Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_O15
(585 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g18100.1 68414.m02244 mother of FT and TF1 protein (MFT) iden... 100 1e-21
At5g03840.1 68418.m00354 terminal flower 1 protein (TFL1) identi... 95 4e-20
At5g62040.1 68418.m07787 brother of FT and TFL1 protein (BFT) id... 86 2e-17
At2g27550.1 68415.m03338 centroradialis protein, putative (CEN) ... 85 2e-17
At1g65480.1 68414.m07429 flowering locus T protein (FT) identica... 85 2e-17
At4g20370.1 68417.m02973 twin sister of FT protein (TSF) / TFL1 ... 79 2e-15
At1g77300.1 68414.m09002 SET domain-containing protein similar t... 29 1.7
At5g51300.2 68418.m06360 splicing factor-related contains simila... 29 2.3
At5g51300.1 68418.m06359 splicing factor-related contains simila... 29 2.3
At4g13190.1 68417.m02051 protein kinase family protein similar t... 28 4.0
At3g63070.1 68416.m07084 PWWP domain-containing protein putative... 28 5.3
At5g59170.1 68418.m07416 proline-rich family protein contains pr... 27 7.0
At1g02080.1 68414.m00130 transcriptional regulator-related conta... 27 9.2
>At1g18100.1 68414.m02244 mother of FT and TF1 protein (MFT)
identical to SP|Q9XFK7 MOTHER of FT and TF1 protein
{Arabidopsis thaliana}; contains Pfam profile PF01161:
Phosphatidylethanolamine-binding protein
Length = 173
Score = 99.5 bits (237), Expect = 1e-21
Identities = 59/162 (36%), Positives = 89/162 (54%), Gaps = 2/162 (1%)
Frame = -2
Query: 506 KIVPDVIPV-APTKNIELKYPSGAIASQGNELTPTQVKDQPSVTFEAEADAFYTLVFTDP 330
+++ DV+ + PT N+ + + I + G E+ P+ + P V +D YTLV TDP
Sbjct: 12 RVIGDVLDMFIPTANMSVYFGPKHITN-GCEIKPSTAVNPPKVNISGHSDELYTLVMTDP 70
Query: 329 DNYDGPELVYREWHHWLVGNIPGG-DLSAGETLSGYIGSGPPQGTGIHRYVYILYKQPGK 153
D E REW HW+V +IPGG + S G+ + Y+ PP GIHRY+ +L++Q
Sbjct: 71 DAPSPSEPNMREWVHWIVVDIPGGTNPSRGKEILPYMEPRPP--VGIHRYILVLFRQNSP 128
Query: 152 LDFDEKRLTNTSIDSRASFSTKKFAEKYNLGAPVAGNFYRAQ 27
+ L SRA+FST+ FA ++LG PVA ++ AQ
Sbjct: 129 VG-----LMVQQPPSRANFSTRMFAGHFDLGLPVATVYFNAQ 165
>At5g03840.1 68418.m00354 terminal flower 1 protein (TFL1) identical
go SP|P93003 TERMINAL FLOWER 1 protein {Arabidopsis
thaliana}; contains Pfam profile PF01161:
Phosphatidylethanolamine-binding protein
Length = 177
Score = 94.7 bits (225), Expect = 4e-20
Identities = 60/164 (36%), Positives = 92/164 (56%), Gaps = 4/164 (2%)
Frame = -2
Query: 506 KIVPDVIPV-APTKNIELKYPSGAIASQGNELTPTQVKDQPSVTFEA-EADAFYTLVFTD 333
++V DV+ PT + + Y + S G+EL P+ V +P V + +F+TLV D
Sbjct: 16 RVVGDVLDFFTPTTKMNVSYNKKQV-SNGHELFPSSVSSKPRVEIHGGDLRSFFTLVMID 74
Query: 332 PDNYDGPELVYREWH-HWLVGNIPGG-DLSAGETLSGYIGSGPPQGTGIHRYVYILYKQP 159
PD GP + + H HW+V NIPG D + G+ + Y P GIHR+V++L++Q
Sbjct: 75 PD-VPGPSDPFLKEHLHWIVTNIPGTTDATFGKEVVSY--ELPRPSIGIHRFVFVLFRQK 131
Query: 158 GKLDFDEKRLTNTSIDSRASFSTKKFAEKYNLGAPVAGNFYRAQ 27
++R+ +I SR F+T+KFA +Y+LG PVA F+ AQ
Sbjct: 132 ------QRRVIFPNIPSRDHFNTRKFAVEYDLGLPVAAVFFNAQ 169
>At5g62040.1 68418.m07787 brother of FT and TFL1 protein (BFT)
identical to SP|Q9FIT4 BROTHER of FT and TFL1 protein
{Arabidopsis thaliana}; contains Pfam profile PF01161:
Phosphatidylethanolamine-binding protein
Length = 177
Score = 85.8 bits (203), Expect = 2e-17
Identities = 53/174 (30%), Positives = 87/174 (50%), Gaps = 3/174 (1%)
Frame = -2
Query: 539 MSLVAQAFEASKIVPDVIPVA-PTKNIELKYPSGAIASQGNELTPTQVKDQPSVTFEAE- 366
