMALVKKLRRAKKEA 236
KKR F+KF++RG ++D LL M N L +L + RGLK++P+ L+KKLRRAKKEA
Sbjct: 17 KKRTFKKFSFRGFNVDALLKMSNVDLAKLFNARVRRRFYRGLKKQPLILIKKLRRAKKEA 76
Query: 235 PPNEK--PEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKP 62
K PE+VKTHLRNMIIVPEM+GS+VG++NGK FN++ IKPEMIGHYL EFS+T K
Sbjct: 77 SDENKMKPEVVKTHLRNMIIVPEMIGSVVGVHNGKKFNEIVIKPEMIGHYLAEFSMTCKK 136
Query: 61 VKHGRPGI 38
V H RP I
Sbjct: 137 VNHHRPRI 144
>UniRef50_Q975I5 Cluster: 30S ribosomal protein S19P; n=8;
Archaea|Rep: 30S ribosomal protein S19P - Sulfolobus
tokodaii
Length = 140
Score = 122 bits (293), Expect = 6e-27
Identities = 57/127 (44%), Positives = 85/127 (66%)
Frame = -3
Query: 403 FRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXRGLKRKPMALVKKLRRAKKEAPPNE 224
++KF YRG LD+LL+MP ++ ++L+ +G K L++K+R+ +E +
Sbjct: 9 WKKFRYRGKSLDELLNMPMDEFIKLLPSRQRRSLKKGFSDKQRRLLEKIRKYVREG---K 65
Query: 223 KPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRP 44
+ +KTH+R+MII+PEMVG +YNGK F + ++ PEMIGHYLGEFS+T K V+HG P
Sbjct: 66 YSKTIKTHVRDMIILPEMVGLKFAVYNGKEFVEFQVVPEMIGHYLGEFSITTKKVEHGEP 125
Query: 43 GIGATHS 23
G+ AT S
Sbjct: 126 GLKATRS 132
>UniRef50_UPI0000DD8522 Cluster: PREDICTED: similar to 40S ribosomal
protein S15 (RIG protein); n=2; Homo sapiens|Rep:
PREDICTED: similar to 40S ribosomal protein S15 (RIG
protein) - Homo sapiens
Length = 134
Score = 117 bits (282), Expect = 1e-25
Identities = 62/114 (54%), Positives = 80/114 (70%), Gaps = 6/114 (5%)
Frame = -3
Query: 439 AEVDETLKKKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXR------GLKRKP 278
AEV + +KK+ FR FT RGVDLDQLLDM +EQ M+L GL RK
Sbjct: 15 AEVQQ--QKKQTFRNFTQRGVDLDQLLDMSSEQRMQLNSARRRRLNPGLWRLNPGLWRKQ 72
Query: 277 MALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEI 116
+L+K+LR+AKK APP EKPE+VKTH R+++++P MVGS VG+Y+GKTF QVE+
Sbjct: 73 RSLLKRLRKAKKGAPPTEKPEVVKTHPRDVLLLPAMVGSTVGVYDGKTFKQVEM 126
>UniRef50_Q8SRE7 Cluster: RIBOSOMAL PROTEIN S15; n=1;
Encephalitozoon cuniculi|Rep: RIBOSOMAL PROTEIN S15 -
Encephalitozoon cuniculi
Length = 149
Score = 117 bits (281), Expect = 2e-25
Identities = 60/139 (43%), Positives = 86/139 (61%), Gaps = 1/139 (0%)
Frame = -3
Query: 430 DETLKKKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXRGLKRKPMALVKKLRR 251
+E KKKR FR++TYRGV +++L MP ++ +L RGL + + L+K
Sbjct: 6 NEVSKKKRTFRRYTYRGVPVEELEKMPFSEVAKLFPSRLRRRVRRGLSSREVELIKGCIA 65
Query: 250 AKKEA-PPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSV 74
AK + KPE+V+TH R+ II P M+G++VG++ G + VEIKPEM+G L +F+
Sbjct: 66 AKAACVSSSSKPEMVRTHARSAIIWPAMIGALVGVHVGNGYLPVEIKPEMVGFVLSDFAP 125
Query: 73 TYKPVKHGRPGIGATHSXK 17
T KHGRPGIGA+ S K
Sbjct: 126 TRVTPKHGRPGIGASSSSK 144
>UniRef50_UPI00006CD29C Cluster: hypothetical protein
TTHERM_00266390; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00266390 - Tetrahymena
thermophila SB210
Length = 144
Score = 116 bits (280), Expect = 2e-25
Identities = 58/133 (43%), Positives = 82/133 (61%), Gaps = 9/133 (6%)
Frame = -3
Query: 412 KRIFRKFTYRGVDLDQLLDMPN---------EQLMELMHXXXXXXXXRGLKRKPMALVKK 260
K+ +KFT+RG L++L + + ++L L RG+ K V K
Sbjct: 5 KKSIKKFTFRGKGLEELTALASGSNSEKLISDELAALFDAKTRRRVKRGISEKYAKFVNK 64
Query: 259 LRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEF 80
+RR+K++ P EKP VKTH R+MI++PE+VG IVG+YNGK F VE+K +MIG YL EF
Sbjct: 65 VRRSKEKCPAGEKPVPVKTHYRSMIVIPELVGGIVGVYNGKEFVNVEVKFDMIGKYLAEF 124
Query: 79 SVTYKPVKHGRPG 41
++TYKP HG+ G
Sbjct: 125 AMTYKPTTHGKTG 137
>UniRef50_Q7QTT8 Cluster: GLP_191_11250_10813; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_191_11250_10813 - Giardia lamblia
ATCC 50803
Length = 145
Score = 115 bits (276), Expect = 7e-25
Identities = 58/139 (41%), Positives = 87/139 (62%), Gaps = 1/139 (0%)
Frame = -3
Query: 430 DETLKKKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXX-XXXXXXRGLKRKPMALVKKLR 254
D+ ++R + +RGV++++L M ++ ++ GL K + V KLR
Sbjct: 3 DQVKTRRRGLAQPNFRGVEVEKLATMKITDILPKLNARCRRRIGKHGLSMKHLRFVNKLR 62
Query: 253 RAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSV 74
++ A P++KP+IV+THLR+MII PEM+G V +YNG+ F VEIKP M+G L E+S+
Sbjct: 63 -LRRAAQPSQKPKIVRTHLRDMIIFPEMIGMTVSVYNGRQFIPVEIKPPMVGRALREYSM 121
Query: 73 TYKPVKHGRPGIGATHSXK 17
+YK V HG+ GIGAT S K
Sbjct: 122 SYKIVSHGKVGIGATRSSK 140
>UniRef50_A2DVD8 Cluster: Ribosomal protein S19, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein S19,
putative - Trichomonas vaginalis G3
