Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_O08
(706 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5UAT5 Cluster: 60S ribosomal protein L6; n=15; Bilater... 388 e-107
UniRef50_Q9V9W3 Cluster: 60S ribosomal protein L6; n=6; Metazoa|... 223 3e-57
UniRef50_Q02878 Cluster: 60S ribosomal protein L6; n=71; Euteleo... 183 3e-45
UniRef50_A7L698 Cluster: 60S ribosomal protein L6; n=1; Artemia ... 180 3e-44
UniRef50_Q6B8B0 Cluster: 60S ribosomal protein L6; n=1; Ixodes p... 165 9e-40
UniRef50_A7S4S4 Cluster: Predicted protein; n=5; Eukaryota|Rep: ... 154 2e-36
UniRef50_Q5DE99 Cluster: 60S ribosomal protein L6; n=1; Schistos... 153 4e-36
UniRef50_P47991 Cluster: 60S ribosomal protein L6; n=2; Caenorha... 137 3e-31
UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11; Eukar... 126 4e-28
UniRef50_A3F4R4 Cluster: 60S ribosomal protein L6; n=1; Taenia a... 124 3e-27
UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17; Eukaryo... 119 6e-26
UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffith... 118 1e-25
UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2; Eukaryot... 117 3e-25
UniRef50_Q5CM54 Cluster: 60S ribosomal protein L6; n=2; Cryptosp... 109 5e-23
UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15; Pezizom... 106 5e-22
UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16; Dikar... 103 4e-21
UniRef50_A0N0S1 Cluster: 60S ribosomal protein L6; n=1; Strongyl... 94 3e-18
UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=... 89 1e-16
UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5; Oligohym... 84 3e-15
UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2; Sordaria... 82 1e-14
UniRef50_Q4X638 Cluster: 60S ribosomal subunit protein L6e, puta... 73 5e-12
UniRef50_UPI0000DA1E66 Cluster: PREDICTED: similar to ribosomal ... 72 2e-11
UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=1... 71 2e-11
UniRef50_UPI0000DC20AA Cluster: UPI0000DC20AA related cluster; n... 68 3e-10
UniRef50_A5C5P0 Cluster: 60S ribosomal protein L6; n=1; Vitis vi... 61 3e-08
UniRef50_A2EBD1 Cluster: 60S ribosomal protein L6, putative; n=7... 55 2e-06
UniRef50_Q8SR91 Cluster: 60S RIBOSOMAL PROTEIN L6; n=1; Encephal... 48 2e-04
UniRef50_A0EZZ8 Cluster: 60S ribosomal protein L6; n=5; Euteleos... 44 0.003
UniRef50_Q98RL7 Cluster: 60S ribosomal protein L6B; n=1; Guillar... 44 0.004
UniRef50_Q8U2L5 Cluster: 50S ribosomal protein L14e; n=5; Archae... 41 0.034
UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia... 40 0.060
UniRef50_P54054 Cluster: 50S ribosomal protein L14e; n=8; Euryar... 40 0.079
UniRef50_A7QIH5 Cluster: Chromosome chr12 scaffold_103, whole ge... 39 0.10
UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14; Archa... 38 0.18
UniRef50_A2RKU3 Cluster: Cation-transporting ATPase; n=2; Lactoc... 36 0.97
UniRef50_Q8BTI8 Cluster: Serine/arginine repetitive matrix prote... 36 0.97
UniRef50_Q91238 Cluster: High molecular weight basic nuclear pro... 34 3.9
UniRef50_Q4ZTN3 Cluster: Sensor protein; n=5; Pseudomonas|Rep: S... 34 3.9
UniRef50_Q2HF67 Cluster: Putative uncharacterized protein; n=2; ... 34 3.9
UniRef50_A7ET80 Cluster: Putative uncharacterized protein; n=1; ... 34 3.9
UniRef50_Q2EG98 Cluster: Polycystic kidney disease 1-like 3 vari... 33 5.2
UniRef50_Q5QLZ3 Cluster: Gastric mucin-like protein; n=4; Oryza ... 33 5.2
UniRef50_A0JCX9 Cluster: Putative uncharacterized protein; n=1; ... 33 5.2
UniRef50_Q5KML3 Cluster: VpsB, putative; n=2; Basidiomycota|Rep:... 33 5.2
UniRef50_A7E738 Cluster: Predicted protein; n=1; Sclerotinia scl... 33 5.2
UniRef50_Q7NID4 Cluster: Gll2249 protein; n=8; Cyanobacteria|Rep... 33 9.0
UniRef50_Q0J1B9 Cluster: Os09g0451700 protein; n=2; Oryza sativa... 33 9.0
UniRef50_A2DQF0 Cluster: Surface protein, putative; n=1; Trichom... 33 9.0
>UniRef50_Q5UAT5 Cluster: 60S ribosomal protein L6; n=15;
Bilateria|Rep: 60S ribosomal protein L6 - Bombyx mori
(Silk moth)
Length = 273
Score = 388 bits (954), Expect = e-107
Identities = 190/205 (92%), Positives = 190/205 (92%)
Frame = -1
Query: 625 LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVC 446
LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVC
Sbjct: 69 LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVC 128
Query: 445 ILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPK 266
ILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPK
Sbjct: 129 ILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPK 188
Query: 265 HFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPD 86
HFNDDYF KEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPD
