Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_O07
(662 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006833-9|AAF60943.1| 318|Caenorhabditis elegans Saposin-like ... 36 0.019
U40797-2|AAB37549.2| 429|Caenorhabditis elegans Saposin-like pr... 36 0.034
U40797-3|AAB37550.2| 238|Caenorhabditis elegans Saposin-like pr... 35 0.059
Z66566-2|CAA91485.1| 537|Caenorhabditis elegans Hypothetical pr... 32 0.42
Z66566-1|CAA91484.1| 515|Caenorhabditis elegans Hypothetical pr... 32 0.42
X60233-1|CAA42793.1| 537|Caenorhabditis elegans LIN-14A protein. 32 0.42
X60232-1|CAA42792.1| 515|Caenorhabditis elegans LIN-14B2 protein. 32 0.42
X60231-1|CAA42791.1| 539|Caenorhabditis elegans LIN-14B1 protein. 32 0.42
Z50742-4|CAA90617.1| 498|Caenorhabditis elegans Hypothetical pr... 30 1.3
AC024826-14|AAF60791.1| 332|Caenorhabditis elegans Mrna decappi... 30 1.3
U70852-14|AAM98014.1| 783|Caenorhabditis elegans Gei-4(four) in... 30 1.7
U70852-13|AAM98015.1| 788|Caenorhabditis elegans Gei-4(four) in... 30 1.7
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 29 2.2
U40417-4|AAM69087.1| 100|Caenorhabditis elegans Saposin-like pr... 29 2.2
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 29 2.2
U40800-8|ABB51192.1| 349|Caenorhabditis elegans Hypothetical pr... 29 2.9
U40800-7|AAA81493.2| 343|Caenorhabditis elegans Hypothetical pr... 29 2.9
AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical... 29 2.9
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 29 2.9
Z50742-3|CAA90615.1| 492|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z66567-4|CAA91493.2| 618|Caenorhabditis elegans Hypothetical pr... 28 5.1
U40417-6|AAA81415.2| 90|Caenorhabditis elegans Saposin-like pr... 28 5.1
Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z69637-3|CAA93468.1| 173|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z29094-3|CAA82343.1| 358|Caenorhabditis elegans Hypothetical pr... 28 6.8
U00055-5|AAL06044.4| 1182|Caenorhabditis elegans Hypothetical pr... 28 6.8
U38937-1|AAA93079.1| 441|Caenorhabditis elegans LIN-1 protein. 27 9.0
U38935-1|AAB60254.1| 441|Caenorhabditis elegans LIN-1 protein. 27 9.0
AF067606-1|AAC17530.3| 441|Caenorhabditis elegans Abnormal cell... 27 9.0
>AC006833-9|AAF60943.1| 318|Caenorhabditis elegans Saposin-like
protein family protein7 protein.
Length = 318
Score = 36.3 bits (80), Expect = 0.019
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = -1
Query: 662 FAVEQXESVLKNN--RSEENIRKALDGLCTRLSQKLQSECIDFVDTYSSQLVEMLVADMN 489
F Q SV K+ SE +R L C L + +C FV+T ++ + D++
Sbjct: 49 FMCTQLLSVTKHRVGLSENQLRNQLYEKCRVLPSVFKEQCFAFVETSLPEIYYSINYDIS 108
Query: 488 AKEICVFLKLCRDQ 447
+K++CV + C ++
Sbjct: 109 SKDVCVRMNFCDER 122
>U40797-2|AAB37549.2| 429|Caenorhabditis elegans Saposin-like
protein family protein10, isoform b protein.
