Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_O07
(662 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1596 + 34684943-34686340,34688085-34688175,34688290-346883... 31 0.82
12_01_0076 + 627796-627877,628706-628944,629129-629326,629415-62... 30 1.4
04_03_0703 - 18870287-18871351,18871542-18871733 30 1.4
06_01_1173 + 10014391-10014678,10015478-10017245,10017333-100174... 30 1.9
03_01_0476 - 3660327-3661261,3661401-3661668 29 2.5
05_07_0145 + 28012268-28012624,28012734-28012794,28013758-280138... 29 3.3
03_05_0826 - 27994004-27994966,27995053-27996030,27996101-27996478 29 3.3
12_02_0202 - 15465885-15466241,15466539-15468122 29 4.4
09_01_0067 + 1001137-1002708,1003476-1003529 29 4.4
05_01_0273 + 2115257-2115589,2115706-2115766,2115876-2115970,211... 29 4.4
03_01_0313 - 2476171-2476569 29 4.4
08_01_0433 + 3794440-3794948,3795696-3796707 28 5.8
07_03_1323 + 25813770-25814006,25814147-25814287,25814465-258145... 28 5.8
05_04_0247 + 19358929-19359187,19360439-19360639,19361426-193615... 28 5.8
04_04_0959 + 29692740-29693035,29693102-29693267,29693433-296936... 28 5.8
03_05_0337 - 23272845-23273271,23273318-23273526,23275615-23276298 28 5.8
03_01_0522 - 3919120-3919696,3919835-3919919,3919955-3919985,392... 28 5.8
02_01_0521 + 3768072-3768239,3768280-3768337,3769197-3769659,376... 28 5.8
01_02_0039 - 10490522-10490606,10490674-10490810,10491107-104912... 28 5.8
12_01_0551 + 4446937-4447353,4449141-4450013,4451206-4451244,445... 28 7.6
11_02_0013 + 7350329-7350817 28 7.6
08_01_0185 + 1558580-1558755,1558848-1559737,1559828-1559919,156... 28 7.6
07_03_0149 - 14452654-14452666,14452943-14454699,14454886-144549... 28 7.6
03_05_0828 - 28021095-28021694 28 7.6
02_04_0114 + 19879468-19880671,19882007-19882179,19882265-198826... 28 7.6
02_02_0681 + 12892728-12893850,12894411-12894529 28 7.6
01_05_0478 - 22587881-22588021,22588126-22588266,22588436-225886... 28 7.6
>04_04_1596 +
34684943-34686340,34688085-34688175,34688290-34688354,
34688530-34688581,34688747-34688829,34688942-34689035,
34689468-34690051
Length = 788
Score = 31.1 bits (67), Expect = 0.82
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Frame = +1
Query: 253 DLCETRRPFTVSSRISFVSTSLNSETSMCL---GRSDFFLWLFLSPLNVGFAWNLSMDEW 423
DL ++ + +SS + + TS CL +D+ + +P++ F + S+DE
Sbjct: 459 DLSWSKSQYLLSSSMDKTVKLWDITTSTCLKTFSHTDYVTCIQFNPVDDNFFISGSLDEK 518
Query: 424 VSLRGSCSWSRHSFRNTQISFAFMS 498
V+L GS S H F T+ + S
Sbjct: 519 VALVGSHKGSCHLFDTTEKKLQYKS 543
>12_01_0076 +
627796-627877,628706-628944,629129-629326,629415-629474,
629596-629739,631700-631864,632636-632734,633114-633182,
633274-633370,633994-634085,635021-635152,635446-635526,
636284-636400,636497-636598
Length = 558
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = -1