Sbjct: 189 HFNDDYFKKNKKCVKRTVKRKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPD 248
Query: 85 KKVLRGYLKAAFGLRSSQEPXRLRF 11
KKVLRGYLKAAFGLRSSQ P RLRF
Sbjct: 249 KKVLRGYLKAAFGLRSSQYPHRLRF 273
>UniRef50_Q9V9W3 Cluster: 60S ribosomal protein L6; n=6;
Metazoa|Rep: 60S ribosomal protein L6 - Drosophila
melanogaster (Fruit fly)
Length = 262
Score = 223 bits (545), Expect = 3e-57
Identities = 113/201 (56%), Positives = 136/201 (67%)
Frame = -1
Query: 613 VKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLA 434
VK+IGG KNGG RTV LK+ K+ YPT+ ++ FS+H R R NL GTV ILLA
Sbjct: 65 VKKIGGPKNGGERTVFLKKSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLA 124
Query: 433 GRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFND 254
GRH GKRVVL+ +L SGLLLVTGPFA NSCPLRR+ QRYVIGTS+++ LG FK+P+H ND
Sbjct: 125 GRHQGKRVVLLKVLASGLLLVTGPFALNSCPLRRVSQRYVIGTSSKVDLGAFKVPEHLND 184
Query: 253 DYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVL 74
YF DIFA KKE++VP+EQRK DQK VD A++K I A P+ K
Sbjct: 185 AYFRRLKAKKDKKTGEA---DIFAAKKERFVPNEQRKKDQKEVDAALLKVIKAHPEGKFF 241
Query: 73 RGYLKAAFGLRSSQEPXRLRF 11
YL+ F L SSQ P R+RF
Sbjct: 242 AKYLQNMFALHSSQYPHRMRF 262
>UniRef50_Q02878 Cluster: 60S ribosomal protein L6; n=71;
Euteleostomi|Rep: 60S ribosomal protein L6 - Homo
sapiens (Human)
Length = 288
Score = 183 bits (446), Expect = 3e-45
Identities = 98/207 (47%), Positives = 130/207 (62%), Gaps = 2/207 (0%)
Frame = -1
Query: 625 LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGT 452
L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT
Sbjct: 89 LATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGT 148
Query: 451 VCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKL 272
+ I+L GRH GKRVV + L SGLLLVTGP N PLRR Q++VI TST+I + N K+
Sbjct: 149 ILIILTGRHRGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKI 208
Query: 271 PKHFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGAR 92
PKH D YF +EG +IF T+KEKY +EQRK DQK VD ++ I A
Sbjct: 209 PKHLTDAYF---KKKKLRKPRHQEG-EIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAI 264
Query: 91 PDKKVLRGYLKAAFGLRSSQEPXRLRF 11
P L+GYL++ F L + P +L F
Sbjct: 265 PQ---LQGYLRSVFALTNGIYPHKLVF 288
>UniRef50_A7L698 Cluster: 60S ribosomal protein L6; n=1; Artemia
franciscana|Rep: 60S ribosomal protein L6 - Artemia
sanfranciscana (Brine shrimp) (Artemia franciscana)
Length = 241
Score = 180 bits (438), Expect = 3e-44
Identities = 97/203 (47%), Positives = 130/203 (64%)
Frame = -1
Query: 619 VVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCIL 440
V+ K+IGG+KNGGTR V ++ FYP + + +K+ +IR +L+ GT+ IL
Sbjct: 44 VIEKKIGGDKNGGTRLVSTRKPPQFYPINSRQKRFHRRLVNNKNPPKIRKSLQPGTILIL 103
Query: 439 LAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHF 260
LAG + GKRVVL+ L SGLLLV+GP N PLRR+ Q+ VI TSTRI + N K+P+H
Sbjct: 104 LAGVNRGKRVVLLKALKSGLLLVSGPLKVNRVPLRRVHQKLVIATSTRIDISNVKVPEHI 163
Query: 259 NDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKK 80
ND YF KEG DIFA+K E+Y P+EQRK DQ VD ++KAI A+PD
Sbjct: 164 NDTYF----RRHKVKKEAKEG-DIFASKPERYTPTEQRKKDQAEVDVQLLKAIKAQPDAA 218
Query: 79 VLRGYLKAAFGLRSSQEPXRLRF 11
+L YL+ FGL+++ P RL+F
Sbjct: 219 MLVKYLRTIFGLKNNMIPHRLKF 241
>UniRef50_Q6B8B0 Cluster: 60S ribosomal protein L6; n=1; Ixodes
pacificus|Rep: 60S ribosomal protein L6 - Ixodes
pacificus (western blacklegged tick)
Length = 268
Score = 165 bits (401), Expect = 9e-40
Identities = 90/205 (43%), Positives = 126/205 (61%), Gaps = 2/205 (0%)
Frame = -1
Query: 619 VVVKQIGGEKNGGTRTVPLKRRKSFYPTQE--KIRASSGGRPFSKHVRRIRPNLKIGTVC 446
V VK++ GEKNGG R +PLK+ + YPT++ + + +S +P S+ +R + GTV
Sbjct: 67 VTVKRVKGEKNGGKRVLPLKKERRSYPTEDSPQHKRTSHMKPSSRTRVALRKRITPGTVL 126
Query: 445 ILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPK 266
ILLAG H GKRVV + L +GLL VTGP+ N CPLRRI Q YVI TST++ L KLP+
Sbjct: 127 ILLAGPHRGKRVVFLKQLKTGLLPVTGPYGVNGCPLRRINQIYVIATSTKLDLSKVKLPE 186
Query: 265 HFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPD 86
+D YF EG +IF K +++V SE+ K Q VD+ V++A+ A P+
Sbjct: 187 GLDDRYF--KRNKGPKRGRKDEG-EIFEAKPQEHVVSEEHKKTQAEVDKQVLEAVKAHPE 243
Query: 85 KKVLRGYLKAAFGLRSSQEPXRLRF 11
KK+L YL A F LR+ P +++F
Sbjct: 244 KKMLLHYLAATFSLRNRMYPHKMKF 268
>UniRef50_A7S4S4 Cluster: Predicted protein; n=5; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 244
Score = 154 bits (373), Expect = 2e-36
Identities = 88/200 (44%), Positives = 115/200 (57%)
Frame = -1
Query: 610 KQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAG 431
K IGG+KNGG R VP++R +YPT++ +R R + ++R ++ GTV ILLAG
Sbjct: 54 KDIGGDKNGGKRVVPVQRESRYYPTED-VRRRLANRK-KPGMAKLRSSITPGTVLILLAG 111
Query: 430 RHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDD 251
H GKRVV + L SGLLLVTGPF N PLRRIPQ YVI TST I + + KLP+H