Length = 144
Score = 114 bits (274), Expect = 1e-24
Identities = 56/133 (42%), Positives = 83/133 (62%), Gaps = 2/133 (1%)
Frame = -3
Query: 400 RKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXRGLKRKPMALVKKLRRAKK--EAPPN 227
R +TYRG LD L M + +EL+ R K + L++KL++A++ E
Sbjct: 10 RNYTYRGKTLDDLRAMELKDFVELLPTKRRRFISRSFDLKHVHLIEKLKKARQAVEGQAG 69
Query: 226 EKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGR 47
+P +VKTHLR+M+I+PE V +++GIY+G F +V+IKPEMIGH L +F+ + K VKH +
Sbjct: 70 VRPPVVKTHLRHMVILPEFVDNVIGIYDGHVFFEVQIKPEMIGHVLADFAPSKKVVKHSK 129
Query: 46 PGIGATHSXKVHS 8
G+GAT S S
Sbjct: 130 AGVGATRSSSATS 142
>UniRef50_Q8ZWL4 Cluster: 30S ribosomal protein S19P; n=7;
Archaea|Rep: 30S ribosomal protein S19P - Pyrobaculum
aerophilum
Length = 158
Score = 111 bits (268), Expect = 6e-24
Identities = 56/124 (45%), Positives = 83/124 (66%)
Frame = -3
Query: 394 FTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXRGLKRKPMALVKKLRRAKKEAPPNEKPE 215
F YRG L++LL+M ++ ++L+ RGLK + L++K+R+AK+ A +K
Sbjct: 29 FRYRGKTLEELLNMSMDEFIKLLPARQRRSLKRGLKPEHRKLLEKIRKAKRLAAQGKKV- 87
Query: 214 IVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIG 35
+++TH R+MII+PEMVG + +YNG T+ V I P IGHYLGEF++T K V+HG PG+
Sbjct: 88 VIRTHCRDMIILPEMVGLTIHVYNGITYIPVFISPWHIGHYLGEFALTTKIVQHGEPGLK 147
Query: 34 ATHS 23
AT S
Sbjct: 148 ATRS 151
>UniRef50_P15010 Cluster: 30S ribosomal protein S19P; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S19P -
Halobacterium salinarium (Halobacterium halobium)
Length = 140
Score = 111 bits (267), Expect = 8e-24
Identities = 55/127 (43%), Positives = 78/127 (61%)
Frame = -3
Query: 397 KFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXRGLKRKPMALVKKLRRAKKEAPPNEKP 218
+FTYRG DLD+L +M E + EL+ RGL + ++ + R + E N
Sbjct: 12 EFTYRGHDLDELQEMSLEDVAELLPARQRRTITRGLSEEHHKVLAEARESGTEETANNP- 70
Query: 217 EIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGI 38
++THLR+M ++PE VG +Y G+ F +VE++PEMIGHYLGEF +T V+HG+ GI
Sbjct: 71 --IRTHLRDMPVLPEFVGLTFAVYTGQEFERVEVQPEMIGHYLGEFQLTRSSVEHGQAGI 128
Query: 37 GATHSXK 17
GAT S K
Sbjct: 129 GATRSSK 135
>UniRef50_Q9HIR3 Cluster: 30S ribosomal protein S19P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S19P -
Thermoplasma acidophilum
Length = 151
Score = 106 bits (255), Expect = 2e-22
Identities = 63/149 (42%), Positives = 88/149 (59%)
Frame = -3
Query: 463 SVK*TRNMAEVDETLKKKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXRGLKR 284
SVK + A + + R ++FTY+G L+ L M E+L++++ L R
Sbjct: 8 SVKSIKRKARKSKKVVSGRA-KEFTYKGYSLEDLQKMSMEELIKILPARARRT----LLR 62
Query: 283 KPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEM 104
+P KKL K E+ + VKTH+R++II+P VG IV +YNG ++ + EIKPEM
Sbjct: 63 EPNYEQKKLME-KLESDEED----VKTHVRDVIILPNYVGKIVEVYNGNSYFKFEIKPEM 117
Query: 103 IGHYLGEFSVTYKPVKHGRPGIGATHSXK 17
IGHYLGEF +T K VKH PG+GAT S K
Sbjct: 118 IGHYLGEFVMTRKEVKHSGPGVGATRSSK 146
>UniRef50_Q6LX07 Cluster: 30S ribosomal protein S19P; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S19P -
Methanococcus maripaludis
Length = 161
Score = 103 bits (248), Expect = 2e-21
Identities = 45/123 (36%), Positives = 76/123 (61%)
Frame = -3
Query: 397 KFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXRGLKRKPMALVKKLRRAKKEAPPNEKP 218
+F Y+G L++L +MP ++ ME++ RG+ K LV K+++A++ +
Sbjct: 30 EFKYKGFSLEELQEMPIKKFMEIVPSRQRRTMARGITPKQRKLVMKIKKARRLTNRGKDA 89
Query: 217 EIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGI 38
+++TH R+ +I PEM+G GIYNGK F ++++ E +G +LGE + T V+HG PG+
Sbjct: 90 RVIRTHCRDFVITPEMIGLTFGIYNGKEFKEIKLVEETVGRFLGEMAPTRGVVQHGSPGM 149
Query: 37 GAT 29
GAT
Sbjct: 150 GAT 152
>UniRef50_Q74MZ5 Cluster: 30S ribosomal protein S19P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S19P -
Nanoarchaeum equitans
Length = 140
Score = 103 bits (246), Expect = 3e-21
Identities = 58/126 (46%), Positives = 73/126 (57%)
Frame = -3
Query: 400 RKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXRGLKRKPMALVKKLRRAKKEAPPNEK 221
++F Y+G L +L M E+L ++M R LK KKL + A +
Sbjct: 8 KEFRYKGYTLQELEQMSLEELAKIMPARQRRTLLRRLKFGWSDQQKKLFKKILLAKEGKY 67
Query: 220 PEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPG 41
+ +KTH RN II+P MVG V +YNGK + V+IKPEMIGHYLGEFS T K KH PG
Sbjct: 68 KKPIKTHARNTIILPFMVGVTVHVYNGKEYVPVQIKPEMIGHYLGEFSFTTKRPKHSAPG 127
Query: 40 IGATHS 23
IGAT S
Sbjct: 128 IGATRS 133