Query: 257 KSQSNVCVLCEFVLKEIDDQIKDKHNDDEIKKAVHGICKHMPKSVSAECDQFVEKYADLV 78
KS+S CV C ++ EI ++KD + EI + + C + + +C + V +Y LV
Sbjct: 148 KSEST-CVFCHHIIDEIMSKLKDPDAEFEIIQLLLKECNKI-EGHQQQCKRMVLQYVPLV 205
>04_03_0703 - 18870287-18871351,18871542-18871733
Length = 418
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -3
Query: 504 GGRHEREGDLRVPEAVSGPTARSPQADPLVHRQVPREADIERR 376
GG R V AV+ P + + DP++H+ +P I RR
Sbjct: 77 GGPRARARARAVAAAVAAPPHITSETDPMLHKSIPNGGRIARR 119
>06_01_1173 +
10014391-10014678,10015478-10017245,10017333-10017436,
10017632-10017706,10017887-10017918,10019396-10019482,
10020848-10021294,10021477-10021630,10022203-10022329,
10022547-10022632,10022719-10022790,10023083-10023286,
10023732-10024049
Length = 1253
Score = 29.9 bits (64), Expect = 1.9
Identities = 29/99 (29%), Positives = 38/99 (38%), Gaps = 4/99 (4%)
Frame = -3
Query: 615 GEHSQ-GSGRSLHAALPETAERVHRLRGHVLESA-RRDAGGRHEREGDLRVPEAVSGPTA 442
GEH + S+H +P T L G V S+ DAG E D+ PE S P
Sbjct: 517 GEHRKLQESASVHGRIPSTVMMQENLNGKVASSSNNEDAGQIFESSRDVSRPEK-SKPVV 575
Query: 441 RSPQADPLVHRQ--VPREADIERRQEQPQEEVASAQTHA 331
P L+ Q V + Q E V+S + A
Sbjct: 576 SCPLTFSLLSGQSMVTSSQQLRPGWSQSTEMVSSQEPSA 614
>03_01_0476 - 3660327-3661261,3661401-3661668
Length = 400
Score = 29.5 bits (63), Expect = 2.5
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 7/100 (7%)
Frame = -3
Query: 606 SQGSGRSLHAALPETAERVHRLRGHVLESARRDA--GGRH--EREGDLR-VPEA-VSGPT 445
++G G H A + E R GH +SA+ A GR ++ GD + EA SG +
Sbjct: 55 TEGLGLKHHVADVDEEEDAARKAGHAAKSAQHTASEAGRQTSKKAGDAKEAAEATASGAS 114
Query: 444 ARSPQADPLVHRQVPREA-DIERRQEQPQEEVASAQTHAG 328
+++ QA A + RR EQ + + A AG
Sbjct: 115 SKAEQAKEKTKEAAKGAAGEATRRAEQAKHKTKEAAEAAG 154
>05_07_0145 +
28012268-28012624,28012734-28012794,28013758-28013852,
28013944-28014056,28014436-28014604,28014677-28014716,
28014797-28014861,28015485-28015598,28015687-28015751,
28015927-28016083,28016167-28016286,28016447-28016535,
28016631-28016715
Length = 509
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -1
Query: 563 LQSECIDFVDTYSSQLVEMLVADMNAKEICVFLKLC 456
+ EC V Y Q++++L+A+ +IC + LC
Sbjct: 316 VSQECKTVVSQYGQQILDLLLAETQPSKICSQVGLC 351
>03_05_0826 - 27994004-27994966,27995053-27996030,27996101-27996478
Length = 772
Score = 29.1 bits (62), Expect = 3.3
Identities = 24/86 (27%), Positives = 40/86 (46%)
Frame = -1
Query: 602 KALDGLCTRLSQKLQSECIDFVDTYSSQLVEMLVADMNAKEICVFLKLCRDQLHDPLKLT 423
+A DGL S+ L + C D+V SS + L ++++ +L P+
Sbjct: 89 RAFDGLAAPFSEFLGTACADWVMPTSSAPRQTLSSNIHRNSSRPGTPAPSGRLLCPI-TP 147
Query: 422 HSSIDKFHAKPTLRGDRNNHRKKSLL 345
HS+ + A+ +R R N R +SLL
Sbjct: 148 HSNTLERAAEKLVRSSRQNARARSLL 173
>12_02_0202 - 15465885-15466241,15466539-15468122
Length = 646
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -1