Sbjct: 112 AHRGKRVVFLKQLNSGLLLVTGPFKINGVPLRRIPQSYVIATSTHIDVSDVKLPEH---- 167
Query: 250 YFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLR 71
F K +D+F E+ PSEQR DQK VD+ ++ I A P+ ++
Sbjct: 168 AFADESYFKGEPKKKKRSEDMFEEAAEEKKPSEQRIADQKAVDDQILPKISAVPN---MK 224
Query: 70 GYLKAAFGLRSSQEPXRLRF 11
YL + F LR Q P + F
Sbjct: 225 KYLSSLFSLRKGQFPHDMVF 244
>UniRef50_Q5DE99 Cluster: 60S ribosomal protein L6; n=1; Schistosoma
japonicum|Rep: 60S ribosomal protein L6 - Schistosoma
japonicum (Blood fluke)
Length = 238
Score = 153 bits (371), Expect = 4e-36
Identities = 83/189 (43%), Positives = 111/189 (58%), Gaps = 3/189 (1%)
Frame = -1
Query: 568 PLKRRKSFYPTQE---KIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVG 398
P R Y TQ+ K+R + FS HVR+IR +++ GTV ILLAG H GKRV+ +
Sbjct: 55 PKTRFPRSYVTQQGKRKLRLRRA-KCFSNHVRKIRSSIQPGTVLILLAGPHKGKRVIFLK 113
Query: 397 ILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXX 218
L SGLLLVTGPF +N PLRR+ Q YVI TSTRI + F +PKH +D+YF
Sbjct: 114 ALKSGLLLVTGPFKYNGVPLRRVNQCYVIATSTRIDISKFDVPKHIDDEYF----RRVDL 169
Query: 217 XXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRS 38
+ +F+T+ +KY S+ RK DQK VD + AI + PD K+L YL++ F L
Sbjct: 170 KESKTDAGKLFSTETKKYTVSDIRKEDQKLVDNQIRAAIKSHPDSKILHAYLRSLFSLGK 229
Query: 37 SQEPXRLRF 11
P ++ F
Sbjct: 230 RDYPHKMIF 238
>UniRef50_P47991 Cluster: 60S ribosomal protein L6; n=2;
Caenorhabditis|Rep: 60S ribosomal protein L6 -
Caenorhabditis elegans
Length = 217
Score = 137 bits (331), Expect = 3e-31
Identities = 74/157 (47%), Positives = 95/157 (60%), Gaps = 1/157 (0%)
Frame = -1
Query: 478 IRPNLKIGTVCILLAGRHAGKRVVLVGILP-SGLLLVTGPFAFNSCPLRRIPQRYVIGTS 302
+R L GTV I+LAGRH GKRVV + LP SGLLLVTGP N PLRRI Q +VI TS
Sbjct: 67 LRKTLTPGTVLIVLAGRHKGKRVVFLKQLPQSGLLLVTGPHKINGFPLRRIGQAFVIATS 126
Query: 301 TRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVD 122
++++ K+P+H ND+YF G +IFA+ K +Y SEQRK D KTVD
Sbjct: 127 LKVNVSGVKIPEHINDEYFKRKSTAQKT------GKNIFASGKTEYTVSEQRKKDIKTVD 180
Query: 121 EAVIKAIGARPDKKVLRGYLKAAFGLRSSQEPXRLRF 11
++ AI P+ K L GYL F L +Q P +++F
Sbjct: 181 APILAAIKKHPEHKFLFGYLGTRFSLGKNQYPHKMQF 217
>UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11;
Eukaryota|Rep: 60S ribosomal protein L6-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 233
Score = 126 bits (305), Expect = 4e-28
Identities = 78/186 (41%), Positives = 106/186 (56%)
Frame = -1
Query: 568 PLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILP 389
P+++ FYP ++ ++ R +K + +R ++ GTV I+LAGR GKRVV + L
Sbjct: 57 PVEKPPKFYPAED-VKKPLPNRRTAKPAK-LRASITPGTVLIILAGRFKGKRVVFLKQLA 114
Query: 388 SGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXX 209
SGLLLVTGPF N PLRR+ Q YVIGTST++ + L K F+D YF
Sbjct: 115 SGLLLVTGPFKINGVPLRRVNQAYVIGTSTKVDISGVTLDK-FDDKYF---GKVAEKKKK 170
Query: 208 XKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQE 29
EG+ A K+EK + +K DQK VD A+IKAI A P+ L+ YL A F L+ +
Sbjct: 171 KTEGEFFEAEKEEKKEIPQGKKDDQKAVDAALIKAIEAVPE---LKTYLGARFSLKQGMK 227
Query: 28 PXRLRF 11
P L F
Sbjct: 228 PHELVF 233
>UniRef50_A3F4R4 Cluster: 60S ribosomal protein L6; n=1; Taenia
asiatica|Rep: 60S ribosomal protein L6 - Taenia asiatica
(Asian tapeworm)
Length = 212
Score = 124 bits (298), Expect = 3e-27
Identities = 66/132 (50%), Positives = 81/132 (61%)
Frame = -1
Query: 499 FSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQR 320
F+ H RRIR ++ G V ILLAGRH KRVV + L SGLLLVTGPF +N PLRR+ QR
Sbjct: 86 FADHRRRIRKSITPGKVLILLAGRHRAKRVVFLKSLASGLLLVTGPFKYNGVPLRRVNQR 145
Query: 319 YVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKT 140
YVI T TRI + N K+P ND++F D IFA +++KY S+ RK
Sbjct: 146 YVIATKTRIKIKNIKIPSQLNDEFFRRQDLKTKKSV-----DKIFAEEEKKYTVSDDRKK 200
Query: 139 DQKTVDEAVIKA 104
QK VD A+I A
Sbjct: 201 LQKQVDTALIAA 212
>UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17;
Eukaryota|Rep: 60S ribosomal protein L6 - Oryza sativa
(Rice)
Length = 222
Score = 119 bits (287), Expect = 6e-26
Identities = 80/182 (43%), Positives = 104/182 (57%), Gaps = 3/182 (1%)
Frame = -1
Query: 547 FYPTQE-KIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLV 371
FYP + K R S +P + ++R ++ GTV ILLAGR GKRVV + L SGLLLV
Sbjct: 53 FYPADDVKPRQPSTRKP---NPTKLRSSITPGTVLILLAGRFMGKRVVFLKQLKSGLLLV 109
Query: 370 TGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXKEGDD 191
TGPF N P+RR+ Q YVI TST++ + + K F+D YF EG +
Sbjct: 110 TGPFKINGVPIRRVNQPYVIATSTKVDISGVNVEK-FDDKYF---SRDKKQKAKKTEG-E 164
Query: 190 IFATKKE--KYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQEPXRL 17
+F T+KE K +P E +K DQK VD +IKAI A PD L+ YL A F LR +P +
Sbjct: 165 LFETEKEATKNLP-EFKKEDQKVVDAELIKAIEAVPD---LKTYLGARFSLRDGDKPHEM 220
