Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_O16
(437 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6YPG5 Cluster: 40S ribosomal protein S11; n=7; Eukaryo... 190 1e-47
UniRef50_P62280 Cluster: 40S ribosomal protein S11; n=65; Eukary... 186 2e-46
UniRef50_P26781 Cluster: 40S ribosomal protein S11; n=73; Eukary... 159 2e-38
UniRef50_P79013 Cluster: 40S ribosomal protein S11; n=2; Dikarya... 154 9e-37
UniRef50_A0BVQ1 Cluster: Chromosome undetermined scaffold_130, w... 149 2e-35
UniRef50_Q9U9A0 Cluster: Putative ribosomal protein S11; n=8; Eu... 137 8e-32
UniRef50_Q7XLC9 Cluster: OSJNBa0070C17.20 protein; n=11; Eukaryo... 130 2e-29
UniRef50_Q4QCN7 Cluster: Ribosomal protein s11 homolog; n=16; Eu... 125 4e-28
UniRef50_Q15GB4 Cluster: 60S ribosomal protein 11; n=1; Rhodomon... 119 2e-26
UniRef50_Q8SS53 Cluster: 40S RIBOSOMAL PROTEIN S11; n=1; Encepha... 111 6e-24
UniRef50_Q42068 Cluster: Ribosomal protein 40S-S11; n=1; Arabido... 100 2e-20
UniRef50_Q3LW88 Cluster: Ribosomal protein S11; n=1; Bigelowiell... 88 9e-17
UniRef50_Q8TW21 Cluster: 30S ribosomal protein S17P; n=24; Archa... 76 4e-13
UniRef50_Q2QAS1 Cluster: Ribosomal protein S17; n=2; environment... 69 6e-11
UniRef50_Q8PV41 Cluster: 30S ribosomal protein S17P; n=5; Methan... 67 1e-10
UniRef50_P12741 Cluster: 30S ribosomal protein S17P; n=8; Euryar... 64 9e-10
UniRef50_A3H7C0 Cluster: Ribosomal protein S17; n=4; Thermoprote... 63 2e-09
UniRef50_Q9HIR8 Cluster: 30S ribosomal protein S17P; n=3; Euryar... 63 2e-09
UniRef50_Q9YF81 Cluster: 30S ribosomal protein S17P; n=4; Thermo... 63 3e-09
UniRef50_Q8ZWL3 Cluster: 30S ribosomal protein S17P; n=3; Pyroba... 61 9e-09
UniRef50_A1RXG3 Cluster: Ribosomal protein S17; n=1; Thermofilum... 54 1e-06
UniRef50_Q59NQ3 Cluster: Putative uncharacterized protein; n=1; ... 52 5e-06
UniRef50_Q8TP90 Cluster: Putative 30S ribosomal protein S17P-lik... 51 9e-06
UniRef50_Q74NJ4 Cluster: 30S ribosomal protein S17P; n=1; Nanoar... 50 3e-05
UniRef50_A0RVY2 Cluster: Ribosomal protein S17; n=2; Thermoprote... 48 9e-05
UniRef50_UPI0000D9F1CD Cluster: PREDICTED: similar to ribosomal ... 38 0.12
UniRef50_Q6C8W4 Cluster: Patatin-like phospholipase domain-conta... 36 0.38
UniRef50_UPI00006CFC97 Cluster: ribosomal protein S17 containing... 35 0.87
UniRef50_UPI00001F8C9C Cluster: PREDICTED: hypothetical protein;... 34 1.5
UniRef50_A4M9T1 Cluster: 30S ribosomal protein S17; n=2; Bacteri... 34 1.5
UniRef50_Q233G5 Cluster: Putative uncharacterized protein; n=1; ... 33 2.7
UniRef50_Q97ZH0 Cluster: N(2),N(2)-dimethylguanosine tRNA methyl... 33 2.7
UniRef50_UPI0000F1F889 Cluster: PREDICTED: similar to breast can... 33 3.5
UniRef50_Q4HSD8 Cluster: Putative uncharacterized protein; n=1; ... 32 4.7
UniRef50_Q7WZS8 Cluster: 30S ribosomal protein S17; n=1; Candida... 32 6.2
UniRef50_Q0F227 Cluster: Ion transport protein; n=1; Mariprofund... 32 6.2
UniRef50_Q9VHN4 Cluster: CG8043-PA; n=3; Sophophora|Rep: CG8043-... 32 6.2
UniRef50_Q899R5 Cluster: Conserved protein; n=11; Clostridium|Re... 31 8.1
UniRef50_Q9VUL6 Cluster: CG12316-PA, isoform A; n=2; Sophophora|... 31 8.1
UniRef50_P38519 Cluster: 30S ribosomal protein S17; n=7; Bacteri... 31 8.1
>UniRef50_A6YPG5 Cluster: 40S ribosomal protein S11; n=7;
Eukaryota|Rep: 40S ribosomal protein S11 - Triatoma
infestans (Assassin bug)
Length = 194
Score = 190 bits (463), Expect = 1e-47
Identities = 92/114 (80%), Positives = 98/114 (85%)
