Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_O15
         (585 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    25   0.47 
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   3.3  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   4.4  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   5.8  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   7.7  

>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 25.0 bits (52), Expect = 0.47
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = -2

Query: 233 SGYIGSGPPQGTGIHRYVYILYKQPGKLDFDEKRLTNTSID 111
           +G  G  P Q   IHR VY   +     + D KR+ N  +D
Sbjct: 306 NGSKGISPEQEELIHRLVYFQNEYEHPSEEDVKRIINQPMD 346


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 10/43 (23%), Positives = 20/43 (46%)
 Frame = -2

Query: 416 LTPTQVKDQPSVTFEAEADAFYTLVFTDPDNYDGPELVYREWH 288
           +TP+ + D+P+  ++        L++T  + Y   E  Y   H
Sbjct: 18  ITPSSIYDKPTKLYQKLYPVLMFLIYTITEIYSVYERRYMNAH 60


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 7/29 (24%), Positives = 13/29 (44%)
 Frame = +2

Query: 71  TFQRISSWRTRRDYQ*TYSLAFSRRSPIF 157
           T+  +  W    DY   Y+L + +   I+
Sbjct: 177 TYDAVIKWSPNEDYSCEYNLVWIKEESIY 205


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +2

Query: 290 AIHGRPAQGRRSCQ 331
           +IH R A G+RSCQ
Sbjct: 135 SIHLRGAIGQRSCQ 148


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 178 TSFINNQENWTSTRK 134
           +S I NQE W+S  K
Sbjct: 37  SSLIFNQEQWSSLNK 51


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,496
Number of Sequences: 336
Number of extensions: 2833
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14621740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)