Length = 429
Score = 35.5 bits (78), Expect = 0.034
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Frame = -1
Query: 662 FAVEQXESVLKNNRSE--ENIRKALDGLCTRL-SQKLQSECIDFVDTYSSQLVEMLVADM 492
F VE ++ + NR + +++R D C ++ + + CIDF+D Y +++M V
Sbjct: 267 FVVEDMQTDMITNRKKLSDDVR---DFACYKIVTANMTDSCIDFLDLYLPTVIQMTVEQA 323
Query: 491 NAKEICVFLKLCRDQLHDPLK 429
+ +C+ K C PL+
Sbjct: 324 TPQGVCLANKCCPASSVAPLR 344
Score = 34.7 bits (76), Expect = 0.059
Identities = 34/128 (26%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Frame = -1
Query: 461 LCRDQLH-DPLKLTHSSIDKFHAK--PTLRGDRNNHRKKSLLPKHMLVSEFSDVETNEIL 291
+CR+ + D +L S +DKF K P L+ N H + L H+ ++ D IL
Sbjct: 68 MCRETSYADECRLFVSQLDKFIDKLQPFLK---NPHAVCTRL--HICSNKKID-SFRRIL 121
Query: 290 DDTVNGRRVSHKSQSNVCVLCEFVLKEIDDQIKDKHNDDEIKKAV-HGICKHMPKSVSAE 114
+ + + + + VC C+FV+KE+ ++DK + E + + +CK + +
Sbjct: 122 LEFAKRAQKTFDAPAIVCDECQFVVKELKTVVEDKKSQAEARDFLRENVCKSLGQ-YRGF 180
Query: 113 CDQFVEKY 90
CD V++Y
Sbjct: 181 CDLVVDEY 188
Score = 30.7 bits (66), Expect = 0.96
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = -1
Query: 251 QSNVCVLCEFVLKEIDDQIKDKHNDDEIKKAVHGICKHMPKSVSAECDQFVEK 93
+++ C CE V+K I + KD +E+K + +C+ S + EC FV +
Sbjct: 34 ENSSCEECENVIKRISEAAKDPKKIEELKIVLGMMCRE--TSYADECRLFVSQ 84
>U40797-3|AAB37550.2| 238|Caenorhabditis elegans Saposin-like
protein family protein10, isoform a protein.
Length = 238
Score = 34.7 bits (76), Expect = 0.059
Identities = 34/128 (26%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Frame = -1
Query: 461 LCRDQLH-DPLKLTHSSIDKFHAK--PTLRGDRNNHRKKSLLPKHMLVSEFSDVETNEIL 291
+CR+ + D +L S +DKF K P L+ N H + L H+ ++ D IL
Sbjct: 68 MCRETSYADECRLFVSQLDKFIDKLQPFLK---NPHAVCTRL--HICSNKKID-SFRRIL 121
Query: 290 DDTVNGRRVSHKSQSNVCVLCEFVLKEIDDQIKDKHNDDEIKKAV-HGICKHMPKSVSAE 114
+ + + + + VC C+FV+KE+ ++DK + E + + +CK + +
Sbjct: 122 LEFAKRAQKTFDAPAIVCDECQFVVKELKTVVEDKKSQAEARDFLRENVCKSLGQ-YRGF 180
Query: 113 CDQFVEKY 90
CD V++Y
Sbjct: 181 CDLVVDEY 188
Score = 30.7 bits (66), Expect = 0.96
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = -1
Query: 251 QSNVCVLCEFVLKEIDDQIKDKHNDDEIKKAVHGICKHMPKSVSAECDQFVEK 93
+++ C CE V+K I + KD +E+K + +C+ S + EC FV +
Sbjct: 34 ENSSCEECENVIKRISEAAKDPKKIEELKIVLGMMCRE--TSYADECRLFVSQ 84
>Z66566-2|CAA91485.1| 537|Caenorhabditis elegans Hypothetical
protein T25C12.1b protein.
Length = 537
Score = 31.9 bits (69), Expect = 0.42
Identities = 38/179 (21%), Positives = 67/179 (37%), Gaps = 4/179 (2%)
Frame = -1
Query: 644 ESVLKNNRSEE-NIRKALDGLCTRLSQKLQSECIDFVDTYSSQLVEMLVADMNAKEICVF 468
+ +++ + EE + + + LC +L++K T + L A++ K IC
Sbjct: 337 QQIIQGKKYEEMEVGECMIQLCKKLAEKRVFGPRLMSQTTVAGLNHSNYANLPIKGICYI 396
Query: 467 LKLCRDQLHDPLKLTHSSIDKFH---AKPTLRGDRNNHRKKSLLPKHMLVSEFSDVETNE 297
+CR L+D + DKF K R R H KK+ + +E E
Sbjct: 397 QHVCRKVLYDKFENEEDFWDKFREAMRKLAARCRRVRHAKKTKHNREEAQAEMLSKRYGE 456
Query: 296 ILDDTVNGRRVSHKSQSNVCVLCEFVLKEIDDQIKDKHNDDEIKKAVHGICKHMPKSVS 120
+ +NG + V + N D+IK + + H+PK+ S
Sbjct: 457 DMPFNLNGAGLIRPKVETVSPEANIL------------NSDQIKSQLESLFAHIPKTES 503
>Z66566-1|CAA91484.1| 515|Caenorhabditis elegans Hypothetical
protein T25C12.1a protein.