MS + +++ DV+ + P+ + + + S I S G+EL P+ + +P V +
Sbjct: 1 MSREIEPLIVGRVIGDVLEMFNPSVTMRVTFNSNTIVSNGHELAPSLLLSKPRVEIGGQD 60
Query: 365 ADAFYTLVFTDPDNYDGPELVYREWHHWLVGNIPG-GDLSAGETLSGYIGSGPPQGTGIH 189
+F+TL+ DPD RE+ HW+V +IPG D S G + Y P GIH
Sbjct: 61 LRSFFTLIMMDPDAPSPSNPYMREYLHWMVTDIPGTTDASFGREIVRY--ETPKPVAGIH 118
Query: 188 RYVYILYKQPGKLDFDEKRLTNTSIDSRASFSTKKFAEKYNLGAPVAGNFYRAQ 27
RYV+ L+KQ G ++ + ++R F+T F+ + L PVA ++ AQ
Sbjct: 119 RYVFALFKQRG------RQAVKAAPETRECFNTNAFSSYFGLSQPVAAVYFNAQ 166
>At2g27550.1 68415.m03338 centroradialis protein, putative (CEN)
strong similarity to SP|Q41261 CENTRORADIALIS protein
{Antirrhinum majus}; contains Pfam profile PF01161:
Phosphatidylethanolamine-binding protein
Length = 175
Score = 85.4 bits (202), Expect = 2e-17
Identities = 60/165 (36%), Positives = 89/165 (53%), Gaps = 5/165 (3%)
Frame = -2
Query: 506 KIVPDVIP-VAPTKNIELKYPSGAIASQGNELTPTQVKDQPSVTFEA-EADAFYTLVFTD 333
+++ DV+ + + Y S G+EL P+ V +P V + +F+TLV TD
Sbjct: 13 RVIGDVVDNCLQAVKMTVTYNSDKQVYNGHELFPSVVTYKPKVEVHGGDMRSFFTLVMTD 72
Query: 332 PDNYDGPELVY-REWHHWLVGNIPG-GDLSAGETLSGYIGSGPPQGTGIHRYVYILYKQP 159
PD GP Y RE HW+V +IPG D+S G+ + GY P GIHR+VY+L+KQ
Sbjct: 73 PD-VPGPSDPYLREHLHWIVTDIPGTTDVSFGKEIIGY--EMPRPNIGIHRFVYLLFKQ- 128
Query: 158 GKLDFDEKRLTNTSIDS-RASFSTKKFAEKYNLGAPVAGNFYRAQ 27
+R + S+ S R F+T++FA + +LG PVA F+ Q
Sbjct: 129 ------TRRGSVVSVPSYRDQFNTREFAHENDLGLPVAAVFFNCQ 167
>At1g65480.1 68414.m07429 flowering locus T protein (FT) identical
to SP|Q9SXZ2 FLOWERING LOCUS T protein {Arabidopsis
thaliana}; contains Pfam profile PF01161:
Phosphatidylethanolamine-binding protein
Length = 175
Score = 85.4 bits (202), Expect = 2e-17
Identities = 63/165 (38%), Positives = 85/165 (51%), Gaps = 4/165 (2%)
Frame = -2
Query: 509 SKIVPDVIPVAPTKNIELKYPSGAI-ASQGNELTPTQVKDQPSVTFEAE-ADAFYTLVFT 336
S++V DV+ ++I LK G + G +L P+QV+++P V E FYTLV
Sbjct: 12 SRVVGDVLDPF-NRSITLKVTYGQREVTNGLDLRPSQVQNKPRVEIGGEDLRNFYTLVMV 70
Query: 335 DPDNYDGPELVYREWHHWLVGNIPGGDLSAGETLSGYIG--SGPPQGTGIHRYVYILYKQ 162
DPD RE+ HWLV +IP + G T I P GIHR V+IL++Q
Sbjct: 71 DPDVPSPSNPHLREYLHWLVTDIPA---TTGTTFGNEIVCYENPSPTAGIHRVVFILFRQ 127
Query: 161 PGKLDFDEKRLTNTSIDSRASFSTKKFAEKYNLGAPVAGNFYRAQ 27
G R T + R +F+T++FAE YNLG PVA FY Q
Sbjct: 128 LG-------RQTVYAPGWRQNFNTREFAEIYNLGLPVAAVFYNCQ 165
>At4g20370.1 68417.m02973 twin sister of FT protein (TSF) / TFL1
like protein identical to SP|Q9S7R5 TWIN SISTER of FT
protein (TFL1 like protein) {Arabidopsis thaliana};
contains Pfam profile PF01161:
Phosphatidylethanolamine-binding protein
Length = 175
Score = 79.0 bits (186), Expect = 2e-15
Identities = 59/162 (36%), Positives = 84/162 (51%), Gaps = 3/162 (1%)
Frame = -2
Query: 503 IVPDVIPVAPTKNIELKYPSG-AIASQGNELTPTQVKDQPSVTFEAEADA-FYTLVFTDP 330
+V DV+ T+ + LK G + G +L P+QV ++P V + FYTLV DP
Sbjct: 14 VVGDVLDPF-TRLVSLKVTYGHREVTNGLDLRPSQVLNKPIVEIGGDDFRNFYTLVMVDP 72
Query: 329 DNYDGPELVYREWHHWLVGNIPGGDLSA-GETLSGYIGSGPPQGTGIHRYVYILYKQPGK 153
D RE+ HWLV +IP +A G + Y PP +GIHR V +L++Q G
Sbjct: 73 DVPSPSNPHQREYLHWLVTDIPATTGNAFGNEVVCYESPRPP--SGIHRIVLVLFRQLG- 129
Query: 152 LDFDEKRLTNTSIDSRASFSTKKFAEKYNLGAPVAGNFYRAQ 27
R T + R F+T++FAE YNLG PVA +++ Q
Sbjct: 130 ------RQTVYAPGWRQQFNTREFAEIYNLGLPVAASYFNCQ 165
>At1g77300.1 68414.m09002 SET domain-containing protein similar to