Query: 16 RF 11
F
Sbjct: 221 VF 222
>UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffithsia
japonica|Rep: 60S ribosomal protein L6 - Griffithsia
japonica (Red alga)
Length = 216
Score = 118 bits (285), Expect = 1e-25
Identities = 74/204 (36%), Positives = 103/204 (50%)
Frame = -1
Query: 625 LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVC 446
+ ++ K IGG KNGG R VP K+ +YP +K + K + +RP++K GT+
Sbjct: 20 IKMIKKPIGGAKNGGYRLVPEKKGPKWYPADDKKTPVPSRKNVHKPTK-LRPSIKSGTIV 78
Query: 445 ILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPK 266
ILLAG G RVV++ L SG LLVTGP+A N PL R+ QRYVI TST I + + K
Sbjct: 79 ILLAGVFRGSRVVVLKQLDSGQLLVTGPYAVNRIPLTRVDQRYVIATSTSIDVSKVDV-K 137
Query: 265 HFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPD 86
++ YF D ++K E R DQK +D ++ I P
Sbjct: 138 KIDNAYFRKPQKKKKTDVMEV---DTAKKDEQKTKAIEARIADQKAIDAVLLPVIEKEP- 193
Query: 85 KKVLRGYLKAAFGLRSSQEPXRLR 14
+L YLK F L+ Q P ++
Sbjct: 194 --LLSSYLKVKFSLKKGQYPHAMK 215
>UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2;
Eukaryota|Rep: 60S ribosomal protein L6 - Dictyostelium
discoideum AX4
Length = 236
Score = 117 bits (281), Expect = 3e-25
Identities = 72/191 (37%), Positives = 101/191 (52%)
Frame = -1
Query: 583 GTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVL 404
G R + K K +IR+++ + K +R ++ GTV I+LAGR AGKRVV
Sbjct: 54 GKRVIAAKASKFAPSIPAEIRSTAAKKVQQKVA--LRKSITPGTVLIILAGRFAGKRVVA 111
Query: 403 VGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXX 224
+ L SGL+L+TGPF N PLRRI QRYVI TST+I + + K+ ND YF
Sbjct: 112 LKQLDSGLILITGPFKVNGVPLRRIDQRYVIATSTKIDVSSVKVAATINDAYFAAEKKST 171
Query: 223 XXXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGL 44
D+ K EK ++ R DQK+VD A++ + +K L YLK F L
Sbjct: 172 TKSEGAFFSDE---KKAEKKKIADSRVADQKSVDSAILAVL---KKEKFLTVYLKTKFYL 225
Query: 43 RSSQEPXRLRF 11
+ + P +L+F
Sbjct: 226 KKGEFPHQLKF 236
>UniRef50_Q5CM54 Cluster: 60S ribosomal protein L6; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L6 -
Cryptosporidium hominis
Length = 184
Score = 109 bits (263), Expect = 5e-23
Identities = 65/171 (38%), Positives = 95/171 (55%)
Frame = -1
Query: 523 RASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSC 344
R S R S ++R +L+ G VCILLAG + GKRVV++ LPSGL++VTGP+A N
Sbjct: 20 RKYSSRRKASVVAPKLRSSLQPGVVCILLAGPYKGKRVVMLKALPSGLVVVTGPYALNGV 79
Query: 343 PLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKY 164
P+RR+ Y+I TST++ + + K F D+YF D TK +
Sbjct: 80 PVRRVNPAYIIATSTKVDVSKADVSK-FTDEYFKVDRSKLKKSKDAFM-DQGEETKVNRV 137
Query: 163 VPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQEPXRLRF 11
V SE+RK Q+ +D ++I +I + P ++ YLK F L S P +L+F
Sbjct: 138 V-SEERKKTQQALDASIIPSIQSNP---LMMSYLKTRFTLTSGMFPHKLKF 184
>UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15;
Pezizomycotina|Rep: 60S ribosomal protein L6 -
Coccidioides immitis
Length = 206
Score = 106 bits (255), Expect = 5e-22
Identities = 73/214 (34%), Positives = 110/214 (51%), Gaps = 10/214 (4%)
Frame = -1
Query: 622 TVVVKQIGGEKN--GGTRTVPLKRRKS--FYPTQEKIRASSGGRPFSKHVRRIRPNLKIG 455
T+ K +G K G R +P +K+ +YP ++ + + + H ++RP+L+ G
Sbjct: 4 TLDSKSVGQTKKFGKGERVIPHPSQKAQKWYPADDEPQPKKARK--TAHPTKLRPSLQPG 61
Query: 454 TVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNF- 278
T+ ILLAGR GKRV+L+ L G+LLVTGPF N PLRR+ RYVI TS+ + L
Sbjct: 62 TILILLAGRFRGKRVILLKHLGQGVLLVTGPFKLNGVPLRRVNARYVIATSSTVDLNGVD 121
Query: 277 --KLPKHFNDDYFXXXXXXXXXXXXXKEGDDIF---ATKKEKYVPSEQRKTDQKTVDEAV 113
L K +YF K+G++ F K EK + R DQK +D+A+
Sbjct: 122 QKTLEKVSQPEYF------TREKAEQKKGEEAFFKQGEKPEKKKVASARAADQKAIDQAL 175
Query: 112 IKAIGARPDKKVLRGYLKAAFGLRSSQEPXRLRF 11
+ I P L YL + F LR+ +P +++
Sbjct: 176 LATIKKEP---FLGSYLASTFSLRTGDKPHEMKW 206
>UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16;
Dikarya|Rep: 60S ribosomal protein L6-A - Saccharomyces
cerevisiae (Baker's yeast)
Length = 176
Score = 103 bits (247), Expect = 4e-21
Identities = 66/184 (35%), Positives = 103/184 (55%)
Frame = -1
Query: 562 KRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSG 383
++ +YP+++ + A R ++ +++R +L GTV ILLAGR GKRVV + L
Sbjct: 4 QKAPKWYPSED-VAALKKTRKAARP-QKLRASLVPGTVLILLAGRFRGKRVVYLKHLEDN 61
Query: 382 LLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXK 203
LL++GPF N PLRR+ RYVI TST++S+ + K FN +YF
Sbjct: 62 TLLISGPFKVNGVPLRRVNARYVIATSTKVSVEGVNVEK-FNVEYFAKEKLTKKEKKEA- 119
Query: 202 EGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQEPX 23
++F ++ K + +E R DQK VD+A+I I P +L+ YL A+F L++ +P
Sbjct: 120 ---NLFPEQQNKEIKAE-RVEDQKVVDKALIAEIKKTP---LLKQYLSASFSLKNGDKPH 172
Query: 22 RLRF 11
L+F
Sbjct: 173 MLKF 176
>UniRef50_A0N0S1 Cluster: 60S ribosomal protein L6; n=1;