Length = 515
Score = 31.9 bits (69), Expect = 0.42
Identities = 38/179 (21%), Positives = 67/179 (37%), Gaps = 4/179 (2%)
Frame = -1
Query: 644 ESVLKNNRSEE-NIRKALDGLCTRLSQKLQSECIDFVDTYSSQLVEMLVADMNAKEICVF 468
+ +++ + EE + + + LC +L++K T + L A++ K IC
Sbjct: 315 QQIIQGKKYEEMEVGECMIQLCKKLAEKRVFGPRLMSQTTVAGLNHSNYANLPIKGICYI 374
Query: 467 LKLCRDQLHDPLKLTHSSIDKFH---AKPTLRGDRNNHRKKSLLPKHMLVSEFSDVETNE 297
+CR L+D + DKF K R R H KK+ + +E E
Sbjct: 375 QHVCRKVLYDKFENEEDFWDKFREAMRKLAARCRRVRHAKKTKHNREEAQAEMLSKRYGE 434
Query: 296 ILDDTVNGRRVSHKSQSNVCVLCEFVLKEIDDQIKDKHNDDEIKKAVHGICKHMPKSVS 120
+ +NG + V + N D+IK + + H+PK+ S
Sbjct: 435 DMPFNLNGAGLIRPKVETVSPEANIL------------NSDQIKSQLESLFAHIPKTES 481
>X60233-1|CAA42793.1| 537|Caenorhabditis elegans LIN-14A protein.
Length = 537
Score = 31.9 bits (69), Expect = 0.42
Identities = 38/179 (21%), Positives = 67/179 (37%), Gaps = 4/179 (2%)
Frame = -1
Query: 644 ESVLKNNRSEE-NIRKALDGLCTRLSQKLQSECIDFVDTYSSQLVEMLVADMNAKEICVF 468
+ +++ + EE + + + LC +L++K T + L A++ K IC
Sbjct: 337 QQIIQGKKYEEMEVGECMIQLCKKLAEKRVFGPRLMSQTTVAGLNHSNYANLPIKGICYI 396
Query: 467 LKLCRDQLHDPLKLTHSSIDKFH---AKPTLRGDRNNHRKKSLLPKHMLVSEFSDVETNE 297
+CR L+D + DKF K R R H KK+ + +E E
Sbjct: 397 QHVCRKVLYDKFENEEDFWDKFREAMRKLAARCRRVRHAKKTKHNREEAQAEMLSKRYGE 456
Query: 296 ILDDTVNGRRVSHKSQSNVCVLCEFVLKEIDDQIKDKHNDDEIKKAVHGICKHMPKSVS 120
+ +NG + V + N D+IK + + H+PK+ S
Sbjct: 457 DMPFNLNGAGLIRPKVETVSPEANIL------------NSDQIKSQLESLFAHIPKTES 503
>X60232-1|CAA42792.1| 515|Caenorhabditis elegans LIN-14B2 protein.