huntingtin interacting protein 1 [Homo sapiens]
GI:12697196; contains Pfam profile PF00856: SET domain
Length = 1759
Score = 29.5 bits (63), Expect = 1.7
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 179 RRNDGSQYPGVVRSRCIPIESLQQK 253
+R+ G YPGV +++ IP+ LQQ+
Sbjct: 1334 KRDKGGIYPGVNKAQVIPVNKLQQQ 1358
>At5g51300.2 68418.m06360 splicing factor-related contains
similarity to SF1 protein [Drosophila melanogaster]
GI:6687400
Length = 804
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +1
Query: 202 PWGGPEPMYPDRVSPAERSPPGMFPTSQW 288
P G P P P + P PPG +P+ Q+
Sbjct: 565 PPGPPAPQPPTQGYPPSNQPPGAYPSQQY 593
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +1
Query: 196 PVPWGGPEPMYPDRVSPAERSPPGMF 273
PVPWG P P Y P PPG +
Sbjct: 602 PVPWGPPVPSYSPYALPP--PPPGSY 625
>At5g51300.1 68418.m06359 splicing factor-related contains
similarity to SF1 protein [Drosophila melanogaster]
GI:6687400
Length = 804
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +1
Query: 202 PWGGPEPMYPDRVSPAERSPPGMFPTSQW 288
P G P P P + P PPG +P+ Q+
Sbjct: 565 PPGPPAPQPPTQGYPPSNQPPGAYPSQQY 593
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +1
Query: 196 PVPWGGPEPMYPDRVSPAERSPPGMF 273
PVPWG P P Y P PPG +
Sbjct: 602 PVPWGPPVPSYSPYALPP--PPPGSY 625
>At4g13190.1 68417.m02051 protein kinase family protein similar to
serine/threonine kinase BNK1 [Brassica napus]
gi|10445209|gb|AAG16628; contains protein kinase domain,
Pfam:PF00069
Length = 405
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = -2
Query: 503 IVPDVIPVAPTKNIELKYPSGAIASQGNELTPTQVKDQPSVTFEAEADAFYTL 345
++ DV+ + E PSG + N L+P V+DQ + E+ D + L
Sbjct: 353 LISDVVTALSFMSTETGSPSGLTGTALNPLSPKTVEDQGWLQCESPRDVYSLL 405
>At3g63070.1 68416.m07084 PWWP domain-containing protein putative
transcription factor HUA2, Arabidopsis thaliana,
EMBL:AF116556
Length = 1347
Score = 27.9 bits (59), Expect = 5.3
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 196 PVPWGGPEPMYPDRVSPAERSPPG 267
P+ +G PEP Y RVS ++ P G
Sbjct: 1173 PMHYGSPEPSYSSRVSLSKSMPRG 1196
>At5g59170.1 68418.m07416 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 288
Score = 27.5 bits (58), Expect = 7.0
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +1
Query: 190 WIPVPWGGPEPMYPDRVSPAERSPP 264
W P WG P P + P E+ PP
Sbjct: 40 WPPFKWGPKFPYSPPKPPPIEKYPP 64
>At1g02080.1 68414.m00130 transcriptional regulator-related contains
Pfam PF04054: CCR4-Not complex component, Not1; contains
TIGRFAM TIGR01612: reticulocyte binding protein; similar
to General negative regulator of transcription subunit 1
(SP:P25655) {Saccharomyces cerevisiae}; Location of ESTs
gb|T44328 and gb|AA395265
Length = 2378
Score = 27.1 bits (57), Expect = 9.2
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -3
Query: 217 PDHPRVLGSIVTSTSFINNQENWTSTRKG*RIRL-LIVAPRSPRRNSLKS 71
P +P + S TST F+ TSTR G + + +VA R N++++
Sbjct: 895 PKNPGIPTSSSTSTGFVRPARATTSTRFGSALNIETLVAAAERRENAIEA 944
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,284,563
Number of Sequences: 28952
Number of extensions: 254645
Number of successful extensions: 785
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 773
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1151426952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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