Frame = -1
Query: 416 LSSKMADQTEKAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPF 237
L K +TEKAFQKQ VFL K K K +R +K+VGLGFKTPREAIEGTYIDKKCPF
Sbjct: 40 LGFKTPRETEKAFQKQPHVFLASKVSSK-KPLRRYKSVGLGFKTPREAIEGTYIDKKCPF 98
Query: 236 TGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 75
TGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPC
Sbjct: 99 TGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYVRKYNRFEKRHKNMSVHLSPC 152
Score = 62.5 bits (145), Expect = 4e-09
Identities = 30/47 (63%), Positives = 37/47 (78%), Gaps = 4/47 (8%)
Frame = -1
Query: 404 MADQTEKAFQKQATVFLNRKGGM----KRKDMRHHKNVGLGFKTPRE 276
MADQTE++FQKQ T+FLNRK G+ K +R+ +NVGLGFKTPRE
Sbjct: 1 MADQTERSFQKQPTIFLNRKKGLGVKKKANALRYIRNVGLGFKTPRE 47
Score = 43.6 bits (98), Expect = 0.002
Identities = 17/20 (85%), Positives = 20/20 (100%)
Frame = -2
Query: 70 RDVEIGDIVTIGECRPLAKT 11
RDVEIGD+VT+GECRPL+KT
Sbjct: 154 RDVEIGDVVTVGECRPLSKT 173
>UniRef50_P62280 Cluster: 40S ribosomal protein S11; n=65;
Eukaryota|Rep: 40S ribosomal protein S11 - Homo sapiens
(Human)
Length = 158
Score = 186 bits (452), Expect = 2e-46
Identities = 89/116 (76%), Positives = 101/116 (87%), Gaps = 6/116 (5%)
Frame = -1
Query: 404 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 243
MAD QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 242 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 75
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPC
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPC 116
Score = 42.7 bits (96), Expect = 0.003
Identities = 17/20 (85%), Positives = 20/20 (100%)
Frame = -2
Query: 70 RDVEIGDIVTIGECRPLAKT 11
RDV+IGDIVT+GECRPL+KT
Sbjct: 118 RDVQIGDIVTVGECRPLSKT 137
>UniRef50_P26781 Cluster: 40S ribosomal protein S11; n=73;
Eukaryota|Rep: 40S ribosomal protein S11 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 156
Score = 159 bits (387), Expect = 2e-38
Identities = 72/113 (63%), Positives = 90/113 (79%)
Frame = -1
Query: 416 LSSKMADQTEKAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPF 237
+S+++ Q+E+AFQKQ +F N K ++ R +KN GLGFKTP+ AIEG+YIDKKCPF
Sbjct: 1 MSTELTVQSERAFQKQPHIFNNPKVKTSKRTKRWYKNAGLGFKTPKTAIEGSYIDKKCPF 60
Query: 236 TGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSP 78
TG VSIRG+ILTG V KM RTIVIRR YLHY+PKYNR+EKRH+N+ VH+SP
Sbjct: 61 TGLVSIRGKILTGTVVSTKMHRTIVIRRAYLHYIPKYNRYEKRHKNVPVHVSP 113
Score = 35.9 bits (79), Expect = 0.38
Identities = 12/18 (66%), Positives = 18/18 (100%)
Frame = -2
Query: 64 VEIGDIVTIGECRPLAKT 11
V++GDIVT+G+CRP++KT
Sbjct: 117 VQVGDIVTVGQCRPISKT 134
>UniRef50_P79013 Cluster: 40S ribosomal protein S11; n=2;
Dikarya|Rep: 40S ribosomal protein S11 -
Schizosaccharomyces pombe (Fission yeast)
Length = 152
Score = 154 bits (373), Expect = 9e-37
Identities = 71/121 (58%), Positives = 92/121 (76%), Gaps = 1/121 (0%)
Frame = -1
Query: 416 LSSKMADQTEKAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPF 237
+++++ Q+E+AFQKQ +F N K G R R +K+VGLGFKTP EAI G Y+DKKCPF
Sbjct: 1 MATELVVQSERAFQKQPHIFQNAKKGAGR---RWYKDVGLGFKTPAEAIYGEYVDKKCPF 57
Query: 236 TGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCXQ-GRG 60
G VSIRGRILTG V KM RTI+IRR+YLH++PKYNR+EKRH+N++ H+SP + G
Sbjct: 58 VGQVSIRGRILTGTVVSTKMHRTIIIRREYLHFIPKYNRYEKRHKNLAAHVSPAFRINEG 117
Query: 59 D 57
D
Sbjct: 118 D 118
Score = 32.7 bits (71), Expect = 3.5
Identities = 11/15 (73%), Positives = 15/15 (100%)
Frame = -2
Query: 55 GDIVTIGECRPLAKT 11
GD+VT+G+CRPL+KT