>UniRef50_Q3LWF2 Cluster: Ribosomal protein L15; n=1; Bigelowiella
natans|Rep: Ribosomal protein L15 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 151
Score = 91.5 bits (217), Expect = 1e-17
Identities = 36/65 (55%), Positives = 51/65 (78%)
Frame = -3
Query: 211 VKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGA 32
+KTH+RN II P M+ + +YNG +++ +E++ M+G +LGEFS+TYKPVKHG PGIGA
Sbjct: 82 LKTHVRNCIITPSMINKKIYVYNGNSYSYIELQTLMLGKFLGEFSLTYKPVKHGNPGIGA 141
Query: 31 THSXK 17
THS +
Sbjct: 142 THSSR 146
>UniRef50_Q8PV46 Cluster: 30S ribosomal protein S19P; n=9;
Archaea|Rep: 30S ribosomal protein S19P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 136
Score = 90.2 bits (214), Expect = 2e-17
Identities = 47/127 (37%), Positives = 71/127 (55%)
Frame = -3
Query: 397 KFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXRGLKRKPMALVKKLRRAKKEAPPNEKP 218
++TYRG + +L ++ E+ EL+ RG ++ + + KK
Sbjct: 15 EYTYRGKTVSELQELSLEEFAELLPSRERRSIKRGFTDGQKKVLHEFKEGKK-------- 66
Query: 217 EIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGI 38
++TH R+MII+PEM+G + ++NGK F VE++PEMIGH GEF+ T V HG G+
Sbjct: 67 --IRTHHRDMIILPEMIGIAIEVHNGKEFVNVELQPEMIGHRFGEFAPTRSRVNHGSAGV 124
Query: 37 GATHSXK 17
GAT S K
Sbjct: 125 GATRSSK 131
>UniRef50_Q2QAS7 Cluster: Ribosomal protein S19; n=3; Archaea|Rep:
Ribosomal protein S19 - uncultured marine group II
euryarchaeote HF70_59C08
Length = 173
Score = 84.2 bits (199), Expect = 1e-15
Identities = 37/71 (52%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Frame = -3
Query: 226 EKP-EIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHG 50
E P + +KTH R++ I+PEMVG +G+++G+ F VEI PEMIGH LGE++ T + V H
Sbjct: 98 ENPGKTIKTHCRSLYILPEMVGRTIGVHDGRAFKMVEILPEMIGHALGEYASTRRSVTHT 157
Query: 49 RPGIGATHSXK 17
PG+GAT S K
Sbjct: 158 GPGVGATRSSK 168
>UniRef50_Q00XN5 Cluster: Homology to unknown gene; n=2;
Ostreococcus|Rep: Homology to unknown gene -
Ostreococcus tauri
Length = 561
Score = 77.8 bits (183), Expect = 1e-13
Identities = 44/75 (58%), Positives = 47/75 (62%)
Frame = +3
Query: 42 PGLPCFTGLYVTENSPR*WPIISGLISTWLKVFPL*MPTIEPTISGTMIMFLK*VFTISG 221
P PC TG YV SPR PIISGLIST L PL PT EPTISG M M + V T+SG
Sbjct: 22 PARPCETGRYVIAYSPRYDPIISGLISTVLNTLPLYTPTTEPTISGMMGMLRRCVRTVSG 81
Query: 222 FSFGGASFLARRSFL 266
FS + LA RSFL
Sbjct: 82 FSIPTTAALALRSFL 96
>UniRef50_A7QFV7 Cluster: Chromosome undetermined scaffold_89, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_89, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 319
Score = 65.7 bits (153), Expect = 5e-10
Identities = 33/62 (53%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Frame = -3
Query: 259 LRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEI-KPEMIGHYLGE 83
L+ + + P+E P+ + HL NMIIV EM+G IVG+YNGKT NQV I KP+ I HYL
Sbjct: 11 LKTKTRGSIPSENPKQTRIHLYNMIIVLEMIGYIVGVYNGKTLNQVGILKPKKICHYLTS 70
Query: 82 FS 77
S
Sbjct: 71 LS 72
>UniRef50_P94271 Cluster: 30S ribosomal protein S19; n=66; cellular
organisms|Rep: 30S ribosomal protein S19 - Borrelia
burgdorferi (Lyme disease spirochete)
Length = 92
Score = 60.5 bits (140), Expect = 2e-08
Identities = 29/74 (39%), Positives = 46/74 (62%)
Frame = -3
Query: 292 LKRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIK 113
+K+ P + K L + + +EK ++KT+ R+ I+PEMV + +YNGKTF + I
Sbjct: 5 IKKGPF-IEKSLYQKVLSSFGSEKRVVIKTYSRSSTIIPEMVSLTISVYNGKTFIPIYIT 63
Query: 112 PEMIGHYLGEFSVT 71
+++GH LGEFS T
Sbjct: 64 EDLVGHKLGEFSPT 77
>UniRef50_Q8M1F9 Cluster: Ribosomal protein S19; n=1;
Chaetosphaeridium globosum|Rep: Ribosomal protein S19 -
Chaetosphaeridium globosum
Length = 114
Score = 55.6 bits (128), Expect = 6e-07
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Frame = -3
Query: 283 KPMALVKKLRR--AKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKP 110
+PM +L+R + ++A + + K R I+P+ VG+IV +YNGK F ++I
Sbjct: 23 RPMGEDTRLKREGSTEQAFVTKSSSLQKIWSRRSCILPQFVGNIVSVYNGKNFVNLKITD 82
Query: 109 EMIGHYLGEFSVTYKPVK 56
EM+GH GEF+ T K K
Sbjct: 83 EMVGHKYGEFASTRKIAK 100
>UniRef50_O66435 Cluster: 30S ribosomal protein S19; n=32;
Bacteria|Rep: 30S ribosomal protein S19 - Aquifex
aeolicus
Length = 219
Score = 55.2 bits (127), Expect = 8e-07
Identities = 26/61 (42%), Positives = 39/61 (63%)
Frame = -3
Query: 253 RAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSV 74
R +K E+ ++V+T+ R I+PE VG + ++NGKTF V I +M+GH LGEF+
Sbjct: 143 RIRKMNETGER-KVVRTYSRATTIIPEFVGHTIAVHNGKTFVPVYITQDMVGHKLGEFAP 201
