Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_O12
         (496 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    24   1.0  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   4.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   5.4  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   7.2  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              21   7.2  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    21   9.5  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   9.5  

>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 10/18 (55%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
 Frame = +2

Query: 347 MFVY-QVVWM*AACIGIP 397
           M VY  +VW+ AACI +P
Sbjct: 158 MIVYVSLVWLGAACISLP 175


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -2

Query: 321 NYFTPNCQMTWREKYLNSSSSR 256
           N F  NC M W     N +S+R
Sbjct: 680 NPFNCNCSMDWLPGINNQTSTR 701


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -1

Query: 130 GIPYIVNLANRSSYHEEAKKAALLNFYSNR 41
           G+P +     R +Y EE  +AAL +  S +
Sbjct: 578 GVPVVGAGGGRRAYTEEELQAALRDIQSGK 607


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 5/13 (38%), Positives = 10/13 (76%)
 Frame = +2

Query: 362 VVWM*AACIGIPE 400
           V+W+ A C+ +P+
Sbjct: 177 VIWLLALCLAVPQ 189


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 15/55 (27%), Positives = 25/55 (45%)
 Frame = -1

Query: 343 LALEQALKLFHPELPDDMEREILKQFIKSKYDDLRELNDAANETAIASAVNVYIK 179
           L +E A+K F     D    E + + I   + +  E+N    E +  S  NV++K
Sbjct: 61  LYIECAMKKFSFVDKDGNFNEHVSREIAKIFLNENEINQLITECSAISDTNVHLK 115


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = +3

Query: 153 LNSVALSIFFIYTLTAEAIAV 215
           +NSVAL +F++ + + E + +
Sbjct: 227 INSVALLVFYVPSESGEKVTL 247


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 9/44 (20%), Positives = 18/44 (40%)
 Frame = -1

Query: 283 EILKQFIKSKYDDLRELNDAANETAIASAVNVYIKKMDKATEFK 152
           E+   FIK    ++    D  N+TA+   ++  +      T  +
Sbjct: 183 EMSVDFIKGSISNIDGAEDHCNKTAVRKVISGVVGAASSVTSIQ 226


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,196
Number of Sequences: 438
Number of extensions: 2529
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13667319
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)