Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_O16
(437 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X06617-1|CAA29834.1| 158|Homo sapiens protein ( Human mRNA for ... 186 4e-47
BC100025-1|AAI00026.1| 158|Homo sapiens RPS11 protein protein. 186 4e-47
BC070224-1|AAH70224.1| 158|Homo sapiens ribosomal protein S11 p... 186 4e-47
BC016378-1|AAH16378.1| 158|Homo sapiens ribosomal protein S11 p... 186 4e-47
BC010028-1|AAH10028.1| 158|Homo sapiens ribosomal protein S11 p... 186 4e-47
BC007945-1|AAH07945.1| 158|Homo sapiens RPS11 protein protein. 186 4e-47
BC007603-1|AAH07603.1| 158|Homo sapiens ribosomal protein S11 p... 186 4e-47
BC007283-1|AAH07283.1| 158|Homo sapiens ribosomal protein S11 p... 186 4e-47
AB028893-2|BAA88215.1| 158|Homo sapiens ribosomal protein S11 p... 186 4e-47
AB007152-1|BAA25818.1| 83|Homo sapiens ribosomal protein S11 p... 85 1e-16
BC098386-1|AAH98386.1| 336|Homo sapiens vacuolar protein sortin... 29 5.3
BC014128-1|AAH14128.1| 336|Homo sapiens vacuolar protein sortin... 29 5.3
BC009747-1|AAH09747.1| 336|Homo sapiens vacuolar protein sortin... 29 5.3
>X06617-1|CAA29834.1| 158|Homo sapiens protein ( Human mRNA for
ribosomal protein S11. ).
Length = 158
Score = 186 bits (452), Expect = 4e-47
Identities = 89/116 (76%), Positives = 101/116 (87%), Gaps = 6/116 (5%)
Frame = -1
Query: 404 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 243
MAD QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 242 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 75
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPC
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPC 116
Score = 42.7 bits (96), Expect = 5e-04
Identities = 17/20 (85%), Positives = 20/20 (100%)
Frame = -2
Query: 70 RDVEIGDIVTIGECRPLAKT 11
RDV+IGDIVT+GECRPL+KT
Sbjct: 118 RDVQIGDIVTVGECRPLSKT 137
>BC100025-1|AAI00026.1| 158|Homo sapiens RPS11 protein protein.
Length = 158
Score = 186 bits (452), Expect = 4e-47
Identities = 89/116 (76%), Positives = 101/116 (87%), Gaps = 6/116 (5%)
Frame = -1
Query: 404 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 243
MAD QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 242 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 75
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPC
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPC 116
Score = 42.7 bits (96), Expect = 5e-04
Identities = 17/20 (85%), Positives = 20/20 (100%)
Frame = -2
Query: 70 RDVEIGDIVTIGECRPLAKT 11
RDV+IGDIVT+GECRPL+KT
Sbjct: 118 RDVQIGDIVTVGECRPLSKT 137
>BC070224-1|AAH70224.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 186 bits (452), Expect = 4e-47
Identities = 89/116 (76%), Positives = 101/116 (87%), Gaps = 6/116 (5%)
Frame = -1
Query: 404 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 243
MAD QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 242 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 75
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPC
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPC 116
Score = 42.7 bits (96), Expect = 5e-04
Identities = 17/20 (85%), Positives = 20/20 (100%)
Frame = -2
Query: 70 RDVEIGDIVTIGECRPLAKT 11
RDV+IGDIVT+GECRPL+KT
Sbjct: 118 RDVQIGDIVTVGECRPLSKT 137
>BC016378-1|AAH16378.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 186 bits (452), Expect = 4e-47
Identities = 89/116 (76%), Positives = 101/116 (87%), Gaps = 6/116 (5%)
Frame = -1
Query: 404 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 243
MAD QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 242 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 75
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPC
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPC 116
Score = 42.7 bits (96), Expect = 5e-04
Identities = 17/20 (85%), Positives = 20/20 (100%)
Frame = -2
Query: 70 RDVEIGDIVTIGECRPLAKT 11
RDV+IGDIVT+GECRPL+KT
Sbjct: 118 RDVQIGDIVTVGECRPLSKT 137
>BC010028-1|AAH10028.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 186 bits (452), Expect = 4e-47
Identities = 89/116 (76%), Positives = 101/116 (87%), Gaps = 6/116 (5%)
Frame = -1
Query: 404 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 243
MAD QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 242 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 75
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPC
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPC 116
Score = 42.7 bits (96), Expect = 5e-04
Identities = 17/20 (85%), Positives = 20/20 (100%)
Frame = -2
Query: 70 RDVEIGDIVTIGECRPLAKT 11
RDV+IGDIVT+GECRPL+KT
Sbjct: 118 RDVQIGDIVTVGECRPLSKT 137
>BC007945-1|AAH07945.1| 158|Homo sapiens RPS11 protein protein.