Query: 73 T 71
T
Sbjct: 202 T 202
>UniRef50_Q9AIN5 Cluster: Ribosomal protein S19; n=1; Candidatus
Carsonella ruddii|Rep: Ribosomal protein S19 -
Carsonella ruddii
Length = 88
Score = 54.8 bits (126), Expect = 1e-06
Identities = 26/54 (48%), Positives = 35/54 (64%)
Frame = -3
Query: 208 KTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGR 47
KT RN I+P+M+G + ++NGK FN+V I EMIG+ LGEFS T H +
Sbjct: 25 KTWSRNSTIIPKMIGLNIFVHNGKKFNKVYIIEEMIGYKLGEFSFTKNFKSHSK 78
>UniRef50_Q4URE3 Cluster: 30S ribosomal protein S19; n=18; cellular
organisms|Rep: 30S ribosomal protein S19 - Xanthomonas
campestris pv. campestris (strain 8004)
Length = 89
Score = 54.8 bits (126), Expect = 1e-06
Identities = 31/81 (38%), Positives = 46/81 (56%)
Frame = -3
Query: 292 LKRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIK 113
LK+ P + L + + A ++KP +KT R +I+PEMVG + ++NGK V +
Sbjct: 5 LKKGPF-VDHHLAKKVESAAGSKKP--IKTWSRRSMILPEMVGITIAVHNGKNHIPVLVN 61
Query: 112 PEMIGHYLGEFSVTYKPVKHG 50
M+GH LGEF+VT HG
Sbjct: 62 ENMVGHKLGEFAVTRTFKGHG 82
>UniRef50_A6S058 Cluster: Mitochondrial ribosome small subunit
component S19; n=2; Sclerotiniaceae|Rep: Mitochondrial
ribosome small subunit component S19 - Botryotinia
fuckeliana B05.10
Length = 93
Score = 53.6 bits (123), Expect = 2e-06
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = -3
Query: 211 VKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 65
++T R+ I+P VG I+NGK +N+V I +M+GH LGEFS T K
Sbjct: 35 IRTQARSATILPNFVGLTFEIHNGKVYNEVTITEDMVGHKLGEFSATRK 83
>UniRef50_UPI00015BD7EF Cluster: UPI00015BD7EF related cluster; n=1;
unknown|Rep: UPI00015BD7EF UniRef100 entry - unknown
Length = 153
Score = 53.2 bits (122), Expect = 3e-06
Identities = 21/49 (42%), Positives = 34/49 (69%)
Frame = -3
Query: 217 EIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 71
++VKT+ R+ ++ + V + ++NGKTF + I PEM+GH LGEF+ T
Sbjct: 88 KVVKTYSRDSQVISDFVNHTIAVHNGKTFVPIYITPEMVGHKLGEFAPT 136
>UniRef50_A6QU02 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 144
Score = 52.8 bits (121), Expect = 4e-06
Identities = 24/53 (45%), Positives = 32/53 (60%)
Frame = -3
Query: 235 PPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFS 77
PP +KT R+ I+P VG ++NGKT+N+V I EM+G LGEFS
Sbjct: 2 PPPPGTPAIKTQARSATILPNFVGLKFAVHNGKTYNEVFITDEMVGRKLGEFS 54
>UniRef50_Q9US30 Cluster: Probable mitochondrial ribosomal protein
S19; n=1; Schizosaccharomyces pombe|Rep: Probable
mitochondrial ribosomal protein S19 -
Schizosaccharomyces pombe (Fission yeast)
Length = 108
Score = 52.0 bits (119), Expect = 7e-06
Identities = 23/49 (46%), Positives = 35/49 (71%)
Frame = -3
Query: 211 VKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 65
+KT +R+ I+P MVG+ ++NGK++ V+I +MIGH LGEF+ T K
Sbjct: 50 IKTAVRSATILPRMVGAQFMVHNGKSYANVKITEDMIGHKLGEFAPTRK 98
>UniRef50_P56808 Cluster: Chloroplast 30S ribosomal protein S19;
n=326; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S19 - Arabidopsis thaliana (Mouse-ear cress)
Length = 92
Score = 51.6 bits (118), Expect = 1e-05
Identities = 30/74 (40%), Positives = 40/74 (54%)
Frame = -3
Query: 292 LKRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIK 113
LK+ P LR+ +K EK EI+ T R I+P M+G + I+NG+ V I
Sbjct: 5 LKKNPFVAKHLLRKIEKLNTKAEK-EIIITWSRASTIIPTMIGHTIAIHNGREHLPVYII 63
Query: 112 PEMIGHYLGEFSVT 71
M+GH LGEFS T
Sbjct: 64 DLMVGHKLGEFSPT 77
>UniRef50_P0A4B5 Cluster: 30S ribosomal protein S19; n=47;
Bacteria|Rep: 30S ribosomal protein S19 - Streptococcus
pneumoniae
Length = 93
Score = 51.2 bits (117), Expect = 1e-05
Identities = 24/74 (32%), Positives = 43/74 (58%)
Frame = -3
Query: 292 LKRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIK 113
LK+ P +++ + +A +EK +++KT R I P +G + +Y+G+ V I+
Sbjct: 5 LKKGPFVDEHLMKKVEAQAN-DEKKKVIKTWSRRSTIFPSFIGYTIAVYDGRKHVPVYIQ 63
Query: 112 PEMIGHYLGEFSVT 71
+M+GH LGEF+ T
Sbjct: 64 EDMVGHKLGEFAPT 77
>UniRef50_Q2GUS0 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 152
Score = 49.2 bits (112), Expect = 5e-05
Identities = 21/52 (40%), Positives = 32/52 (61%)
Frame = -3
Query: 232 PNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFS 77
P ++ ++T R+ I+P VG ++NGK ++ V I EM+GH LGEFS
Sbjct: 71 PGKRVAPIRTQARSATILPNFVGLKFQVHNGKVYHDVTITEEMVGHKLGEFS 122
>UniRef50_Q5GSU8 Cluster: Ribosomal protein S19; n=10;
Rickettsiales|Rep: Ribosomal protein S19 - Wolbachia sp.