Query: 179 DDEIKKAVHGIC-KHMPKSVSAECDQFVEKYADLVSAXRATRIGPER 42
DDE + + G+ K MPK CD+F Y DL AT G ++
Sbjct: 511 DDECLQNLKGVMTKAMPKLCVTICDKFTFSYQDLNQQFYATCHGVDK 557
>09_01_0067 + 1001137-1002708,1003476-1003529
Length = 541
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = -1
Query: 161 AVHGICKHMP--KSVSAECDQFVEKYADLVSAXRATRIGPERRMRRIEMMQTRI 6
A+ GI P ++ +CD+ E AD A A R+GP +RR+++ R+
Sbjct: 102 ALPGILARFPAVSKLALKCDRRAESVADPTLALLADRLGP--ALRRLKLRSIRL 153
>05_01_0273 +
2115257-2115589,2115706-2115766,2115876-2115970,
2116072-2116184,2116278-2116551,2116923-2117036,
2117169-2117233,2117325-2117466,2117547-2117666,
2118153-2118241,2118349-2118433
Length = 496
Score = 28.7 bits (61), Expect = 4.4
Identities = 9/36 (25%), Positives = 21/36 (58%)
Frame = -1
Query: 563 LQSECIDFVDTYSSQLVEMLVADMNAKEICVFLKLC 456
+ +EC + V Y ++ +L+A + +++C + LC
Sbjct: 308 ISTECKEVVSEYGEMILNLLIAQTDPQKVCSQVGLC 343
>03_01_0313 - 2476171-2476569
Length = 132
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 6/57 (10%)
Frame = -3
Query: 507 AGGRHEREGDLRV------PEAVSGPTARSPQADPLVHRQVPREADIERRQEQPQEE 355
AGGR DL + P + P R ADP + R+V + + R+ P EE
Sbjct: 5 AGGRRFSSTDLLLRRPAIAPGSTEPPLRRQGAADPPLRREVAGSGEEQERRRHPDEE 61
>08_01_0433 + 3794440-3794948,3795696-3796707
Length = 506
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +2
Query: 218 GRIRKEHRRCSETCARRGDRSPCRPGSRS 304
GRIR+ C RRG R C PG RS
Sbjct: 11 GRIRRRRHALRRACWRRGGR--CEPGWRS 37
>07_03_1323 +
25813770-25814006,25814147-25814287,25814465-25814536,
25815022-25815135,25815431-25815484,25815644-25815745,
25815830-25815907,25816113-25816182,25816577-25816647,
25816764-25816856,25817306-25817374
Length = 366
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -1
Query: 176 DEIKKAVHGICKHMPKS-VSAECDQFVEKYADLV 78
DE+++AV G+ KH P + VS C ++K D V
Sbjct: 125 DEMREAVRGVAKHFPTAIVSGRC---IDKVFDFV 155
>05_04_0247 +
19358929-19359187,19360439-19360639,19361426-19361592,
19361819-19362089,19362550-19362818
Length = 388
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = -1
Query: 656 VEQXESVLKNNRSEENIRKALDGLCTRLSQKLQSECIDFVDTYS 525
+++ V K+NR + L LCT+L + I +VD Y+
Sbjct: 244 LDELRCVAKHNRVAKLFNLQLHALCTKLRGEFAGASITYVDIYT 287
>04_04_0959 +
29692740-29693035,29693102-29693267,29693433-29693612,
29693703-29693771,29693888-29694088,29694187-29694240,
29694325-29694386,29694488-29694620,29694789-29694899,
29695008-29695104,29695638-29695714,29696129-29696194,
29696431-29696583,29697392-29697447,29697524-29697584,
29697656-29697766,29698010-29698144,29698217-29698447,
29699001-29699075,29699161-29699282,29699381-29699453,
29699538-29699642,29699728-29699895,29700079-29700148,
29700224-29700375,29700574-29700651,29700744-29700836,
29700961-29701098,29701237-29701276,29701350-29701423,