Strongyloides papillosus|Rep: 60S ribosomal protein L6 -
Strongyloides papillosus
Length = 127
Score = 93.9 bits (223), Expect = 3e-18
Identities = 49/124 (39%), Positives = 67/124 (54%)
Frame = -1
Query: 382 LLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXK 203
L GPF+ N P+RRI Q++V+ TST+I + K+P DDYF
Sbjct: 10 LFTFLGPFSINGVPVRRIAQKFVLPTSTKIDVSGVKIPATMTDDYFKRTKYFGK------ 63
Query: 202 EGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQEPX 23
E DIF K++Y ++ RK DQKT+D AV+ +I D K+L GYL+ FGL Q P
Sbjct: 64 EKKDIFEQGKQEYTLTDARKADQKTIDTAVLGSIKKHTDGKLLAGYLRTNFGLSKRQYPH 123
Query: 22 RLRF 11
+ F
Sbjct: 124 NMVF 127
>UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L6e, putative -
Theileria parva
Length = 212
Score = 88.6 bits (210), Expect = 1e-16
Identities = 63/173 (36%), Positives = 83/173 (47%), Gaps = 1/173 (0%)
Frame = -1
Query: 571 VPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGIL 392
V L RRK+ K + GR ++ V ++R +LK G V ILL G + GKRVVL+ +L
Sbjct: 12 VKLNRRKTVVTRLGKTKVV--GRKYAS-VPKVRESLKPGAVLILLTGSYKGKRVVLLKVL 68
Query: 391 PSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXX 212
SGLLLVTGPF+FN PLRR+ RYVI TST + ++ P +Y
Sbjct: 69 KSGLLLVTGPFSFNGVPLRRVNSRYVIATSTNV----YEFP-----EYDGSSLKSSVERA 119
Query: 211 XXKEGDDIFA-TKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKA 56
D+ F TK+ K + RK K D + L LKA
Sbjct: 120 VSDLTDESFGKTKETKLAEFKDRKKKNKNKDSMFVDEPSVSEKSPELMAKLKA 172
>UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5;
Oligohymenophorea|Rep: 60S ribosomal protein L6 -
Paramecium tetraurelia
Length = 208
Score = 84.2 bits (199), Expect = 3e-15
Identities = 62/175 (35%), Positives = 86/175 (49%), Gaps = 3/175 (1%)
Frame = -1
Query: 526 IRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNS 347
+R RP + +R+I P G V ILL+GR GKRVV + L SGLLLVTGPF N
Sbjct: 44 VRKRKAPRPAT--LRKIVP----GQVLILLSGRFQGKRVVFLKQLKSGLLLVTGPFKING 97
Query: 346 CPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXX---XKEGDDIFATK 176
PL+R+ YVI TST++ + NDDYF K G+ +
Sbjct: 98 VPLKRVNSAYVIPTSTKVDVTGVN-ANQINDDYFKRTQAQRRKNEQGFWAKRGELTVEQQ 156
Query: 175 KEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQEPXRLRF 11
+ + ++ QK+VD A+I AI ++L+ YL A F + + P L F
Sbjct: 157 TAEKTRLDGKRNTQKSVDAALITAI---KKTQLLKQYLGARFTIGKTTRPHELVF 208
>UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2;
Sordariaceae|Rep: 60S ribosomal protein L6 - Neurospora
crassa
Length = 207
Score = 81.8 bits (193), Expect = 1e-14
Identities = 71/192 (36%), Positives = 91/192 (47%), Gaps = 27/192 (14%)
Frame = -1
Query: 505 RPFSKHVRRIRPNLKI--GTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRR 332
RP K +R P + GTV ILLAGR GKRVVL+ L G+LLVTGPF N PLRR
Sbjct: 24 RPVRKTIRPWSPRSTLVPGTVLILLAGRFRGKRVVLLKALDQGVLLVTGPFKINGVPLRR 83
Query: 331 IPQRYVIGTSTRISLGNF---KL-----PKHF---------NDDYFXXXXXXXXXXXXXK 203
+ RYVI TS ++ L K+ PK+F ++ F
Sbjct: 84 VNARYVIATSQKVDLAGIDEAKINEIAQPKYFTAEKSKEKAGEEAFFKQGEKPQVRLGNS 143
Query: 202 E------GDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKV--LRGYLKAAFG 47
E DI KKE S R DQK +D+A+I I KKV L YL ++F
Sbjct: 144 ELEHGAHNADIVMQKKE---VSSSRVADQKAIDKALIANI-----KKVEFLASYLASSFT 195
Query: 46 LRSSQEPXRLRF 11
LR +P +++
Sbjct: 196 LRKGDKPHEMKW 207
>UniRef50_Q4X638 Cluster: 60S ribosomal subunit protein L6e,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L6e, putative - Plasmodium chabaudi
Length = 241
Score = 73.3 bits (172), Expect = 5e-12
Identities = 44/115 (38%), Positives = 64/115 (55%), Gaps = 7/115 (6%)
Frame = -1
Query: 616 VVKQIGGEKNGGTRTVPLKRRKSFYPTQEK--IRASSGGRPFS---KHV--RRIRPNLKI 458
VV G +KN V ++K P + K I GR + K V R++R ++++
Sbjct: 17 VVPATGDKKNALKHYVIKGQKKILTPVRAKKTISKKHYGRKLASKKKFVVQRKMRSSIQV 76
Query: 457 GTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRI 293
G V I+L G+H GKR ++ +L SGLL V GP+ N PL+R+ RY+I TST I
Sbjct: 77 GKVAIILTGKHMGKRCIIAKVLKSGLLAVVGPYEVNGVPLKRVDPRYLIVTSTNI 131
>UniRef50_UPI0000DA1E66 Cluster: PREDICTED: similar to ribosomal
protein L6; n=5; Eutheria|Rep: PREDICTED: similar to
ribosomal protein L6 - Rattus norvegicus
Length = 112
Score = 71.7 bits (168), Expect = 2e-11
Identities = 37/70 (52%), Positives = 43/70 (61%)
Frame = -1
Query: 454 TVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFK 275
TV I+L GRH GKRVV + L SGLLLVTGP A N PL R+ Q VI T T++ + K
Sbjct: 13 TVLIILTGRHRGKRVVFLKQLGSGLLLVTGPLALNRVPLCRMHQSVVISTFTKVDICKVK 72
Query: 274 LPKHFNDDYF 245
KH D F
Sbjct: 73 TSKHLTDASF 82
>UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=11;
Trypanosomatidae|Rep: 60S ribosomal protein L6, putative
- Leishmania major
Length = 195
Score = 71.3 bits (167), Expect = 2e-11