subsp. Brugia malayi (strain TRS)
Length = 94
Score = 48.8 bits (111), Expect = 7e-05
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = -3
Query: 274 ALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPE-MIG 98
++++ + RA K+ N+ ++K H R +I+P +G +YNGK + V + + MIG
Sbjct: 14 SVLRLVNRALKQGSINK---VIKIHSRASVILPNCLGLKFAVYNGKDYIPVSVNDQNMIG 70
Query: 97 HYLGEFSVTYKPVKH 53
H GEFS T K H
Sbjct: 71 HKFGEFSPTRKFAGH 85
>UniRef50_Q8D208 Cluster: 30S ribosomal protein S19; n=14; cellular
organisms|Rep: 30S ribosomal protein S19 -
Wigglesworthia glossinidia brevipalpis
Length = 92
Score = 48.8 bits (111), Expect = 7e-05
Identities = 24/67 (35%), Positives = 38/67 (56%)
Frame = -3
Query: 271 LVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHY 92
L+KK+ K+ K ++++T R I P+M+G + ++NGK + I EM+GH
Sbjct: 15 LLKKIEEIKQTG----KKKLIRTWSRRSTIFPDMIGMTISVHNGKQHIPIFIGDEMVGHK 70
Query: 91 LGEFSVT 71
LGEF T
Sbjct: 71 LGEFVPT 77
>UniRef50_P0A7U6 Cluster: 30S ribosomal protein S19; n=263; cellular
organisms|Rep: 30S ribosomal protein S19 - Shigella
flexneri
Length = 92
Score = 48.8 bits (111), Expect = 7e-05
Identities = 24/74 (32%), Positives = 40/74 (54%)
Frame = -3
Query: 292 LKRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIK 113
LK+ P + L++ +K +K + +T R I P M+G + ++NG+ V +
Sbjct: 5 LKKGPFIDLHLLKKVEKAVESGDKKPL-RTWSRRSTIFPNMIGLTIAVHNGRQHVPVFVT 63
Query: 112 PEMIGHYLGEFSVT 71
EM+GH LGEF+ T
Sbjct: 64 DEMVGHKLGEFAPT 77
>UniRef50_Q8LWZ8 Cluster: Ribosomal protein S19; n=16;
stramenopiles|Rep: Ribosomal protein S19 - Laminaria
digitata
Length = 89
Score = 48.4 bits (110), Expect = 9e-05
Identities = 28/61 (45%), Positives = 33/61 (54%)
Frame = -3
Query: 247 KKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTY 68
K+ P +EK T R I P VG + IYNGK +IKPEM+GH LGEF T
Sbjct: 17 KRLTPEHEKKP---TWSRRSTIYPAAVGLKLQIYNGKDMISRKIKPEMVGHKLGEFVTTR 73
Query: 67 K 65
K
Sbjct: 74 K 74
>UniRef50_Q2EEV9 Cluster: Ribosomal protein S19; n=1;
Helicosporidium sp. ex Simulium jonesii|Rep: Ribosomal
protein S19 - Helicosporidium sp. subsp. Simulium
jonesii (Green alga)
Length = 117
Score = 48.4 bits (110), Expect = 9e-05
Identities = 28/74 (37%), Positives = 40/74 (54%)
Frame = -3
Query: 292 LKRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIK 113
L K + KL+R KK ++KT R+ IVP M+G I+ ++NG+ V I
Sbjct: 27 LTSKKQEKLVKLQRKKKII------SVIKTWSRSSTIVPLMIGEIIAVHNGREHIPVYIT 80
Query: 112 PEMIGHYLGEFSVT 71
EM+G LGEF+ T
Sbjct: 81 EEMVGFKLGEFATT 94
>UniRef50_Q6A6N0 Cluster: 30S ribosomal protein S19; n=75; cellular
organisms|Rep: 30S ribosomal protein S19 -
Propionibacterium acnes
Length = 93
Score = 48.4 bits (110), Expect = 9e-05
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = -3
Query: 250 AKKEAPPNEKP--EIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFS 77
AKK NE ++KT R ++ P+M+G +G+++G+ V + M+GH LGEF+
Sbjct: 16 AKKVTAQNEAGTHNVIKTWSRRSMVTPDMIGHTIGVHDGRKHVPVFVTESMVGHKLGEFA 75
Query: 76 VT 71
T
Sbjct: 76 PT 77
>UniRef50_P53733 Cluster: Mitochondrial 37S ribosomal protein S19;
n=16; Dikarya|Rep: Mitochondrial 37S ribosomal protein
S19 - Saccharomyces cerevisiae (Baker's yeast)
Length = 91
Score = 48.0 bits (109), Expect = 1e-04
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = -3
Query: 211 VKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 65
++T+ R I+P+ VG I+NGK + +EI +M+GH LGEF+ T K
Sbjct: 33 IRTNARAATILPQFVGLKFQIHNGKEYVPIEISEDMVGHKLGEFAPTRK 81
>UniRef50_P50893 Cluster: Mitochondrial ribosomal protein S19; n=3;
Chlorophyta|Rep: Mitochondrial ribosomal protein S19 -
Platymonas subcordiformis
Length = 83
Score = 48.0 bits (109), Expect = 1e-04
Identities = 21/52 (40%), Positives = 31/52 (59%)
Frame = -3
Query: 208 KTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKH 53
K + R ++ P+ +G V IYNG + ++IK +MIGH GEF+ T K H
Sbjct: 27 KIYSRRSVVSPKFIGREVEIYNGHKWITIKIKEDMIGHKFGEFAFTRKATIH 78
>UniRef50_Q9G868 Cluster: Ribosomal protein S19; n=2; Eukaryota|Rep:
Ribosomal protein S19 - Malawimonas jakobiformis
Length = 85
Score = 47.6 bits (108), Expect = 2e-04
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = -3
Query: 217 EIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 71
+I+K + R +I P+ + V IYNG F ++I MIGH GEFS+T
Sbjct: 22 KIIKIYSRRSVIYPQYLNKKVKIYNGNKFIPIKITDNMIGHKFGEFSLT 70
>UniRef50_Q6YR17 Cluster: 30S ribosomal protein S19; n=72; cellular
organisms|Rep: 30S ribosomal protein S19 - Onion yellows
phytoplasma
Length = 93
Score = 47.6 bits (108), Expect = 2e-04
Identities = 25/74 (33%), Positives = 40/74 (54%)
Frame = -3
Query: 292 LKRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIK 113
+K+ P+ L + +K+ K ++++T R+ I P VG + +YNG+ V I
Sbjct: 5 VKKGPIVASHLLAKIEKQKNLKNK-KVIQTWSRSSTITPIFVGHKIAVYNGREHIPVYIT 63
