Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_O17
         (469 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    25   0.46 
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    22   2.5  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   7.5  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   7.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.5  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       20   9.9  

>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 24.6 bits (51), Expect = 0.46
 Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
 Frame = +3

Query: 15  FNFSSLXISACFAASL----SKTKLL*FSGHL 98
           F F +L ISAC+A  +    SK+KLL   GH+
Sbjct: 215 FVFPALIISACYAVIVRTIWSKSKLLIPVGHI 246


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -2

Query: 153 GQKSLFHNPHVNALPSGYEDDH 88
           G + L H+PH+N     Y  +H
Sbjct: 35  GLQGLHHSPHLNHAMHPYHANH 56


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 5/12 (41%), Positives = 11/12 (91%)
 Frame = +1

Query: 70  QNYCNLVVIFIT 105
           Q YC+++++F+T
Sbjct: 74  QRYCSVLLVFLT 85


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 5/12 (41%), Positives = 11/12 (91%)
 Frame = +1

Query: 70  QNYCNLVVIFIT 105
           Q YC+++++F+T
Sbjct: 70  QRYCSVLLVFLT 81


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 11/42 (26%), Positives = 18/42 (42%)
 Frame = +3

Query: 129 GCGKGTSVHHPMGNALYECACIHKVQMADVHGVPLGELSRHL 254
           G G G+  + P G      + +   ++ D     L ELS H+
Sbjct: 526 GGGSGSGNNQPPGGPSSHVSAVLTCKVCDQAFSSLKELSNHM 567


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = -2

Query: 162 WGDGQKSLFHNPH 124
           WGDG K   H  H
Sbjct: 83  WGDGDKHDRHERH 95


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,688
Number of Sequences: 336
Number of extensions: 2211
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10826639
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)