29701777-29701911,29702345-29702464,29702778-29702939
Length = 1287
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/41 (43%), Positives = 19/41 (46%)
Frame = +2
Query: 191 LLFGRRFPSGRIRKEHRRCSETCARRGDRSPCRPGSRSFRR 313
LL R+ P GR RC TC RR RS R R RR
Sbjct: 43 LLPERQAPEGRRPLAASRCLPTCLRRHRRSSRRSHRRCRRR 83
>03_05_0337 - 23272845-23273271,23273318-23273526,23275615-23276298
Length = 439
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = -3
Query: 579 AALPETAERVHRLR---GHVLESARRDAGGRHEREGDLR 472
A LP+ R RLR GH + + D G R R GD+R
Sbjct: 352 AVLPDAVRRRRRLRVEEGHRVADHQHDDGRRAVRRGDVR 390
>03_01_0522 -
3919120-3919696,3919835-3919919,3919955-3919985,
3920078-3920158,3920271-3920338,3920645-3920698,
3921023-3922379
Length = 750
Score = 28.3 bits (60), Expect = 5.8
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Frame = -1
Query: 308 ETNEILDDTVNGRRVSHKSQSNVCVLCEF--VLKEID-DQIKDKHNDDEIKKAVHGICKH 138
+T ++L NGR + CVLC VL E D +Q+ DDE+ I +
Sbjct: 419 KTIKVLKPYCNGRHIPFVQMFRSCVLCHHLTVLPETDSEQLVQALKDDELDNGPENIGRF 478
Query: 137 MPKS 126
+ S
Sbjct: 479 IETS 482
>02_01_0521 +
3768072-3768239,3768280-3768337,3769197-3769659,
3769736-3769990,3770763-3770934,3772260-3772910,
3773659-3774045,3774123-3774155,3774239-3774307,
3774388-3774463,3775135-3775223,3775442-3775615,
3775693-3775821
Length = 907
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = -1
Query: 224 FVLKEIDDQIKDKHNDDEIKKAVHGICKHMPKSVSAECDQF 102
+ LKE D H DD + + V +MP EC F
Sbjct: 701 YTLKEFSTPHADHHMDDLVHRLVGRTRAYMPTDAQRECGMF 741
>01_02_0039 -
10490522-10490606,10490674-10490810,10491107-10491248,
10491355-10491419,10491528-10491641,10491846-10492119,
10492215-10492327,10492405-10492499,10492602-10492662,
10492774-10493103
Length = 471
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -1
Query: 554 ECIDFVDTYSSQLVEMLVADMNAKEICVFLKLC 456
EC V Y ++EML+A + ++C + LC
Sbjct: 310 ECKQVVRDYGDMILEMLIAQASPMKLCSQIGLC 342
>12_01_0551 +
4446937-4447353,4449141-4450013,4451206-4451244,
4452339-4452581
Length = 523
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/47 (31%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Frame = -1
Query: 656 VEQXESVLK--NNRSEENIRKALDGLCTRLSQKLQSEC-IDFVDTYS 525
VE +S+ K NN + +++R +DG+ +R S ++S+ +D ++ YS
Sbjct: 204 VELMDSITKGTNNNARKDLRTLVDGILSRTSIYIKSDKELDMMNIYS 250
>11_02_0013 + 7350329-7350817
Length = 162
Score = 27.9 bits (59), Expect = 7.6
Identities = 25/76 (32%), Positives = 29/76 (38%), Gaps = 4/76 (5%)
Frame = -3
Query: 615 GEHSQGSGRSLHAALPETAERVHRLRGHVLESARRDAGGRHEREGDLRVPEAVSGPTARS 436
G QGSG+ A R R RG RR A R R P AV PT ++
Sbjct: 73 GARGQGSGQRRRIATGRERRRRKR-RGR----GRRKAAAGGGRRSSRRAPTAVGSPTKKT 127
Query: 435 ----PQADPLVHRQVP 400
P A+P Q P
Sbjct: 128 LFYCPWAEPHSELQCP 143
>08_01_0185 +
1558580-1558755,1558848-1559737,1559828-1559919,