Query: 112 PEMIGHYLGEFSVT 71
M+GH LGEFS T
Sbjct: 64 ENMVGHKLGEFSPT 77
>UniRef50_A1DE43 Cluster: Mitochondrial ribosomal protein S19,
putative; n=2; Pezizomycotina|Rep: Mitochondrial
ribosomal protein S19, putative - Neosartorya fischeri
(strain ATCC 1020 / DSM 3700 / NRRL 181)(Aspergillus
fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
Length = 89
Score = 47.2 bits (107), Expect = 2e-04
Identities = 25/61 (40%), Positives = 33/61 (54%)
Frame = -3
Query: 247 KKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTY 68
+K PP P I KT R I+P VG ++NGKT+ V I +M+G LGE+ T
Sbjct: 20 RKLPPPPGTPPI-KTQKRGATILPNFVGLRFAVHNGKTYQDVLITEDMVGRKLGEYVPTR 78
Query: 67 K 65
K
Sbjct: 79 K 79
>UniRef50_P39697 Cluster: 40S ribosomal protein S19, mitochondrial
precursor; n=85; Streptophytina|Rep: 40S ribosomal
protein S19, mitochondrial precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 212
Score = 47.2 bits (107), Expect = 2e-04
Identities = 23/50 (46%), Positives = 29/50 (58%)
Frame = -3
Query: 196 RNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGR 47
R I+PE V S V IYNGKT + +I +GH GEF+ T K KH +
Sbjct: 161 RRSTILPEYVDSAVRIYNGKTHVRCKITEGKVGHKFGEFAFTRKVKKHAK 210
>UniRef50_P26874 Cluster: Mitochondrial ribosomal protein S19; n=7;
Eukaryota|Rep: Mitochondrial ribosomal protein S19 -
Marchantia polymorpha (Liverwort)
Length = 93
Score = 46.4 bits (105), Expect = 4e-04
Identities = 22/50 (44%), Positives = 29/50 (58%)
Frame = -3
Query: 196 RNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGR 47
R I+P+ VG IYNGK F ++I EM+GH GEF+ T K G+
Sbjct: 28 RRSCILPQFVGCYAQIYNGKGFVGLKITEEMVGHKFGEFASTRKTSSLGK 77
>UniRef50_A6YEB0 Cluster: Ribosomal protein S19; n=1; Chlorokybus
atmophyticus|Rep: Ribosomal protein S19 - Chlorokybus
atmophyticus (Soil alga)
Length = 130
Score = 46.0 bits (104), Expect = 5e-04
Identities = 22/48 (45%), Positives = 27/48 (56%)
Frame = -3
Query: 196 RNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKH 53
R I+P+ VG ++NGK F V I EMIGH GEF+ T K H
Sbjct: 76 RRSTILPDFVGQSFEVHNGKLFIPVRITEEMIGHKFGEFASTRKKPVH 123
>UniRef50_Q6CDN4 Cluster: Yarrowia lipolytica chromosome B of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome B of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 89
Score = 45.6 bits (103), Expect = 6e-04
Identities = 19/57 (33%), Positives = 34/57 (59%)
Frame = -3
Query: 223 KPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKH 53
K + ++T R I+P+ VG ++NGK + V + +M+G LGE++ T KP ++
Sbjct: 28 KKQPIQTDKRAATIIPQFVGVTFHVHNGKEYVPVNVTQDMVGTKLGEYAYTRKPFRY 84
>UniRef50_Q0CW10 Cluster: Putative uncharacterized protein; n=1;
Aspergillus terreus NIH2624|Rep: Putative
uncharacterized protein - Aspergillus terreus (strain
NIH 2624)
Length = 152
Score = 45.2 bits (102), Expect = 8e-04
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = -3
Query: 244 KEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEF 80
++ PP +KT R+ I+P VG ++NGK + V I EM+G LGE+
Sbjct: 25 RKLPPAPNTPPIKTQKRSATILPNFVGLRFSVHNGKNYQDVLITEEMVGRKLGEY 79
>UniRef50_Q9TAJ3 Cluster: Ribosomal protein S19; n=1; Cafeteria
roenbergensis|Rep: Ribosomal protein S19 - Cafeteria
roenbergensis
Length = 84
Score = 44.0 bits (99), Expect = 0.002
Identities = 21/61 (34%), Positives = 36/61 (59%)
Frame = -3
Query: 229 NEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHG 50
N+K I KT R I+P ++ VG+++G TF ++ M+G+ LGEF T + ++G
Sbjct: 23 NDKNVIYKTQARGSTILPLIMNINVGVHDGYTFFKLTPNASMVGYKLGEFVRTRQAFRYG 82
Query: 49 R 47
+
Sbjct: 83 K 83
>UniRef50_A6BM61 Cluster: Ribosomal protein S19; n=1; Gnetum
parvifolium|Rep: Ribosomal protein S19 - Gnetum
parvifolium
Length = 115
Score = 42.3 bits (95), Expect = 0.006
Identities = 25/67 (37%), Positives = 37/67 (55%)
Frame = -3
Query: 271 LVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHY 92
L+ K+ + K+ N+K +I+ T R IVPEMVG ++NGK V I M+
Sbjct: 31 LLTKIEKLKR----NKKQKIIITWSRASTIVPEMVGYTFAVHNGKEHLPVYITENMLYQK 86
Query: 91 LGEFSVT 71
LG+F+ T
Sbjct: 87 LGDFAPT 93
>UniRef50_Q6E790 Cluster: Ribosomal protein S19; n=6; Oomycetes|Rep:
Ribosomal protein S19 - Saprolegnia ferax
Length = 82
Score = 41.9 bits (94), Expect = 0.008
Identities = 17/55 (30%), Positives = 34/55 (61%)
Frame = -3
Query: 229 NEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 65
N + + +K +N++I+P+ + +YNG+ F +++I +M+G+ GEF T K
Sbjct: 17 NNQKKWIKIFNKNLVIMPQDIDLTFNVYNGQNFIKLKIVKDMLGYKFGEFINTRK 71
>UniRef50_P0C478 Cluster: Chloroplast 30S ribosomal protein S19;
n=54; Eukaryota|Rep: Chloroplast 30S ribosomal protein
S19 - Oryza sativa (Rice)
Length = 93
Score = 41.1 bits (92), Expect = 0.013
Identities = 27/73 (36%), Positives = 34/73 (46%)
Frame = -3
