Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_O12
         (496 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78412-7|CAB01652.1|  495|Caenorhabditis elegans Hypothetical pr...    31   0.35 
L03524-1|AAA28152.1|  495|Caenorhabditis elegans protein-tyrosin...    31   0.35 
AF036704-5|AAB88558.2|  360|Caenorhabditis elegans Hypothetical ...    28   3.2  
U61947-7|AAB03137.1|  735|Caenorhabditis elegans Hypothetical pr...    28   4.3  
AC006693-7|AAF60385.1|  201|Caenorhabditis elegans Hypothetical ...    28   4.3  
Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical pr...    27   7.5  
AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical ...    27   7.5  

>Z78412-7|CAB01652.1|  495|Caenorhabditis elegans Hypothetical
           protein M176.7 protein.
          Length = 495

 Score = 31.5 bits (68), Expect = 0.35
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = -1

Query: 127 IPYIVNLANRSSYHEEAKKAALLNFYSNRRDRMNSAPEK 11
           I ++V    RS   E+ K  AL+N YS+ RD  ++ PE+
Sbjct: 76  IAFLVWRLRRSKTQEKRKNMALMNIYSDLRDTGDAMPEE 114


>L03524-1|AAA28152.1|  495|Caenorhabditis elegans protein-tyrosine
           kinase protein.
          Length = 495

 Score = 31.5 bits (68), Expect = 0.35
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = -1

Query: 127 IPYIVNLANRSSYHEEAKKAALLNFYSNRRDRMNSAPEK 11
           I ++V    RS   E+ K  AL+N YS+ RD  ++ PE+
Sbjct: 76  IAFLVWRLRRSKTQEKRKNMALMNIYSDLRDTGDAMPEE 114


>AF036704-5|AAB88558.2|  360|Caenorhabditis elegans Hypothetical
           protein ZK185.1 protein.
          Length = 360

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 22/78 (28%), Positives = 35/78 (44%)
 Frame = -1

Query: 475 KEINRSKNRKQFMLSLSFYVNYMSLFWDPDTCCLHPNDLVNEHNLALEQALKLFHPELPD 296
           + I R   RK     L       +  W PD   +      +E N AL QALKL      D
Sbjct: 208 RRIKREMARKSLERRLRVLELRCARTWVPDDDVVFKKKRTSEENKALIQALKLPATSSHD 267

Query: 295 DMEREILKQFIKSKYDDL 242
           D+  +I +  +K+++D++
Sbjct: 268 DIVLKINE--MKTQHDEM 283


>U61947-7|AAB03137.1|  735|Caenorhabditis elegans Hypothetical
           protein C06G3.9 protein.
          Length = 735

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
 Frame = -1

Query: 355 NEHNLALEQALKLFH--PELPDDMEREILKQFIKSKYDDLRELNDAANETAIASAVNVYI 182
           N H L  +Q  +     PE+  D  R +      +  D L + +DA    +  SA ++ +
Sbjct: 566 NAHQLKEKQREETIENLPEMLRDPIRSVFASLKSTDDDALDKFHDAVYNCSAPSATSLAL 625

Query: 181 KKMDK 167
           KK+DK
Sbjct: 626 KKVDK 630


>AC006693-7|AAF60385.1|  201|Caenorhabditis elegans Hypothetical
           protein W02H5.2 protein.
          Length = 201

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 16/59 (27%), Positives = 29/59 (49%)
 Frame = -1

Query: 391 PDTCCLHPNDLVNEHNLALEQALKLFHPELPDDMEREILKQFIKSKYDDLRELNDAANE 215
           P TC ++ N+L +     L Q L  F+ +L + +E        +  ++ L+EL +  NE
Sbjct: 124 PHTCAINKNELAHIVKFDLAQKLHEFYGQLDESLEDR------EESHEILQELQELGNE 176


>Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical
           protein F40E10.4 protein.
          Length = 1410

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = -2

Query: 321 NYFTPNCQMTWREKYLNSSSSRSMTICA 238
           N +  +C++ W  K+L  +  ++ T+CA
Sbjct: 195 NPWNCDCRLRWMRKWLEKAEGQNKTVCA 222


>AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical
           protein F40E10.4 protein.
          Length = 1410

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = -2

Query: 321 NYFTPNCQMTWREKYLNSSSSRSMTICA 238
           N +  +C++ W  K+L  +  ++ T+CA
Sbjct: 195 NPWNCDCRLRWMRKWLEKAEGQNKTVCA 222


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,147,570
Number of Sequences: 27780
Number of extensions: 189985
Number of successful extensions: 561
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 561
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 935344784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)