Length = 515
Score = 31.9 bits (69), Expect = 0.42
Identities = 38/179 (21%), Positives = 67/179 (37%), Gaps = 4/179 (2%)
Frame = -1
Query: 644 ESVLKNNRSEE-NIRKALDGLCTRLSQKLQSECIDFVDTYSSQLVEMLVADMNAKEICVF 468
+ +++ + EE + + + LC +L++K T + L A++ K IC
Sbjct: 315 QQIIQGKKYEEMEVGECMIQLCKKLAEKRVFGPRLMSQTTVAGLNHSNYANLPIKGICYI 374
Query: 467 LKLCRDQLHDPLKLTHSSIDKFH---AKPTLRGDRNNHRKKSLLPKHMLVSEFSDVETNE 297
+CR L+D + DKF K R R H KK+ + +E E
Sbjct: 375 QHVCRKVLYDKFENEEDFWDKFREAMRKLAARCRRVRHAKKTKHNREEAQAEMLSKRYGE 434
Query: 296 ILDDTVNGRRVSHKSQSNVCVLCEFVLKEIDDQIKDKHNDDEIKKAVHGICKHMPKSVS 120
+ +NG + V + N D+IK + + H+PK+ S
Sbjct: 435 DMPFNLNGAGLIRPKVETVSPEANIL------------NSDQIKSQLESLFAHIPKTES 481
>X60231-1|CAA42791.1| 539|Caenorhabditis elegans LIN-14B1 protein.
Length = 539
Score = 31.9 bits (69), Expect = 0.42
Identities = 38/179 (21%), Positives = 67/179 (37%), Gaps = 4/179 (2%)
Frame = -1
Query: 644 ESVLKNNRSEE-NIRKALDGLCTRLSQKLQSECIDFVDTYSSQLVEMLVADMNAKEICVF 468
+ +++ + EE + + + LC +L++K T + L A++ K IC
Sbjct: 339 QQIIQGKKYEEMEVGECMIQLCKKLAEKRVFGPRLMSQTTVAGLNHSNYANLPIKGICYI 398
Query: 467 LKLCRDQLHDPLKLTHSSIDKFH---AKPTLRGDRNNHRKKSLLPKHMLVSEFSDVETNE 297
+CR L+D + DKF K R R H KK+ + +E E
Sbjct: 399 QHVCRKVLYDKFENEEDFWDKFREAMRKLAARCRRVRHAKKTKHNREEAQAEMLSKRYGE 458
Query: 296 ILDDTVNGRRVSHKSQSNVCVLCEFVLKEIDDQIKDKHNDDEIKKAVHGICKHMPKSVS 120
+ +NG + V + N D+IK + + H+PK+ S
Sbjct: 459 DMPFNLNGAGLIRPKVETVSPEANIL------------NSDQIKSQLESLFAHIPKTES 505
>Z50742-4|CAA90617.1| 498|Caenorhabditis elegans Hypothetical
protein K09A11.4 protein.
Length = 498
Score = 30.3 bits (65), Expect = 1.3
Identities = 24/88 (27%), Positives = 38/88 (43%)
Frame = -1
Query: 371 NNHRKKSLLPKHMLVSEFSDVETNEILDDTVNGRRVSHKSQSNVCVLCEFVLKEIDDQIK 192
N H K + +LVS F + I+ G HK Q N+ +F+ +E+ QIK
Sbjct: 202 NKHLKIAQGKPQLLVSAFPWLRYVPII-----GELGYHKIQRNIQSYQKFIDEEVVSQIK 256
Query: 191 DKHNDDEIKKAVHGICKHMPKSVSAECD 108
+ E + VH + M +S + D
Sbjct: 257 QYDGESEPENFVHAYLQQMKQSGNPNLD 284
>AC024826-14|AAF60791.1| 332|Caenorhabditis elegans Mrna decapping
enzyme protein 1 protein.
Length = 332
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/71 (25%), Positives = 29/71 (40%)
Frame = -3
Query: 552 VHRLRGHVLESARRDAGGRHEREGDLRVPEAVSGPTARSPQADPLVHRQVPREADIERRQ 373
V+RL+G E AR + + P A++PQ P +V I+ Q
Sbjct: 130 VNRLKGSTTEQARAAKAASEAPQASVPAPTQAPAAPAQAPQMAPQAPPKVDLLQLIKSAQ 189
Query: 372 EQPQEEVASAQ 340
PQ+ A+ +
Sbjct: 190 NPPQKSAATIE 200
>U70852-14|AAM98014.1| 783|Caenorhabditis elegans Gei-4(four)
interacting proteinprotein 4, isoform a protein.