Query: 289 KRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKP 110
K P L + +K EK IV T R I+P MVG + I+NGK + I
Sbjct: 5 KTNPFVAHHLLAKIEKVNMKEEKETIV-TWSRASSILPAMVGHTIAIHNGKEHIPIYITN 63
Query: 109 EMIGHYLGEFSVT 71
M+G LGEF T
Sbjct: 64 PMVGRKLGEFVPT 76
>UniRef50_P34772 Cluster: Plastid 30S ribosomal protein S19; n=1;
Euglena longa|Rep: Plastid 30S ribosomal protein S19 -
Astasia longa (Euglenophycean alga)
Length = 118
Score = 41.1 bits (92), Expect = 0.013
Identities = 25/73 (34%), Positives = 35/73 (47%)
Frame = -3
Query: 289 KRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKP 110
K+ P + K N K ++V T R+ + P MVG + +YNGK + I
Sbjct: 6 KKSPFISYRLFNTIDKMNLKNLK-QLVFTKSRSSTVFPSMVGHNISVYNGKNYVPFLILN 64
Query: 109 EMIGHYLGEFSVT 71
+MI LGEFS T
Sbjct: 65 QMISSKLGEFSRT 77
>UniRef50_Q6UVU3 Cluster: Ribosomal protein S19; n=1;
Pseudendoclonium akinetum|Rep: Ribosomal protein S19 -
Pseudendoclonium akinetum (Green alga)
Length = 116
Score = 40.3 bits (90), Expect = 0.023
Identities = 18/49 (36%), Positives = 30/49 (61%)
Frame = -3
Query: 211 VKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 65
++ + R+ IVP M+G+ V I+ G F ++ I +G+ LGEF+ T K
Sbjct: 58 IQVYQRSSTIVPGMIGNTVKIHTGHKFVKLSITEHTVGYKLGEFAPTKK 106
>UniRef50_Q06FM4 Cluster: Ribosomal protein S19; n=1; Pelargonium x
hortorum|Rep: Ribosomal protein S19 - Pelargonium
hortorum (Common geranium)
Length = 124
Score = 39.9 bits (89), Expect = 0.031
Identities = 27/95 (28%), Positives = 44/95 (46%)
Frame = -3
Query: 292 LKRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIK 113
+KR P L++ +K +K + +KT R I+P M+G + I+NG+ + I
Sbjct: 16 VKRNPFVANPLLKKIEKLNAKAQK-DFLKTWSRASTIIPAMIGYTIYIHNGREHVPIPIT 74
Query: 112 PEMIGHYLGEFSVTYKPVKHGRPGIGATHSXKVHS 8
M+ + LG+F T +H T S K S
Sbjct: 75 KYMVNYKLGDFVPTRIFNQHNSKKKSDTKSVKSKS 109
>UniRef50_Q23889 Cluster: Ribosomal protein S19; n=2;
Dictyosteliida|Rep: Ribosomal protein S19 -
Dictyostelium discoideum (Slime mold)
Length = 87
Score = 39.9 bits (89), Expect = 0.031
Identities = 21/60 (35%), Positives = 34/60 (56%)
Frame = -3
Query: 220 PEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPG 41
P IV T R+ +IVP + + +YNG+ + V+I + +G LGE+ +T K K+ G
Sbjct: 24 PTIVTTE-RSSVIVPYYLTKTIYVYNGRKYVGVKITEKSLGRKLGEYVLTKKVEKYKASG 82
>UniRef50_A7QBJ9 Cluster: Chromosome chr13 scaffold_74, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr13 scaffold_74, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 101
Score = 39.5 bits (88), Expect = 0.041
Identities = 25/75 (33%), Positives = 36/75 (48%)
Frame = -3
Query: 295 GLKRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEI 116
G K+ P LR+ EK EI+ T R I++P M+G + I+NG + I
Sbjct: 13 GEKKGPFIAKNLLRKIVMLNTMWEK-EIIVTWSRTSIVIPTMIGHTITIHNGNEHLLIYI 71
Query: 115 KPEMIGHYLGEFSVT 71
M+ H L +FS T
Sbjct: 72 TDCMVDHKLAKFSST 86
>UniRef50_Q0QIR8 Cluster: Ribosomal protein S19; n=1;
Oltmannsiellopsis viridis|Rep: Ribosomal protein S19 -
Oltmannsiellopsis viridis (Marine flagellate)
Length = 78
Score = 39.1 bits (87), Expect = 0.054
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = -3
Query: 196 RNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 65
R+ I+P +V I+NGK F + + E IGH GEF+ T K
Sbjct: 28 RDSTILPSLVNKQYKIFNGKRFIRFRVTEETIGHKFGEFASTRK 71
>UniRef50_A2DH24 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 89
Score = 35.1 bits (77), Expect = 0.88
Identities = 18/66 (27%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Frame = +2
Query: 80 ELSEVMADHLRLDFNLVKSFSVVNADN*TDHLGNDDHVSQVSLHDLWLLIRRSL--FLGA 253
++S+ +A+H LD N ++ + ++AD + D+H+++V L + W+ + +L
Sbjct: 17 DISKNVANHFWLDLNFEENVANIDADIYINKFWKDNHIAEVCLDNWWMNVCLALNSLTSL 76
Query: 254 TQLLDQ 271
QLLD+
Sbjct: 77 LQLLDK 82
>UniRef50_Q4CAU9 Cluster: Putative uncharacterized protein; n=1;
Crocosphaera watsonii WH 8501|Rep: Putative
uncharacterized protein - Crocosphaera watsonii
Length = 216
Score = 34.7 bits (76), Expect = 1.2
Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Frame = -3
Query: 379 VDLDQLLDMPNEQLMEL-----MHXXXXXXXXRGLKRKPMALVKKLRRAKKEAPPNEKPE 215
++L+++L P E ++ L +K + A ++L++ K NE+
Sbjct: 112 IELEKVLAYPEEIILSLTVLLPFRECSGNSTGDSIKEEIKAFKRELKKKLKRFYHNEQKR 171
Query: 214 IVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHY 92
+VK L N+ I+PE VGS++ N ++ + + I M+GH+
Sbjct: 172 VVK--LENIKILPEGVGSLMCSSNQESTSTIVI---MLGHW 207
>UniRef50_Q6HT65 Cluster: ComE operon protein 1; n=22; Bacillus|Rep:
ComE operon protein 1 - Bacillus anthracis
Length = 199
Score = 34.3 bits (75), Expect = 1.5
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = -3
Query: 244 KEAPPNEKPEIVKTHLRNMIIVPEMVGSIV--GIYNGKTFNQVEIKPEMIGHYLGE 83
KE KP+I T L+ IIV +M G++V G+Y K ++V+ E G +L E
Sbjct: 43 KEIEKKSKPKISDTKLQKKIIVIDMKGAVVKEGVYEMKEGDRVKDAIEKAGGFLPE 98