Sbjct: 117 GDVVTVGQCRPLSKT 131
>UniRef50_A0BVQ1 Cluster: Chromosome undetermined scaffold_130,
whole genome shotgun sequence; n=18; Eukaryota|Rep:
Chromosome undetermined scaffold_130, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 188
Score = 149 bits (362), Expect = 2e-35
Identities = 68/109 (62%), Positives = 85/109 (77%), Gaps = 3/109 (2%)
Frame = -1
Query: 395 QTEKAFQKQATVFLNRKGGMKRKD---MRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNV 225
+ ++AFQKQ +F N K + +K +R+ K VGLGFK P++AIEG YIDKKCPFTGNV
Sbjct: 34 KNQRAFQKQEGIFQNSKKLLAKKTSKGVRYWKEVGLGFKVPKDAIEGNYIDKKCPFTGNV 93
Query: 224 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSP 78
S+RG IL G+V KM RTI+IRRDYLHY+ KYNR+EKRHRN+ VH+SP
Sbjct: 94 SVRGAILKGIVISTKMTRTIIIRRDYLHYVAKYNRYEKRHRNVPVHISP 142
>UniRef50_Q9U9A0 Cluster: Putative ribosomal protein S11; n=8;
Eukaryota|Rep: Putative ribosomal protein S11 - Physarum
polycephalum (Slime mold)
Length = 158
Score = 137 bits (332), Expect = 8e-32
Identities = 64/111 (57%), Positives = 83/111 (74%), Gaps = 5/111 (4%)
Frame = -1
Query: 395 QTEKAFQKQATVFLNRKG----GMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGN 228
QT +QKQ +F+ +K +K+ D R+ + VGLG+KTP+ A+EGT++D KCPFTGN
Sbjct: 6 QTGLFYQKQKPIFVGKKRLLGLKLKKSDTRYVRQVGLGYKTPKAALEGTFVDDKCPFTGN 65
Query: 227 VSIRGRILTGVVQKM-KMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSP 78
VSIRGRIL GVV KM+RT+V+RR+YLHY+ KY R+EKRH N SVH SP
Sbjct: 66 VSIRGRILRGVVVSAGKMKRTVVVRRNYLHYIQKYKRYEKRHTNFSVHCSP 116
Score = 35.5 bits (78), Expect = 0.50
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = -2
Query: 67 DVEIGDIVTIGECRPLAKT 11
DV+ GD VT+GECRPL+KT
Sbjct: 119 DVKEGDTVTVGECRPLSKT 137
>UniRef50_Q7XLC9 Cluster: OSJNBa0070C17.20 protein; n=11;
Eukaryota|Rep: OSJNBa0070C17.20 protein - Oryza sativa
subsp. japonica (Rice)
Length = 185
Score = 130 bits (313), Expect = 2e-29
Identities = 72/139 (51%), Positives = 87/139 (62%), Gaps = 29/139 (20%)
Frame = -1
Query: 404 MADQTEKAFQKQATVFLN-RKGGMKRKD----MRHHKNVGLGFKTPREAIEGTYIDKKCP 240
MA+QTEKAF KQ VFL+ +K G +K R K++GLGFKTPREAIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
Query: 239 FTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYN--------------------- 123
FTG VSIRGRI+ G KM RTI++RR+YLH++ KY
Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQVNNYGFYLCFFSFFFPISD 120
Query: 122 ---RFEKRHRNMSVHLSPC 75
R+EKRH N+ H+SPC
Sbjct: 121 LGCRYEKRHSNIPAHVSPC 139
>UniRef50_Q4QCN7 Cluster: Ribosomal protein s11 homolog; n=16;
Eukaryota|Rep: Ribosomal protein s11 homolog -
Leishmania major
Length = 141
Score = 125 bits (302), Expect = 4e-28
Identities = 54/92 (58%), Positives = 71/92 (77%)
Frame = -1
Query: 353 NRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQ 174
+RK K +R+ K +GLGFKTP +A+ G YID+KCPFT NV IRGRIL GVV KM
Sbjct: 5 SRKHVNKSGHIRYSKKIGLGFKTPAKALNGKYIDRKCPFTSNVVIRGRILRGVVHSTKMH 64
Query: 173 RTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSP 78
RTI+IRR+YLH++ KY R++KRH++++VH SP
Sbjct: 65 RTIIIRRNYLHFIKKYQRYQKRHKSLAVHCSP 96
>UniRef50_Q15GB4 Cluster: 60S ribosomal protein 11; n=1; Rhodomonas
salina|Rep: 60S ribosomal protein 11 - Rhodomonas salina
(Cryptomonas salina)
Length = 145
Score = 119 bits (287), Expect = 2e-26
Identities = 50/88 (56%), Positives = 63/88 (71%)
Frame = -1
Query: 338 MKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVI 159
+ +K KN+G+G K P EAI Y DKKCPF G +SIRGRIL G V KM+R+++I
Sbjct: 16 LTKKKKNSFKNIGMGLKAPLEAINNNYFDKKCPFRGLISIRGRILRGTVISTKMKRSVII 75