Length = 783
Score = 29.9 bits (64), Expect = 1.7
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Frame = -1
Query: 383 RGDRNN--HRKKSLLPKHMLVSEFSDVETNEILDDTVNGRRVSHKSQSNVCVLCEFVLKE 210
+G +NN H K +LL H + + + + R + + + L +FV
Sbjct: 239 QGRKNNLPHDKSNLL--HFAAAYSTREFLERVTLEKFYRREIERRLRKQPKFLNDFVASI 296
Query: 209 IDDQIKDKHNDDEIKKAVHGICKHMPKSVSAE 114
I DQI K D+ +K HG + +P V+AE
Sbjct: 297 IIDQIYLKDTIDQYQKDPHGNERLIPSEVAAE 328
>U70852-13|AAM98015.1| 788|Caenorhabditis elegans Gei-4(four)
interacting proteinprotein 4, isoform b protein.
Length = 788
Score = 29.9 bits (64), Expect = 1.7
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Frame = -1
Query: 383 RGDRNN--HRKKSLLPKHMLVSEFSDVETNEILDDTVNGRRVSHKSQSNVCVLCEFVLKE 210
+G +NN H K +LL H + + + + R + + + L +FV
Sbjct: 244 QGRKNNLPHDKSNLL--HFAAAYSTREFLERVTLEKFYRREIERRLRKQPKFLNDFVASI 301
Query: 209 IDDQIKDKHNDDEIKKAVHGICKHMPKSVSAE 114
I DQI K D+ +K HG + +P V+AE
Sbjct: 302 IIDQIYLKDTIDQYQKDPHGNERLIPSEVAAE 333
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 29.5 bits (63), Expect = 2.2
Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Frame = -1
Query: 455 RDQLHDPLKLTHSSIDKFHAKPTLRGDRNNHRKKSLLPKHML--VSEFSDVETNEILDDT 282
RD + + L L H ++ KF+ T +G HR + P+H L + +F + + D
Sbjct: 3083 RDAVVNTLCLVHKTVQKFNEMETKKG----HRVMACTPRHFLDFIKQFMSLFHEKRSD-- 3136
Query: 281 VNGRRVSHKSQSNVCVLCEFVLKEIDDQIKDKHNDDEIKK 162
+ ++ N E +KE+ +K K N+ + KK
Sbjct: 3137 LEEEKIHLNIGLNKISETEEQVKELQKSLKLKSNELQEKK 3176
>U40417-4|AAM69087.1| 100|Caenorhabditis elegans Saposin-like
protein family protein3 protein.
Length = 100
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = -1
Query: 614 ENIRKALDGLCTRLSQKLQ---SECIDFVDTYSSQLVEMLVADMNAKEICVFLKLC 456
E+I+KA+D C + + EC F+DT ++ L ++C L +C
Sbjct: 45 ESIKKAVDAECKKEFHSIPFGTQECKKFIDTKLDPIIHELENGTAPSDVCTKLGMC 100
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 29.5 bits (63), Expect = 2.2
Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Frame = -1
Query: 455 RDQLHDPLKLTHSSIDKFHAKPTLRGDRNNHRKKSLLPKHML--VSEFSDVETNEILDDT 282
RD + + L L H ++ KF+ T +G HR + P+H L + +F + + D
Sbjct: 3083 RDAVVNTLCLVHKTVQKFNEMETKKG----HRVMACTPRHFLDFIKQFMSLFHEKRSD-- 3136
Query: 281 VNGRRVSHKSQSNVCVLCEFVLKEIDDQIKDKHNDDEIKK 162
+ ++ N E +KE+ +K K N+ + KK
Sbjct: 3137 LEEEKIHLNIGLNKISETEEQVKELQKSLKLKSNELQEKK 3176
>U40800-8|ABB51192.1| 349|Caenorhabditis elegans Hypothetical
protein D2096.7b protein.
Length = 349
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = -1
Query: 299 EILDDTVNGRRVSHKSQSNVCVLCEFVLKEIDDQIKDKHNDDEIKKAVHGICKHMPKSVS 120
EIL N RR K++ +C F++ + + + HN E+ +++ +CK MP S
Sbjct: 26 EILIIIENERRYDVKTR--LCERIAFLIYQDSNFGRLPHNSSEVFASINRLCKSMPTGFS 83
Query: 119 AE 114
E
Sbjct: 84 FE 85
>U40800-7|AAA81493.2| 343|Caenorhabditis elegans Hypothetical
protein D2096.7a protein.