1560018-1560086,1560218-1560316
Length = 441
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +3
Query: 303 RFDVTEFRNQHVFGQKRLLPVVVPVASQCRLRVELVY 413
RFD QH FG+K L +VVP + V +VY
Sbjct: 91 RFDRYHELGQHAFGEKLGLWIVVPQQLVVEVGVNIVY 127
>07_03_0149 -
14452654-14452666,14452943-14454699,14454886-14454990,
14455808-14455978,14456309-14456641,14456900-14457492,
14458864-14458906
Length = 1004
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/86 (20%), Positives = 37/86 (43%)
Frame = -1
Query: 329 VSEFSDVETNEILDDTVNGRRVSHKSQSNVCVLCEFVLKEIDDQIKDKHNDDEIKKAVHG 150
+S DV+ +DD N H+ +VC +C ++++ + I + + +
Sbjct: 330 MSNEKDVDDENEMDDDCNHDIRIHEDLGHVCRICGMIVRKAETIIDYQWKKKNLLWGIFS 389
Query: 149 ICKHMPKSVSAECDQFVEKYADLVSA 72
+ K+ K S F+ Y D+ +A
Sbjct: 390 LLKYFLKWESV----FITNYIDIDTA 411
>03_05_0828 - 28021095-28021694
Length = 199
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 218 GRIRKEHRRCSETCARRGDRSPCRPGS 298
G+++ RRCS ARRGDR R GS
Sbjct: 81 GQVKGRPRRCSG--ARRGDRPAARAGS 105
>02_04_0114 +
19879468-19880671,19882007-19882179,19882265-19882605,
19882698-19882977,19883070-19883267,19883380-19883652
Length = 822
Score = 27.9 bits (59), Expect = 7.6
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -3
Query: 600 GSGRSLHAALPETAERVHRLRGHVLESARRDAGGRHEREGDLRVPE-AVSGPTA 442
GSG S AA P VHR G S+R +GG+H R G L + +V GP +
Sbjct: 63 GSGPSSAAAAP----LVHRSHGRA--SSRPRSGGKHLRAGHLSSSQWSVWGPAS 110
>02_02_0681 + 12892728-12893850,12894411-12894529
Length = 413
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/55 (27%), Positives = 30/55 (54%)
Frame = +1
Query: 274 PFTVSSRISFVSTSLNSETSMCLGRSDFFLWLFLSPLNVGFAWNLSMDEWVSLRG 438
P ++ + + STS +S+ ++ L +D L + +V W SMD+W+++ G
Sbjct: 286 PKSILDQCLWESTSTDSDATVALAPADR-LRALSAGASVAPDWTWSMDDWIAVCG 339
>01_05_0478 -
22587881-22588021,22588126-22588266,22588436-22588643,
22589199-22589238,22589425-22589647,22590826-22590970,
22591053-22591156,22591298-22591396,22591506-22591684,
22591948-22592167
Length = 499
Score = 27.9 bits (59), Expect = 7.6
Identities = 22/83 (26%), Positives = 37/83 (44%)
Frame = -1
Query: 395 KPTLRGDRNNHRKKSLLPKHMLVSEFSDVETNEILDDTVNGRRVSHKSQSNVCVLCEFVL 216
+PT +GD KK + K + V F D E E ++ + + KS +V F+
Sbjct: 184 EPTAKGDIEGKSKKKAV-KQLNVLSFGD-EVEEEENEAASSVKDKIKSIHDVLDDPRFLK 241
Query: 215 KEIDDQIKDKHNDDEIKKAVHGI 147
E D+ K +D+ K+ V +
Sbjct: 242 GEAPDEQLTKEQEDKKKETVQSV 264
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,102,694
Number of Sequences: 37544
Number of extensions: 337400
Number of successful extensions: 1471
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1470
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1667659452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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