Query: 158 RRDYLHYLPKYNRFEKRHRNMSVHLSPC 75
RRDYLH++ KY RFEKRH+N+ H SPC
Sbjct: 76 RRDYLHWISKYKRFEKRHKNIPCHCSPC 103
Score = 38.3 bits (85), Expect = 0.071
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = -2
Query: 94 PCICRLAXRDVEIGDIVTIGECRPLAKT 11
PC C R V+ GD+VTIG+CRPL+KT
Sbjct: 97 PCHCSPCFR-VQEGDLVTIGQCRPLSKT 123
>UniRef50_Q8SS53 Cluster: 40S RIBOSOMAL PROTEIN S11; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S11
- Encephalitozoon cuniculi
Length = 156
Score = 111 bits (267), Expect = 6e-24
Identities = 53/121 (43%), Positives = 71/121 (58%), Gaps = 3/121 (2%)
Frame = -1
Query: 386 KAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRI 207
K F +Q V + + R GFK P A YIDKKCPFTG+V++RGR+
Sbjct: 8 KVFPRQTGVCAKPYASHEEQPKRRVNAEVCGFKAPETAYTRQYIDKKCPFTGDVNVRGRL 67
Query: 206 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCXQGR---GDW*YCNDR 36
GVV+KMK ++TIV+ +Y+HY KY R+ +RH N SVH+SPC +G GD C +
Sbjct: 68 FKGVVKKMKAEKTIVVVANYVHYSKKYKRYSRRHTNFSVHMSPCFEGMINVGDTVICGET 127
Query: 35 R 33
R
Sbjct: 128 R 128
>UniRef50_Q42068 Cluster: Ribosomal protein 40S-S11; n=1;
Arabidopsis thaliana|Rep: Ribosomal protein 40S-S11 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 103
Score = 100 bits (239), Expect = 2e-20
Identities = 50/98 (51%), Positives = 64/98 (65%), Gaps = 3/98 (3%)
Frame = -1
Query: 419 SLSSKMADQTEKAFQKQATVFLNRK---GGMKRKDMRHHKNVGLGFKTPREAIEGTYIDK 249
S +S M ++ K F L R+ G K R KN+GLGFKTPREAI+G Y+DK
Sbjct: 6 SSTSAMGNRLRKLFLSSLRSSLARRNLEGKRPGKVERFWKNIGLGFKTPREAIDGAYVDK 65
Query: 248 KCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYL 135
KCPFTG VSIRGRIL + + +MQ TI++ RDYLH++
Sbjct: 66 KCPFTGTVSIRGRILVWYLPQCEMQSTIIVARDYLHFV 103
>UniRef50_Q3LW88 Cluster: Ribosomal protein S11; n=1; Bigelowiella
natans|Rep: Ribosomal protein S11 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 119
Score = 87.8 bits (208), Expect = 9e-17
Identities = 37/59 (62%), Positives = 48/59 (81%)
Frame = -1
Query: 257 IDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLS 81
IDKKCPF G +++RGRIL G V+K+KM+ T++IR DYL +L KYNRF KRH+N+ HLS
Sbjct: 23 IDKKCPFYGKINLRGRILRGKVRKIKMKSTVIIRIDYLKFLKKYNRFVKRHKNIPAHLS 81
>UniRef50_Q8TW21 Cluster: 30S ribosomal protein S17P; n=24;
Archaea|Rep: 30S ribosomal protein S17P - Methanopyrus
kandleri
Length = 118
Score = 75.8 bits (178), Expect = 4e-13
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Frame = -1
Query: 326 DMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDY 147
+ R K++GLG K PR + D CPF GN+ +RG IL GVV +M +T+++ R+Y
Sbjct: 4 EYRMAKDIGLGVKPPRRECD----DPNCPFHGNLRVRGMILEGVVVSDRMDKTVIVEREY 59
Query: 146 LHYLPKYNRFEKRHRNMSVHLSPCXQGR-GD 57
Y KY R+E+R + H PC + GD
Sbjct: 60 YRYDRKYERWERRRSRIPAHNPPCIDAQEGD 90
>UniRef50_Q2QAS1 Cluster: Ribosomal protein S17; n=2; environmental
samples|Rep: Ribosomal protein S17 - uncultured marine
group II euryarchaeote HF70_59C08
Length = 111
Score = 68.5 bits (160), Expect = 6e-11
Identities = 24/60 (40%), Positives = 43/60 (71%)
Frame = -1
Query: 254 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 75
D+ CPF G++ +RG+I+ G + K+ MQ++I++ R+++ Y+ K+ R+EKR R + HL C
Sbjct: 19 DENCPFYGSLRLRGQIIEGTIAKVGMQKSIIVEREHIRYMQKFERYEKRTRRYAAHLPSC 78
Score = 31.5 bits (68), Expect = 8.1
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -2
Query: 67 DVEIGDIVTIGECRPLAKT 11
DV +GD V I ECRPL+KT
Sbjct: 81 DVNVGDSVRIMECRPLSKT 99
>UniRef50_Q8PV41 Cluster: 30S ribosomal protein S17P; n=5;