Length = 343
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = -1
Query: 299 EILDDTVNGRRVSHKSQSNVCVLCEFVLKEIDDQIKDKHNDDEIKKAVHGICKHMPKSVS 120
EIL N RR K++ +C F++ + + + HN E+ +++ +CK MP S
Sbjct: 26 EILIIIENERRYDVKTR--LCERIAFLIYQDSNFGRLPHNSSEVFASINRLCKSMPTGFS 83
Query: 119 AE 114
E
Sbjct: 84 FE 85
>AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical
protein W02D3.11b protein.
Length = 362
Score = 29.1 bits (62), Expect = 2.9
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 7/71 (9%)
Frame = -3
Query: 531 VLESARRDAGGRHEREGDLRVPEAVSGPTARSPQA------DPLVHRQVP-READIERRQ 373
V E+ RD R E DLRVP P A +PQ DP P R A RR
Sbjct: 195 VFEATHRDLS-RFAEENDLRVPRFGPPPFASAPQTAPRGAYDPYSQPTDPYRNATDYRRA 253
Query: 372 EQPQEEVASAQ 340
+P++ A ++
Sbjct: 254 AEPEDPYARSR 264
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 29.1 bits (62), Expect = 2.9
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 7/71 (9%)
Frame = -3
Query: 531 VLESARRDAGGRHEREGDLRVPEAVSGPTARSPQA------DPLVHRQVP-READIERRQ 373
V E+ RD R E DLRVP P A +PQ DP P R A RR
Sbjct: 195 VFEATHRDLS-RFAEENDLRVPRFGPPPFASAPQTAPRGAYDPYSQPTDPYRNATDYRRA 253
Query: 372 EQPQEEVASAQ 340
+P++ A ++
Sbjct: 254 AEPEDPYARSR 264
>Z50742-3|CAA90615.1| 492|Caenorhabditis elegans Hypothetical
protein K09A11.3 protein.
Length = 492
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = -1
Query: 260 HKSQSNVCVLCEFVLKEIDDQIKDKHNDDEIKKAVHGICKHMPKSVSAECD 108
H+ + N+ EF+ E+ QIK + E + VH + M +S + D
Sbjct: 234 HRIKKNIQSYQEFINDEVTSQIKHYDGESEPENFVHAYMQQMKQSGNPNLD 284
>Z66567-4|CAA91493.2| 618|Caenorhabditis elegans Hypothetical
protein ZK455.4 protein.
Length = 618
Score = 28.3 bits (60), Expect = 5.1
Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Frame = -1
Query: 662 FAVEQXESVLKNNRSEENIRKALDGLCTRLSQKLQSECIDFVDTYSSQLVEMLVADM-NA 486
FAV+ ++++ N ++ I L LC + C + + + ++V +L +
Sbjct: 77 FAVDGVQALIAQNSTDNEIAAFLVNLCDLFDVEQPHVCKNIIYAFKDEVVFVLERSVFTP 136
Query: 485 KEIC-VFLKLCRDQLHDPLKLTH 420
+EIC F+ C H LTH
Sbjct: 137 EEICGAFIANCG---HSDKPLTH 156
>U40417-6|AAA81415.2| 90|Caenorhabditis elegans Saposin-like
protein family protein6 protein.
Length = 90
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/60 (23%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = -1
Query: 626 NRSEENIRKALDGLCTRLSQKLQ---SECIDFVDTYSSQLVEMLVADMNAKEICVFLKLC 456
++ +I+K D C + +Q EC +VD +++ L + + K++C L C
Sbjct: 30 DKDTNDIKKDFDAKCKKAFHSIQFAPRECEHYVDKKLDPIIKELESGTSPKDVCTKLGEC 89
>Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical
protein C36B1.9 protein.
Length = 674
Score = 27.9 bits (59), Expect = 6.8
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = -3
Query: 444 ARSPQADPLVHRQVPREADIERRQEQPQEEVASAQTHAGF*IQ*RRNERDPGRHGERS 271
A +ADP H REA + R +E QE A+ + RNE H +R+
Sbjct: 308 AARAEADPRRHLNAVREAHLRRERESAQEREAAVRNEQLMRQLLDRNENMQNVHIDRN 365
>Z69637-3|CAA93468.1| 173|Caenorhabditis elegans Hypothetical
protein F35G2.3 protein.