Length = 158
Score = 186 bits (452), Expect = 4e-47
Identities = 89/116 (76%), Positives = 101/116 (87%), Gaps = 6/116 (5%)
Frame = -1
Query: 404 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 243
MAD QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 242 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 75
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPC
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPC 116
Score = 42.7 bits (96), Expect = 5e-04
Identities = 17/20 (85%), Positives = 20/20 (100%)
Frame = -2
Query: 70 RDVEIGDIVTIGECRPLAKT 11
RDV+IGDIVT+GECRPL+KT
Sbjct: 118 RDVQIGDIVTVGECRPLSKT 137
>BC007603-1|AAH07603.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 186 bits (452), Expect = 4e-47
Identities = 89/116 (76%), Positives = 101/116 (87%), Gaps = 6/116 (5%)
Frame = -1
Query: 404 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 243
MAD QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 242 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 75
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPC
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPC 116
Score = 42.7 bits (96), Expect = 5e-04
Identities = 17/20 (85%), Positives = 20/20 (100%)
Frame = -2
Query: 70 RDVEIGDIVTIGECRPLAKT 11
RDV+IGDIVT+GECRPL+KT
Sbjct: 118 RDVQIGDIVTVGECRPLSKT 137
>BC007283-1|AAH07283.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 186 bits (452), Expect = 4e-47
Identities = 89/116 (76%), Positives = 101/116 (87%), Gaps = 6/116 (5%)
Frame = -1
Query: 404 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 243
MAD QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 242 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 75
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPC
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPC 116
Score = 42.7 bits (96), Expect = 5e-04
Identities = 17/20 (85%), Positives = 20/20 (100%)
Frame = -2
Query: 70 RDVEIGDIVTIGECRPLAKT 11
RDV+IGDIVT+GECRPL+KT
Sbjct: 118 RDVQIGDIVTVGECRPLSKT 137
>AB028893-2|BAA88215.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 186 bits (452), Expect = 4e-47
Identities = 89/116 (76%), Positives = 101/116 (87%), Gaps = 6/116 (5%)
Frame = -1
Query: 404 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 243
MAD QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 242 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 75
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPC
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPC 116
Score = 42.7 bits (96), Expect = 5e-04
Identities = 17/20 (85%), Positives = 20/20 (100%)
Frame = -2
Query: 70 RDVEIGDIVTIGECRPLAKT 11
RDV+IGDIVT+GECRPL+KT
Sbjct: 118 RDVQIGDIVTVGECRPLSKT 137
>AB007152-1|BAA25818.1| 83|Homo sapiens ribosomal protein S11
protein.
Length = 83
Score = 85.0 bits (201), Expect = 1e-16
Identities = 37/41 (90%), Positives = 39/41 (95%)
Frame = -1
Query: 197 VVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 75
VV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPC
Sbjct: 1 VVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPC 41
Score = 42.7 bits (96), Expect = 5e-04
Identities = 17/20 (85%), Positives = 20/20 (100%)
Frame = -2
Query: 70 RDVEIGDIVTIGECRPLAKT 11
RDV+IGDIVT+GECRPL+KT
Sbjct: 43 RDVQIGDIVTVGECRPLSKT 62
>BC098386-1|AAH98386.1| 336|Homo sapiens vacuolar protein sorting
26 homolog B (S. pombe) protein.
Length = 336
Score = 29.5 bits (63), Expect = 5.3
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -1
Query: 422 FSLSSKMADQTEKAFQKQATVFLNRKGGMKRKDMRH 315
+ L+ + D+ E+ + KQ V L RKG + RK M H
Sbjct: 270 YYLNLVLIDEEERRYFKQQEVVLWRKGDIVRKSMSH 305
>BC014128-1|AAH14128.1| 336|Homo sapiens vacuolar protein sorting
26 homolog B (S. pombe) protein.
Length = 336
Score = 29.5 bits (63), Expect = 5.3
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -1
Query: 422 FSLSSKMADQTEKAFQKQATVFLNRKGGMKRKDMRH 315
+ L+ + D+ E+ + KQ V L RKG + RK M H
Sbjct: 270 YYLNLVLIDEEERRYFKQQEVVLWRKGDIVRKSMSH 305
>BC009747-1|AAH09747.1| 336|Homo sapiens vacuolar protein sorting
26 homolog B (S. pombe) protein.
Length = 336
Score = 29.5 bits (63), Expect = 5.3
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -1
Query: 422 FSLSSKMADQTEKAFQKQATVFLNRKGGMKRKDMRH 315
+ L+ + D+ E+ + KQ V L RKG + RK M H
Sbjct: 270 YYLNLVLIDEEERRYFKQQEVVLWRKGDIVRKSMSH 305
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,764,200
Number of Sequences: 237096
Number of extensions: 1368799
Number of successful extensions: 3095
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3086
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3545165828
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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