Methanomicrobia|Rep: 30S ribosomal protein S17P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 109
Score = 67.3 bits (157), Expect = 1e-10
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = -1
Query: 311 KNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLP 132
+++GL P E + Y CPF G + +RG+IL G V KM T+VI R Y+ +
Sbjct: 3 RDIGLNIPAPSEECDDAY----CPFHGTLPVRGQILVGTVVSSKMDNTVVIERQYMKMVS 58
Query: 131 KYNRFEKRHRNMSVHLSPCXQGR-GD 57
KY R+EKR + H C + GD
Sbjct: 59 KYQRYEKRRSKIHAHNPACISAKVGD 84
Score = 31.9 bits (69), Expect = 6.2
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = -2
Query: 61 EIGDIVTIGECRPLAKT 11
++GDIVTI ECRP++KT
Sbjct: 81 KVGDIVTIVECRPISKT 97
>UniRef50_P12741 Cluster: 30S ribosomal protein S17P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S17P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 112
Score = 64.5 bits (150), Expect = 9e-10
Identities = 30/77 (38%), Positives = 44/77 (57%)
Frame = -1
Query: 305 VGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKY 126
+GL + P E T D+ CPF G +S+RG+ L G V M++T+V+ R+Y +PKY
Sbjct: 3 LGLNVQEPEE----TCADQNCPFHGELSVRGQTLNGEVASTDMEKTVVVEREYDVKVPKY 58
Query: 125 NRFEKRHRNMSVHLSPC 75
+RF KR + H C
Sbjct: 59 DRFMKRRSRVPAHAPDC 75
Score = 33.9 bits (74), Expect = 1.5
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -2
Query: 67 DVEIGDIVTIGECRPLAKT 11
D+ +GD VTI ECRPL+KT
Sbjct: 77 DLAVGDTVTIAECRPLSKT 95
>UniRef50_A3H7C0 Cluster: Ribosomal protein S17; n=4;
Thermoprotei|Rep: Ribosomal protein S17 - Caldivirga
maquilingensis IC-167
Length = 152
Score = 63.3 bits (147), Expect = 2e-09
Identities = 30/79 (37%), Positives = 50/79 (63%)
Frame = -1
Query: 311 KNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLP 132
+++G+ + P +A+ D KCP+ G+V +RG IL G V + M + +VI+ ++LHY P
Sbjct: 32 RHIGVPWLLPPKAVCN---DDKCPWHGHVKVRGTILEGRVVSVYMGQ-VVIQHEWLHYSP 87
Query: 131 KYNRFEKRHRNMSVHLSPC 75
KY R+ ++ RN+ HL C
Sbjct: 88 KYKRYIRKRRNIHAHLPSC 106
>UniRef50_Q9HIR8 Cluster: 30S ribosomal protein S17P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S17P -
Thermoplasma acidophilum
Length = 109
Score = 63.3 bits (147), Expect = 2e-09
Identities = 29/79 (36%), Positives = 44/79 (55%)
Frame = -1
Query: 311 KNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLP 132
+N+GL K P E D CP+ G +S+RG++LTG V M ++ V+ R+Y Y+P
Sbjct: 4 RNIGLDVKLP----ESECNDPHCPYHGKLSVRGQVLTGKVVSANMTKSAVVAREYQQYIP 59
Query: 131 KYNRFEKRHRNMSVHLSPC 75
KY R + + VH+ C
Sbjct: 60 KYERKATKIKKYHVHVPDC 78
>UniRef50_Q9YF81 Cluster: 30S ribosomal protein S17P; n=4;
Thermoprotei|Rep: 30S ribosomal protein S17P - Aeropyrum
pernix
Length = 114
Score = 62.9 bits (146), Expect = 3e-09
Identities = 25/60 (41%), Positives = 39/60 (65%)
Frame = -1
Query: 254 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 75
D CP+ G + +RG +L GVV K + +R +V++ YL+Y KYNR+E+R + + HL C
Sbjct: 24 DPNCPWHGTLRVRGVLLEGVVAKARARRMVVVQHVYLYYDKKYNRYERRSKKIHAHLPDC 83
>UniRef50_Q8ZWL3 Cluster: 30S ribosomal protein S17P; n=3;
Pyrobaculum|Rep: 30S ribosomal protein S17P -
Pyrobaculum aerophilum
Length = 123
Score = 61.3 bits (142), Expect = 9e-09
Identities = 26/81 (32%), Positives = 49/81 (60%)
Frame = -1
Query: 311 KNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLP 132
KN+G+ P ++ D CP+ G++ +R ++L V+K++M + V+ ++LHY+
Sbjct: 4 KNIGIPHVLPPASVCD---DPLCPWHGHLKVRLKLLEVTVEKVRMHKAAVVIHEWLHYIR 60
Query: 131 KYNRFEKRHRNMSVHLSPCXQ 69
KYNR+E+R + M V + C +