Length = 173
Score = 27.9 bits (59), Expect = 6.8
Identities = 18/58 (31%), Positives = 33/58 (56%)
Frame = -1
Query: 323 EFSDVETNEILDDTVNGRRVSHKSQSNVCVLCEFVLKEIDDQIKDKHNDDEIKKAVHG 150
EF++ + NE++DD V R++ K ++ + L +F EI+ + ND +K A+ G
Sbjct: 102 EFAEEDANELVDDLVQARKII-KEKNEMIELLKF---EIEFNKTNFQND--LKSALQG 153
>Z29094-3|CAA82343.1| 358|Caenorhabditis elegans Hypothetical
protein C07A9.5 protein.
Length = 358
Score = 27.9 bits (59), Expect = 6.8
Identities = 19/78 (24%), Positives = 33/78 (42%)
Frame = -1
Query: 401 HAKPTLRGDRNNHRKKSLLPKHMLVSEFSDVETNEILDDTVNGRRVSHKSQSNVCVLCEF 222
H++PT+ G+R H K+L + + ++ I V+G H +C
Sbjct: 70 HSRPTVSGERFTHSFKTLASR---MERLDQTISDRI--RIVDGEISRHSDNEKICEQAAC 124
Query: 221 VLKEIDDQIKDKHNDDEI 168
LK D+ I D + E+
Sbjct: 125 TLKTCDNVIVDVKKELEM 142
>U00055-5|AAL06044.4| 1182|Caenorhabditis elegans Hypothetical
protein R02F2.2 protein.
Length = 1182
Score = 27.9 bits (59), Expect = 6.8
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = -1
Query: 452 DQLHDPLKLTHSSIDKFHAKPT-LRGDRNNHRKKSLLPKHMLVSE-FSDVETNEILDDTV 279
++L D K + S+ + A P+ DR +R+ + + L S FSDV+ + + DT+
Sbjct: 138 EELKDAAK-SIQSLQRVLAYPSQTSSDRGGNRRLADPVESCLESSVFSDVDESSLATDTI 196
Query: 278 NGRR 267
GRR
Sbjct: 197 EGRR 200
>U38937-1|AAA93079.1| 441|Caenorhabditis elegans LIN-1 protein.
Length = 441
Score = 27.5 bits (58), Expect = 9.0
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = -1
Query: 644 ESVLKNNRSEENIRKALDGLCTRLSQKLQSECIDFVDTYSSQLVEMLVADMN 489
E +L + E N+ D +CTR S S +D + T L+E+L D N
Sbjct: 31 EGILDIRKKEMNVS---DLMCTRSSTPPTSSSVDSIITLWQFLLELLQQDQN 79
>U38935-1|AAB60254.1| 441|Caenorhabditis elegans LIN-1 protein.
Length = 441
Score = 27.5 bits (58), Expect = 9.0
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = -1
Query: 644 ESVLKNNRSEENIRKALDGLCTRLSQKLQSECIDFVDTYSSQLVEMLVADMN 489
E +L + E N+ D +CTR S S +D + T L+E+L D N
Sbjct: 31 EGILDIRKKEMNVS---DLMCTRSSTPPTSSSVDSIITLWQFLLELLQQDQN 79
>AF067606-1|AAC17530.3| 441|Caenorhabditis elegans Abnormal cell
lineage protein 1 protein.
Length = 441
Score = 27.5 bits (58), Expect = 9.0
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = -1
Query: 644 ESVLKNNRSEENIRKALDGLCTRLSQKLQSECIDFVDTYSSQLVEMLVADMN 489
E +L + E N+ D +CTR S S +D + T L+E+L D N
Sbjct: 31 EGILDIRKKEMNVS---DLMCTRSSTPPTSSSVDSIITLWQFLLELLQQDQN 79
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,455,707
Number of Sequences: 27780
Number of extensions: 281145
Number of successful extensions: 1301
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1300
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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