Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_O15
         (585 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    25   0.55 
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    24   1.3  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    23   2.2  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           23   2.2  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   3.9  
AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    22   5.1  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   8.9  

>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 25.0 bits (52), Expect = 0.55
 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
 Frame = -2

Query: 230 GYIGS-GPPQGTGIHRYVYIL--YKQPGKLDFDEKRLTN 123
           GY+    P Q   IHR VY    Y+QP + D   KR+TN
Sbjct: 326 GYVKPISPEQEELIHRLVYFQNEYEQPSEEDL--KRITN 362


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 13/49 (26%), Positives = 21/49 (42%)
 Frame = -2

Query: 413 TPTQVKDQPSVTFEAEADAFYTLVFTDPDNYDGPELVYREWHHWLVGNI 267
           TP  ++   S+    +  A   L+ +DP        VY +W HW   N+
Sbjct: 829 TPNLLRYFASIATNPKEQAQLNLLASDP-------AVYEDWRHWKFPNL 870


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +1

Query: 208 GGPEPMYPDRVSPAERSPPGMFPTSQWCH 294
           G  + +Y +   PA+R+P    P   W H
Sbjct: 101 GAEDCLYLNVYVPADRTPSQSLPVIFWIH 129


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +1

Query: 208 GGPEPMYPDRVSPAERSPPGMFPTSQWCH 294
           G  + +Y +   PA+R+P    P   W H
Sbjct: 101 GAEDCLYLNVYVPADRTPSQSLPVIFWIH 129


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 513 FECLCYQRHDYSANLTTI 566
           +E  CY R+D + N T I
Sbjct: 456 YEVRCYPRYDDATNATVI 473


>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +2

Query: 125 SLAFSRRSPIFLVVYKGCRRNDGSQYPGVVRSRC 226
           S  F RRS    + Y+ C +N       + R+RC
Sbjct: 38  SQGFFRRSIQQKIQYRPCTKNQQCSILRINRNRC 71


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +2

Query: 134 FSRRSPIFLVVYKGCRRNDGSQYPGVVRSRC 226
           F RRS    + Y+ C +N       + R+RC
Sbjct: 90  FFRRSIQQKIQYRPCTKNQQCSILRINRNRC 120


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,183
Number of Sequences: 438
Number of extensions: 3597
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16993167
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)