Sbjct: 61 KYNRYERRRKRMRVRVPECIE 81
>UniRef50_A1RXG3 Cluster: Ribosomal protein S17; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S17 - Thermofilum
pendens (strain Hrk 5)
Length = 111
Score = 54.4 bits (125), Expect = 1e-06
Identities = 23/60 (38%), Positives = 35/60 (58%)
Frame = -1
Query: 254 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 75
D CP+ G + +RG++L V+K+KM V +YL+Y KY R+E R + V + PC
Sbjct: 21 DPLCPWHGELPVRGQVLRLRVEKVKMHNVAVAVHEYLYYNEKYKRYEVRRKKKHVRVPPC 80
>UniRef50_Q59NQ3 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 162
Score = 52.0 bits (119), Expect = 5e-06
Identities = 27/71 (38%), Positives = 40/71 (56%)
Frame = +3
Query: 81 RQMHGHIPVPFLEPIVFG*VVKVIAADHDSSLHLHFLNDAGEDAAADRNVTSEGTLLVNV 260
R + +I V F ++F V++VI++D+D ++H N G+D +D N TSE T VNV
Sbjct: 91 RDVGSNILVSFFVSVIFWNVMQVISSDNDGTVHFGGNNSTGQDFTSDGNSTSEWTFFVNV 150
Query: 261 GTLNRLSGSFE 293
T N FE
Sbjct: 151 RTFNGSFWGFE 161
>UniRef50_Q8TP90 Cluster: Putative 30S ribosomal protein S17P-like;
n=1; Methanosarcina acetivorans|Rep: Putative 30S
ribosomal protein S17P-like - Methanosarcina acetivorans
Length = 486
Score = 51.2 bits (117), Expect = 9e-06
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Frame = -1
Query: 311 KNVGL-GFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYL 135
+++G+ G K P E D +CPF G +S+RG+IL G+V KM + IV++R +
Sbjct: 2 RDIGINGIKLPTEDCN----DPECPFHGKLSVRGQILKGIVISDKMTKNIVMKRYREKWS 57
Query: 134 PKYNRFEKRHRNMSVHLSPCXQGR-GD 57
KY R ++ + + PC + + GD
Sbjct: 58 YKYQRKQRVSSKIHAYSPPCMEAKIGD 84
Score = 32.3 bits (70), Expect = 4.7
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -2
Query: 67 DVEIGDIVTIGECRPLAKTS 8
+ +IGDI+TI ECRPL K S
Sbjct: 79 EAKIGDIITIAECRPLNKGS 98
>UniRef50_Q74NJ4 Cluster: 30S ribosomal protein S17P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S17P -
Nanoarchaeum equitans
Length = 113
Score = 49.6 bits (113), Expect = 3e-05
Identities = 22/60 (36%), Positives = 33/60 (55%)
Frame = -1
Query: 254 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 75
DKKCP G++ +RG G V K +T+ I ++LPKY R+E R ++ +L C
Sbjct: 16 DKKCPHHGHLKVRGFFFKGKVIKKSDNKTVKIEIIRYYWLPKYERYELRRTRITAYLPEC 75
>UniRef50_A0RVY2 Cluster: Ribosomal protein S17; n=2;
Thermoprotei|Rep: Ribosomal protein S17 - Cenarchaeum
symbiosum
Length = 109
Score = 48.0 bits (109), Expect = 9e-05
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = -1
Query: 311 KNVGLGFKTP-REAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYL 135
+ +GL P REA +G DK PF G + IRG++ G + K + T+VI ++ Y
Sbjct: 3 REIGLPVPAPSREAADG---DKNNPFNGTLPIRGKLFEGTIVSAKARSTVVIEKESPVYF 59
Query: 134 PKYNRFEKRHRNMSVHL 84
K+ R+ + + H+
Sbjct: 60 TKFKRYARGRSRIHAHV 76
>UniRef50_UPI0000D9F1CD Cluster: PREDICTED: similar to ribosomal
protein S11; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S11 - Macaca mulatta
Length = 84
Score = 37.5 bits (83), Expect = 0.12
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = -2
Query: 70 RDVEIGDIVTIGECRPLAKT 11
RDV IG IVT+GEC+PL+KT
Sbjct: 44 RDVHIGHIVTVGECQPLSKT 63
>UniRef50_Q6C8W4 Cluster: Patatin-like phospholipase
domain-containing protein YALI0D16379g; n=1; Yarrowia
lipolytica|Rep: Patatin-like phospholipase
domain-containing protein YALI0D16379g - Yarrowia
lipolytica (Candida lipolytica)
Length = 818
Score = 35.9 bits (79), Expect = 0.38
Identities = 22/64 (34%), Positives = 31/64 (48%)
Frame = -1
Query: 284 PREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRH 105