>UniRef50_Q9G8T6 Cluster: Ribosomal protein S19; n=1; Rhodomonas
salina|Rep: Ribosomal protein S19 - Rhodomonas salina
(Cryptomonas salina)
Length = 72
Score = 34.3 bits (75), Expect = 1.5
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = -3
Query: 229 NEKPEIVKTHLRNMIIVPEMVGSIVGIYNGK-TFNQVEIKPEMIGHYLGEFSVTYK 65
N + +K RN I P +G + NG+ + +++I +M+G +GEF +T K
Sbjct: 15 NSAEKELKIISRNTTIFPSFIGKYFLVKNGENSLRKIQISVDMVGLKIGEFVITKK 70
>UniRef50_A7QLC7 Cluster: Chromosome chr11 scaffold_118, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_118, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 86
Score = 34.3 bits (75), Expect = 1.5
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = +2
Query: 221 LLIRRSLFLGATQLLDQCHWFTFKTTSEPPARTGMH*FHELLIGHIKELIEINSPVSELP 400
LL R L +L DQ + +++ EP + G+ +L+ GH ++ I+I++ ELP
Sbjct: 18 LLTRWGLTFRLAKLFDQGRGLSLQSSLEPSSSIGVTELDKLINGHAEKCIQIDTLEVELP 77
Query: 401 E 403
E
Sbjct: 78 E 78
>UniRef50_Q8IB15 Cluster: Putative uncharacterized protein
MAL8P1.71; n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein MAL8P1.71 - Plasmodium
falciparum (isolate 3D7)
Length = 372
Score = 33.5 bits (73), Expect = 2.7
Identities = 23/61 (37%), Positives = 28/61 (45%)
Frame = -2
Query: 254 SRQERGSSE*EARDREDSLEKHDHRSRDGRFNCRHLQRKNF*PG*NQA*DDRPLPRRVLS 75
SR + R+R SLEKH HR RD + RH R+ DDR RR LS
Sbjct: 144 SRSRERNKHRSGRNRSRSLEKHRHRRRDSHRH-RHDDRRRSRSRDKYRHDDRHRSRRRLS 202
Query: 74 H 72
+
Sbjct: 203 Y 203
>UniRef50_Q8HIT4 Cluster: Ribosomal protein S19; n=1; Monosiga
brevicollis|Rep: Ribosomal protein S19 - Monosiga
brevicollis
Length = 77
Score = 32.7 bits (71), Expect = 4.7
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = -3
Query: 196 RNMIIVPEMVGSIVGIYNGKTFNQVEIKPEM--IGHYLGEFSVTYKPVKHGR 47
RN+ I PE V + I G + V+I + IGH GEF+V+ P + R
Sbjct: 21 RNITITPEDVNKNINIETGNSKKSVKINVTIKHIGHKTGEFAVSKIPAVYKR 72
>UniRef50_Q7YN78 Cluster: Ribosomal protein S19; n=1; Eimeria
tenella|Rep: Ribosomal protein S19 - Eimeria tenella
Length = 88
Score = 32.7 bits (71), Expect = 4.7
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -3
Query: 208 KTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEF 80
KT+ + +I+P + I+ IYNGK + + I + IG L F
Sbjct: 27 KTNNNSTLILPLFLWKIIEIYNGKRYIPININKKKIGFILKNF 69
>UniRef50_Q7LYZ0 Cluster: Gag polyprotein; n=1; Human endogenous
retrovirus S71|Rep: Gag polyprotein - Human endogenous
retrovirus S71
Length = 608
Score = 32.3 bits (70), Expect = 6.2
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Frame = -3
Query: 415 KKRIFRKFTYRGVDLDQLLDMP----NEQLMELMHXXXXXXXXRGLKRKPMALVKKLRRA 248
+K++ + + G+++ QLL++ + Q E KR+P LV +R A
Sbjct: 374 RKKLQKLEGFAGMNISQLLEVAQRIFDSQEFEKQKQAAEKAADETSKRQPKILVVAIREA 433
Query: 247 KKEAPPNE 224
+KE PP++
Sbjct: 434 RKEGPPSQ 441
>UniRef50_Q9MTE4 Cluster: Ribosomal protein S19; n=1; Toxoplasma
gondii|Rep: Ribosomal protein S19 - Toxoplasma gondii
Length = 70
Score = 32.3 bits (70), Expect = 6.2
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = -3
Query: 211 VKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEF 80
+K + + +II P ++ ++ +Y GK+F + I + IG L F
Sbjct: 26 IKLYYKYLIITPFLIWKLMEVYTGKSFITINITKDKIGRSLQYF 69
>UniRef50_Q54WU0 Cluster: Putative basic-leucine zipper (BZIP)
transcription factor; n=1; Dictyostelium discoideum
AX4|Rep: Putative basic-leucine zipper (BZIP)
transcription factor - Dictyostelium discoideum AX4
Length = 804
Score = 31.9 bits (69), Expect = 8.2
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = -3
Query: 430 DETLKKKRIFRKFTYRGVDL-DQLLDMPNEQLMELMHXXXXXXXXRGLKRKPMALVKKLR 254
D+ KK++ F K Y+GVDL D+LL++ +E+ + K+ AL + R
Sbjct: 365 DDRPKKRKKFDKNVYKGVDLGDELLEITSEEFQAYKNNFFANASD---KKTVSALNYQFR 421
Query: 253 RAKKEAPPNEKPEIVKTHL 197
+ K E TH+
Sbjct: 422 KIKNRESARRSRERKATHV 440
>UniRef50_Q6FLN2 Cluster: Similar to sp|P18480 Saccharomyces
cerevisiae YBR289w SNF5; n=1; Candida glabrata|Rep:
Similar to sp|P18480 Saccharomyces cerevisiae YBR289w
SNF5 - Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 1030
Score = 31.9 bits (69), Expect = 8.2
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +2
Query: 182 DDHVSQVSLHDLWLLIRRSLFLGATQLLDQCHW 280
++H+S++ D+ + I+ + +G TQL+DQ W
Sbjct: 493 EEHLSRIGGDDMRITIKLDIVVGQTQLIDQFEW 525
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 469,871,104
Number of Sequences: 1657284
Number of extensions: 8721441
Number of successful extensions: 23925
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 23165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23902
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29273652170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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