Identities = 49/164 (29%), Positives = 77/164 (46%), Gaps = 11/164 (6%)
Frame = -1
Query: 478 IRPNLKIGTVCILLAGRHAGKRVVLVGILP-SGLLLVTGPFAFNSCPLRRIPQRYVIGTS 302
+R + G + I+LAGR G+R V++ LP +G L+V+GP +N P+RRI RYVI TS
Sbjct: 29 LRKSCAPGAIAIILAGRFRGRRAVILKQLPHNGPLVVSGPMKYNGVPIRRIDSRYVIATS 88
Query: 301 TRISLGN----------FKLPKHFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSE 152
T + + + F+ PK ++ + +K + S+
Sbjct: 89 TTVDISSVDTAPITAEVFQRPKAEKPTKSEGDFMGDKQKAKAEKAAKKTSKAGKKTLVSD 148
Query: 151 QRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQEPXR 20
R QK +D A+I AI K GYL++ F ++ P R
Sbjct: 149 ARAQLQKKIDAALIAAIKKDAQGKEKAGYLRSVFTVKPGDAPHR 192
>UniRef50_UPI0000DC20AA Cluster: UPI0000DC20AA related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC20AA UniRef100 entry -
Rattus norvegicus
Length = 261
Score = 67.7 bits (158), Expect = 3e-10
Identities = 62/203 (30%), Positives = 97/203 (47%)
Frame = -1
Query: 625 LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVC 446
+ V+K + G+KNGGT V L++ K + + + + S P KH + + N TV
Sbjct: 86 VATVIKTVSGDKNGGTGVVKLQKMKMYLGSCKAMAKS----PAFKHEKAVC-NSTPETVL 140
Query: 445 ILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPK 266
I++ G+H +RVV + L G LL+TGP A N L R Q+ V+ TST I+
Sbjct: 141 IIITGQH--RRVVFLKQLSRGFLLITGPLALNLVLLYRTHQKSVVITSTTINTQ------ 192
Query: 265 HFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPD 86
D YF + IF +K+KY +Q K D KT+D ++ P
Sbjct: 193 --TDVYF----KMKQLHKPRHQQGKIFDMEKDKY-GIKQCKADHKTLDSQIL------PK 239
Query: 85 KKVLRGYLKAAFGLRSSQEPXRL 17
+K+ +L ++F L + P +L
Sbjct: 240 RKL---FLNSSFSLANGMCPHKL 259
>UniRef50_A5C5P0 Cluster: 60S ribosomal protein L6; n=1; Vitis
vinifera|Rep: 60S ribosomal protein L6 - Vitis vinifera
(Grape)
Length = 249
Score = 60.9 bits (141), Expect = 3e-08
Identities = 32/75 (42%), Positives = 41/75 (54%)
Frame = -1
Query: 418 KRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXX 239
KRVV + L SGLLL+TG F N PLRR+ Q YVI TST++ + + K F+D YF
Sbjct: 156 KRVVFLKQLSSGLLLITGSFKINGVPLRRVNQAYVIATSTKVDIPKVNVEK-FDDKYFAK 214
Query: 238 XXXXXXXXXXXKEGD 194
+GD
Sbjct: 215 KVQKKRRSWALDKGD 229
>UniRef50_A2EBD1 Cluster: 60S ribosomal protein L6, putative; n=7;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 151
Score = 54.8 bits (126), Expect = 2e-06
Identities = 27/63 (42%), Positives = 39/63 (61%)
Frame = -1
Query: 475 RPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTR 296
RP+LK+GTV I++ G H GKR V+V +G++ + GP P+ I Q Y+I TST
Sbjct: 53 RPSLKVGTVVIVVGGEHQGKRAVVVADQGAGIVKIAGPVV----PVNEISQDYLIATSTS 108
Query: 295 ISL 287
I +
Sbjct: 109 IEV 111
>UniRef50_Q8SR91 Cluster: 60S RIBOSOMAL PROTEIN L6; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L6 -
Encephalitozoon cuniculi
Length = 155
Score = 48.4 bits (110), Expect = 2e-04
Identities = 31/82 (37%), Positives = 45/82 (54%)
Frame = -1
Query: 532 EKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAF 353
EK +A + +P VRR +L G V ++L G A +RVV + L + L GP +
Sbjct: 10 EKYKARTARKP---RVRRT--DLVKGMVVVVLEGVFASRRVVYLKGLEDNIALCAGPKSI 64
Query: 352 NSCPLRRIPQRYVIGTSTRISL 287
N PL RI +RY++ TST + L
Sbjct: 65 NGIPLFRIDERYLLATSTVLDL 86
>UniRef50_A0EZZ8 Cluster: 60S ribosomal protein L6; n=5;
Euteleostomi|Rep: 60S ribosomal protein L6 -
Scophthalmus maximus (Turbot)
Length = 54
Score = 44.4 bits (100), Expect = 0.003
Identities = 24/55 (43%), Positives = 32/55 (58%)
Frame = -1
Query: 175 KEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQEPXRLRF 11
KEKY +EQRK DQK VD ++ + P LRGYL+++F L P +L F
Sbjct: 3 KEKYQLTEQRKEDQKAVDAQLLTLVKKTPQ---LRGYLRSSFCLSGGVYPHKLVF 54
>UniRef50_Q98RL7 Cluster: 60S ribosomal protein L6B; n=1; Guillardia
theta|Rep: 60S ribosomal protein L6B - Guillardia theta
(Cryptomonas phi)
Length = 169
Score = 44.0 bits (99), Expect = 0.004
Identities = 25/74 (33%), Positives = 38/74 (51%)
Frame = -1
Query: 469 NLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRIS 290
+ KIG + I+ + GK+ V +G G LL++G FN +I +YV+ + +
Sbjct: 41 DFKIGDILIIKKRNNYGKKCVFLGHTDDGNLLLSGIMKFNGIGYLKIHWKYVVKSGVSLK 100
Query: 289 LGNFKLPKHFNDDY 248
NF L KH N DY
Sbjct: 101 GLNF-LTKHTNKDY 113
>UniRef50_Q8U2L5 Cluster: 50S ribosomal protein L14e; n=5;
Archaea|Rep: 50S ribosomal protein L14e - Pyrococcus
furiosus
Length = 83
Score = 40.7 bits (91), Expect = 0.034
Identities = 18/53 (33%), Positives = 33/53 (62%)
Frame = -1
Query: 472 PNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYV 314
P + +G + +++AGR AG++VV+V I+ +LVTG N RR+ +++
Sbjct: 2 PAIDVGRIAVVIAGRRAGQKVVVVDIIDKNFVLVTGA-GLNKVKRRRMNIKHI 53
>UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L27 -
Giardia lamblia ATCC 50803
Length = 135
Score = 39.9 bits (89), Expect = 0.060