P E ++ YI K +T S+ V K KM T ++ D+ HYL Y++ EKR
Sbjct: 102 PLEPVQKEYITSKHDWTPVFSVLKN--NNSVNKRKMSHT-ALKSDFKHYLDMYDKEEKRR 158
Query: 104 RNMS 93
R S
Sbjct: 159 RGKS 162
>UniRef50_UPI00006CFC97 Cluster: ribosomal protein S17 containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
ribosomal protein S17 containing protein - Tetrahymena
thermophila SB210
Length = 205
Score = 34.7 bits (76), Expect = 0.87
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = -1
Query: 215 GRILTG-VVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVH 87
GR L G V+Q KM +T+ ++ DY ++ PK F+ + VH
Sbjct: 24 GRELFGTVIQHGKMDKTVTVKVDYRYWYPKTKEFKSKTSKYQVH 67
>UniRef50_UPI00001F8C9C Cluster: PREDICTED: hypothetical protein;
n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 147
Score = 33.9 bits (74), Expect = 1.5
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = -1
Query: 350 RKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTG 198
R G +R+D + H N G RE + GT+ K TG S G +TG
Sbjct: 39 RHGIARRRDAQQHGNTSHGHTAAREHVTGTHNSKGSHVTGTHSSTGTHVTG 89
>UniRef50_A4M9T1 Cluster: 30S ribosomal protein S17; n=2;
Bacteria|Rep: 30S ribosomal protein S17 - Petrotoga
mobilis SJ95
Length = 110
Score = 33.9 bits (74), Expect = 1.5
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -1
Query: 212 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVH 87
+I+TG V M +TI + D L PKY++F ++ R H
Sbjct: 4 KIITGKVVSNAMDKTITVETDRLTKHPKYHKFVRKTRRYHAH 45
>UniRef50_Q233G5 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 357
Score = 33.1 bits (72), Expect = 2.7
Identities = 24/94 (25%), Positives = 38/94 (40%)
Frame = -1
Query: 389 EKAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGR 210
+K F T F KGG+ K++ L +K E+I G +R
Sbjct: 103 DKLFVSNDTYFKLMKGGLVCGYCHRPKDLNLDYKKGAESIYQKDFKPHACCKGVPRVRSD 162
Query: 209 ILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKR 108
G + M+ T V R DY+ + + N+ EK+
Sbjct: 163 FFGGFYTQQPMELTTVHRTDYIPHPLEKNKSEKK 196
>UniRef50_Q97ZH0 Cluster: N(2),N(2)-dimethylguanosine tRNA
methyltransferase (EC 2.1.1.32)
(tRNA(guanine-26,N(2)-N(2)) methyltransferase) (tRNA
2,2- dimethylguanosine-26 methyltransferase)
(tRNA(m(2,2)G26)dimethyltransferase); n=2;
Sulfolobus|Rep: N(2),N(2)-dimethylguanosine tRNA
methyltransferase (EC 2.1.1.32)
(tRNA(guanine-26,N(2)-N(2)) methyltransferase) (tRNA
2,2- dimethylguanosine-26 methyltransferase)
(tRNA(m(2,2)G26)dimethyltransferase) - Sulfolobus
solfataricus
Length = 378
Score = 33.1 bits (72), Expect = 2.7
Identities = 22/89 (24%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Frame = -1
Query: 362 VFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDK----KCPFTGNV-SIRGRILTG 198
+F+ + G ++ D +K++ + PR + T++++ KCP G + SI G + G
Sbjct: 221 LFVRVENGARKADDNINKHLKYFGECPRCGFQ-TFVEENCKTKCPVCGEIFSIIGPLYIG 279
Query: 197 VVQKMKMQRTIVIRRDYLHYLPKYNRFEK 111
+ M+ + I+ +YL +NR +K
Sbjct: 280 PLYSMEFLKRIMDLYSNFNYLTSFNRIQK 308
>UniRef50_UPI0000F1F889 Cluster: PREDICTED: similar to breast
cancer-associated antigen BRCAA1, partial; n=6; Danio
rerio|Rep: PREDICTED: similar to breast
cancer-associated antigen BRCAA1, partial - Danio rerio
Length = 932
Score = 32.7 bits (71), Expect = 3.5
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = -1
Query: 431 NCFFSLSSKMADQTE---KAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGT 261
NC +LS+ ++E KA Q ++ GG +K R HKN+ L K R+A +
Sbjct: 716 NCSLTLSNSSQQESEQKAKASSSQKRHKESQGGGATKKHKRSHKNLSLQPKKSRKAAHSS 775
Query: 260 YIDKKC 243
+ +C
Sbjct: 776 DSEDQC 781
>UniRef50_Q4HSD8 Cluster: Putative uncharacterized protein; n=1;
Campylobacter upsaliensis RM3195|Rep: Putative
uncharacterized protein - Campylobacter upsaliensis
RM3195
Length = 342
Score = 32.3 bits (70), Expect = 4.7
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = -1
Query: 389 EKAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGR 210
EK Q + +N K+ +H + G+ + +E+I+ + DKK FTG + + G
Sbjct: 9 EKIIFSQLSTLINGLDCSKQSLEQHKEQEGIVYVKDKESIQSSSTDKKISFTGKI-LNGG 67
Query: 209 IL 204
IL
Sbjct: 68 IL 69
>UniRef50_Q7WZS8 Cluster: 30S ribosomal protein S17; n=1; Candidatus
Portiera aleyrodidarum|Rep: 30S ribosomal protein S17 -
Candidatus Portiera aleyrodidarum
Length = 83
Score = 31.9 bits (69), Expect = 6.2
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = -1
Query: 224 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCXQGRGD 57
+I+ R + G V KM +TIV+ + L Y ++ KR + +SVH S GD
Sbjct: 4 NIKVRKIKGKVVSNKMNKTIVVLIERLFKHKTYGKYIKRSKKLSVHDSKNKAEIGD 59
>UniRef50_Q0F227 Cluster: Ion transport protein; n=1; Mariprofundus
ferrooxydans PV-1|Rep: Ion transport protein -
Mariprofundus ferrooxydans PV-1
Length = 256
Score = 31.9 bits (69), Expect = 6.2
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = -2
Query: 352 TGKVA*RGRTCVTIRMLV*ASKLPERRLRVPTLTRSVPSL 233
TG++A R +R+L + +PE RL V TL RS+PS+
Sbjct: 83 TGELAMLARLARLLRVLRLITAIPELRLIVATLMRSIPSM 122
>UniRef50_Q9VHN4 Cluster: CG8043-PA; n=3; Sophophora|Rep: CG8043-PA
- Drosophila melanogaster (Fruit fly)
Length = 348
Score = 31.9 bits (69), Expect = 6.2
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 84 QMHGHIPVPFLEPIVFG*VVKVIAADHDSSLHLHFLNDAG 203
++HG VPFL+ + V ++ + +S++ HFLN AG
Sbjct: 50 RVHGAEVVPFLQGLATNDVARIQSPGGPASMYAHFLNKAG 89
>UniRef50_Q899R5 Cluster: Conserved protein; n=11; Clostridium|Rep:
Conserved protein - Clostridium tetani
Length = 191
Score = 31.5 bits (68), Expect = 8.1
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = -1
Query: 317 HHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRI-LTGVVQKMKMQRT 168
H +N+G F + G+ ++K P GN+SI G + ++G ++ M +Q T
Sbjct: 107 HIQNIGKVFVEDKPLKPGSAVNKDLPPVGNLSITGIVNISGTLEFMVLQNT 157
>UniRef50_Q9VUL6 Cluster: CG12316-PA, isoform A; n=2;
Sophophora|Rep: CG12316-PA, isoform A - Drosophila
melanogaster (Fruit fly)
Length = 1188
Score = 31.5 bits (68), Expect = 8.1
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -1
Query: 224 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHL 84
S++ RI+ + M+ R++ I+ Y HYLPK+ R + HL
Sbjct: 252 SVKERIVQFAEKFMRPSRSLAIKSVYAHYLPKFTDQNAATRTILNHL 298
>UniRef50_P38519 Cluster: 30S ribosomal protein S17; n=7;
Bacteria|Rep: 30S ribosomal protein S17 - Thermotoga
maritima
Length = 107
Score = 31.5 bits (68), Expect = 8.1
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1
Query: 206 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVH 87
LTG+V KM +T+V+ + L P Y ++ KR + H
Sbjct: 6 LTGIVVSDKMDKTVVVAVEKLVQHPLYKKYVKRTKKYHAH 45
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 442,977,891
Number of Sequences: 1657284
Number of extensions: 8605154
Number of successful extensions: 22110
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 21460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22088
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21918499148
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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