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = -1
Query: 475 RPNLKIGTVCILLAGRHAGKRVVLVGILP 389
+P +K G VCI+L GRHAGK+ V+V LP
Sbjct: 3 QPIIKPGLVCIVLQGRHAGKKAVIVEALP 31
>UniRef50_P54054 Cluster: 50S ribosomal protein L14e; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L14e -
Methanococcus jannaschii
Length = 80
Score = 39.5 bits (88), Expect = 0.079
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = -1
Query: 472 PNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRI 329
P +++G VCI AGR AGK V+V IL ++V G C ++ +
Sbjct: 2 PAIEVGRVCIKTAGREAGKVCVIVDILDKNFVIVDGLVKRRRCNIKHL 49
>UniRef50_A7QIH5 Cluster: Chromosome chr12 scaffold_103, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_103, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 345
Score = 39.1 bits (87), Expect = 0.10
Identities = 26/69 (37%), Positives = 39/69 (56%)
Frame = -1
Query: 547 FYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVT 368
FYP + ++ + +K ++ +R ++ GTV I+LAGR VV + L SGLLL+T
Sbjct: 207 FYPADD-VKKPLINKHKAKPIK-LRASITPGTVLIILAGR-----VVFLKQLSSGLLLIT 259
Query: 367 GPFAFNSCP 341
G F N P
Sbjct: 260 GSFKINDVP 268
>UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14;
Archaea|Rep: 50S ribosomal protein L14e - Pyrobaculum
aerophilum
Length = 103
Score = 38.3 bits (85), Expect = 0.18
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = -1
Query: 466 LKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISL 287
+ IG V + + GR AG++ V+V I+ +++TGP RR+ ++ T +I +
Sbjct: 5 IDIGRVVVKVLGREAGRKAVVVDIVDENYVVITGPKPITGVKRRRVNINHIEPTDKKIDI 64
>UniRef50_A2RKU3 Cluster: Cation-transporting ATPase; n=2;
Lactococcus lactis subsp. cremoris|Rep:
Cation-transporting ATPase - Lactococcus lactis subsp.
cremoris (strain MG1363)
Length = 841
Score = 35.9 bits (79), Expect = 0.97
Identities = 16/44 (36%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Frame = -1
Query: 415 RVVLVGILPSGLLLVTGPFAFNSCPLRRIPQR--YVIGTSTRIS 290
+++++GI+P +L++ F F+S L IPQR +IGT+ I+
Sbjct: 215 KIIVIGIIPISILVLLNQFVFSSLDLSVIPQRKTAIIGTAATIT 258
>UniRef50_Q8BTI8 Cluster: Serine/arginine repetitive matrix protein 2;
n=41; root|Rep: Serine/arginine repetitive matrix protein
2 - Mus musculus (Mouse)
Length = 2703
Score = 35.9 bits (79), Expect = 0.97
Identities = 27/109 (24%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Frame = -2
Query: 327 LSAM*SAPPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTF-HLS 151
L+A+ A S++S+ ++S +S S+S+ S++ +SLP + +
Sbjct: 2475 LAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPAQPEVALKRVP 2534
Query: 150 SAKPIRRQSTRL*SKPSEPDPTRRCSADTSKRPSDSARAKSPXGCASKS 4
S P+ +++ R +P EP P +R +S S S+ + S +S S
Sbjct: 2535 SPTPVPKEAIRE-GRPQEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSS 2582
>UniRef50_Q91238 Cluster: High molecular weight basic nuclear
protein; n=2; Pseudopleuronectes americanus|Rep: High
molecular weight basic nuclear protein -
Pseudopleuronectes americanus (Winter flounder)
(Pleuronectesamericanus)
Length = 326
Score = 33.9 bits (74), Expect = 3.9
Identities = 27/100 (27%), Positives = 44/100 (44%)
Frame = -2
Query: 324 SAM*SAPPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSA 145
SA+ S P S Q M S +RS S +S + R S P+++ T + +
Sbjct: 42 SAIRSRSPSRSKSPKRRVQTPKMRAKSP-MRSRSPSRSKSPRRSKS-PKRRVQTPKMRAT 99
Query: 144 KPIRRQSTRL*SKPSEPDPTRRCSADTSKRPSDSARAKSP 25
P+R +S P T + A++++RP R+ SP
Sbjct: 100 SPMRSRSPSRYKSPKRSVKTPKTRANSARRPKSPMRSPSP 139
>UniRef50_Q4ZTN3 Cluster: Sensor protein; n=5; Pseudomonas|Rep:
Sensor protein - Pseudomonas syringae pv. syringae
(strain B728a)
Length = 676
Score = 33.9 bits (74), Expect = 3.9
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = -1
Query: 508 GRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFN 350
GR ++ R++RP LK+ + + G +A V G L +G+ L+T PFAF+
Sbjct: 617 GRQLAEIARQLRPELKV----LFITG-YAEHAAVRGGFLDTGMQLITKPFAFD 664
>UniRef50_Q2HF67 Cluster: Putative uncharacterized protein; n=2;
Pezizomycotina|Rep: Putative uncharacterized protein -
Chaetomium globosum (Soil fungus)
Length = 240
Score = 33.9 bits (74), Expect = 3.9
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Frame = -2
Query: 285 ATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIRRQSTRL*S- 109
A + T ++ SRR S V S R+ S+P + RN +P ++Q T S
Sbjct: 20 APTRTSATLSLLCSRRHLPVS-VASTTTRLAHSIP-RPRNGSPFGQKQPQQQQQTITPSP 77
Query: 108 KPSEPDPTRRCSADTSKRPS-DSARAK 31
PSEP PT +A +S +P DS + +
Sbjct: 78 SPSEPSPTAPATATSSPQPQPDSTQTQ 104
>UniRef50_A7ET80 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 752
Score = 33.9 bits (74), Expect = 3.9
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = -1
Query: 592 KNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLK 461
K R LK SF P + + ASS GRP K +R+R LK
Sbjct: 128 KEDHNREEELKAMVSFMPHRPAVDASSSGRPMKKDSKRMRNGLK 171
>UniRef50_Q2EG98 Cluster: Polycystic kidney disease 1-like 3 variant
1a; n=16; Theria|Rep: Polycystic kidney disease 1-like 3
variant 1a - Mus musculus (Mouse)
Length = 2201
Score = 33.5 bits (73), Expect = 5.2
Identities = 24/96 (25%), Positives = 37/96 (38%)
Frame = -2
Query: 312 SAPPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIR 133
SAPP H T +TS + S+S Q + +S P + + SS+ P
Sbjct: 209 SAPPKATHRMTITSLTGRPQVTSDTLASSSPPQGTSDTPASSSPPQVTSATSASSSPPQG 268
Query: 132 RQSTRL*SKPSEPDPTRRCSADTSKRPSDSARAKSP 25
T S P + S+ + SD+ + SP
Sbjct: 269 TSDTPASSSPPQVTSATSASSSPPQVTSDTPASSSP 304
>UniRef50_Q5QLZ3 Cluster: Gastric mucin-like protein; n=4; Oryza
sativa|Rep: Gastric mucin-like protein - Oryza sativa
subsp. japonica (Rice)
Length = 579
Score = 33.5 bits (73), Expect = 5.2
Identities = 25/90 (27%), Positives = 42/90 (46%)
Frame = -2
Query: 300 PEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIRRQST 121
P ++ S S +I+S S N ++ + P K+ +T LSS+KP S
Sbjct: 73 PARSNSVSRPSIQSTLISSNNRSSVVNASISSVCSPPTTPSKRTST--LSSSKPSVPASR 130
Query: 120 RL*SKPSEPDPTRRCSADTSKRPSDSARAK 31
++ ++PS P TR C+ RPS + +
Sbjct: 131 QVPTRPSTPTKTRPCT-PVKPRPSTPVKPR 159
>UniRef50_A0JCX9 Cluster: Putative uncharacterized protein; n=1;
Glyptapanteles indiensis|Rep: Putative uncharacterized
protein - Glyptapanteles indiensis
Length = 1065
Score = 33.5 bits (73), Expect = 5.2
Identities = 24/83 (28%), Positives = 44/83 (53%)
Frame = -2
Query: 297 EFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIRRQSTR 118
++ S N ++I S + N QSN++ + T++P K+N+ H S+ P+ Q++
Sbjct: 523 QYMSINQNSFKQDLLIGSPE-NNIYNHQSNSRTIRTTIPSMKQNSTHPSN--PM-HQTSE 578
Query: 117 L*SKPSEPDPTRRCSADTSKRPS 49
L S+ + P ++ S S RPS
Sbjct: 579 L-SQQRQSQPNQQDSQQHSHRPS 600
>UniRef50_Q5KML3 Cluster: VpsB, putative; n=2; Basidiomycota|Rep:
VpsB, putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 686
Score = 33.5 bits (73), Expect = 5.2
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +3
Query: 393 RIPTSTTLLPACLPARRMQTVPIFRLGRILRTCLLNGRPPDEARI 527
R+P+ L A L A R Q P ++ +++ T + NG PP+ AR+
Sbjct: 397 RVPSPNKLRLAILYALRYQKSPSAQIPQVVSTLISNGVPPERARL 441
>UniRef50_A7E738 Cluster: Predicted protein; n=1; Sclerotinia
sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
sclerotiorum 1980
Length = 331
Score = 33.5 bits (73), Expect = 5.2
Identities = 29/89 (32%), Positives = 42/89 (47%)
Frame = -2
Query: 309 APPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIRR 130
AP S+TS+ QN S +SR ++++S+ S AKR K T SS+ P +R
Sbjct: 15 APSSTNGSSTSSAQNASGT-SSRTVKTSSS--SPAKRGDVKESSKPSRTVTASSSSPAKR 71
Query: 129 QSTRL*SKPSEPDPTRRCSADTSKRPSDS 43
SKPS T+ S+ S D+
Sbjct: 72 DDVNESSKPSR---TKAASSSNSAGGGDN 97
>UniRef50_Q7NID4 Cluster: Gll2249 protein; n=8; Cyanobacteria|Rep:
Gll2249 protein - Gloeobacter violaceus
Length = 544
Score = 32.7 bits (71), Expect = 9.0
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = -1
Query: 418 KRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDD 251
+ +V G + GL+L F S PL Q + +G +T +G LP+HFNDD
Sbjct: 41 QEIVTCGQVLKGLIL--NGLGFVSAPLYLFEQ-FFVGKATEHLIGPGVLPEHFNDD 93
>UniRef50_Q0J1B9 Cluster: Os09g0451700 protein; n=2; Oryza sativa
(japonica cultivar-group)|Rep: Os09g0451700 protein -
Oryza sativa subsp. japonica (Rice)
Length = 180
Score = 32.7 bits (71), Expect = 9.0
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -2
Query: 111 SKPSEPDPTRRCSADTSKRPS 49
++ S P+PTR CSA+ SKRPS
Sbjct: 13 TRSSPPNPTRTCSAEHSKRPS 33
>UniRef50_A2DQF0 Cluster: Surface protein, putative; n=1;
Trichomonas vaginalis G3|Rep: Surface protein, putative
- Trichomonas vaginalis G3
Length = 827
Score = 32.7 bits (71), Expect = 9.0
Identities = 19/87 (21%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = -2
Query: 282 TSNCQNTSMMITSRRIRSASNVQSNAK-RVMTSLPQKKRNTFHLSSAKPIRRQSTRL*SK 106
T+N +S++ ++R+ + N + A+ V+ S+P+ T + KP+ +++ +
Sbjct: 193 TANAPESSLIPPAQRLENMLNQNAPAQPAVVKSVPKITVQTTQTQTKKPVPQETPKSQEP 252
Query: 105 PSEPDPTRRCSADTSKRPSDSARAKSP 25
P +P+P + A K P + + P
Sbjct: 253 PKQPEPAKPAVA-PPKPPEEVPKPAEP 278
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 698,089,624
Number of Sequences: 1657284
Number of extensions: 14591627
Number of successful extensions: 44585
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 42481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44482
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56198352344
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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