Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_O07
(662 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g01800.1 68418.m00099 saposin B domain-containing protein con... 38 0.008
At1g62290.1 68414.m07027 aspartyl protease family protein contai... 32 0.39
At3g51730.1 68416.m05672 saposin B domain-containing protein con... 31 0.68
At1g11910.1 68414.m01374 aspartyl protease family protein contai... 30 1.2
At4g00800.1 68417.m00110 expressed protein contains 1 WD-40 repe... 30 1.6
At3g47850.1 68416.m05216 expressed protein 29 2.1
At5g42690.1 68418.m05200 expressed protein contains Pfam profile... 29 2.8
At5g62680.1 68418.m07866 proton-dependent oligopeptide transport... 29 3.6
At5g39500.1 68418.m04783 pattern formation protein, putative sim... 28 4.8
At2g20960.1 68415.m02479 expressed protein pEARLI 4 gene product... 28 4.8
At1g67640.1 68414.m07716 lysine and histidine specific transport... 28 4.8
At5g61380.1 68418.m07701 ABI3-interacting protein 1 (AIP1) ident... 28 6.4
At5g17660.1 68418.m02070 expressed protein contains Pfam profile... 28 6.4
At1g24400.1 68414.m03076 lysine and histidine specific transport... 28 6.4
At5g48310.1 68418.m05968 expressed protein 27 8.4
At5g01720.1 68418.m00090 F-box family protein (FBL3) contains si... 27 8.4
At3g47910.1 68416.m05224 expressed protein low similarity to non... 27 8.4
At1g23480.2 68414.m02946 glycosyl transferase family 2 protein s... 27 8.4
At1g23480.1 68414.m02945 glycosyl transferase family 2 protein s... 27 8.4
>At5g01800.1 68418.m00099 saposin B domain-containing protein
contains Pfam profiles: PF00026 eukaryotic aspartyl
protease, PF03489 surfactant protein B, PF05184
saposin-like type B, region 1
Length = 217
Score = 37.5 bits (83), Expect = 0.008
Identities = 21/83 (25%), Positives = 41/83 (49%)
Frame = -1
Query: 263 SHKSQSNVCVLCEFVLKEIDDQIKDKHNDDEIKKAVHGICKHMPKSVSAECDQFVEKYAD 84
S + VC LC+ + + D ++D N +E+ +A+H C +P + +C V+ Y
Sbjct: 31 SAHDDNQVCELCDKYVTLVIDYLQDYDNQNELVEALHISCSQIP-PLKKQCLSMVDHYTQ 89
Query: 83 LVSAXRATRIGPERRMRRIEMMQ 15
L +T I ++ +R+ + Q
Sbjct: 90 LFFTQVST-IKSDQICKRLNLCQ 111
>At1g62290.1 68414.m07027 aspartyl protease family protein contains
Pfam profiles: PF00026 eukaryotic aspartyl protease,
PF03489 surfactant protein B, PF05184 saposin-like type
B, region 1
Length = 513
Score = 31.9 bits (69), Expect = 0.39
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -1
Query: 563 LQSECIDFVDTYSSQLVEMLVADMNAKEICVFLKLCR-DQLHDPLKLTHSSIDK 405
+ +C VD Y ++++L+A+ K+IC + LC D H S +DK
Sbjct: 320 VSQQCKTVVDQYGQTILDLLLAETQPKKICSQIGLCAYDGTHGVSMGIESVVDK 373
>At3g51730.1 68416.m05672 saposin B domain-containing protein
contains Pfam profiles: PF00026 eukaryotic aspartyl
protease, PF03489 surfactant protein B, PF05184
saposin-like type B, region 1
Length = 213
Score = 31.1 bits (67), Expect = 0.68
Identities = 19/76 (25%), Positives = 36/76 (47%)
Frame = -1
Query: 308 ETNEILDDTVNGRRVSHKSQSNVCVLCEFVLKEIDDQIKDKHNDDEIKKAVHGICKHMPK 129
+ +D T++ +VS+K +VC LCE + + ++ EI + +H C + +
Sbjct: 20 DARSFVDSTIS-EKVSNKE--DVCTLCEEYVTDALSYLEKNVTQAEIIEDLHDRCSQL-R 75
Query: 128 SVSAECDQFVEKYADL 81
S +C V+ Y L
Sbjct: 76 GYSQQCISLVDYYVPL 91
>At1g11910.1 68414.m01374 aspartyl protease family protein contains
Pfam profiles: PF00026 eukaryotic aspartyl protease,
PF03489 surfactant protein B, PF05184 saposin-like type
B, region 1
Length = 506
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = -1
Query: 563 LQSECIDFVDTYSSQLVEMLVADMNAKEICVFLKLCR-DQLHDPLKLTHSSIDKFHAK 393
+ +C VD Y ++++L+++ K+IC + LC D S +DK +AK
Sbjct: 313 VSQQCKTVVDQYGQTILDLLLSETQPKKICSQIGLCTFDGTRGVSMGIESVVDKENAK 370
>At4g00800.1 68417.m00110 expressed protein contains 1 WD-40 repeat
(PF00400); 42% similarity to fimbriae-associated protein
Fap1 (gi:3929312) [Streptococcus parasanguinis]
Length = 994
Score = 29.9 bits (64), Expect = 1.6
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 7/89 (7%)
Frame = +3
Query: 393 LRVELVYGRVGQLEGIVQLVPTQL-QEHADLLRVHV------GHQHLDELTRVRVHEVDA 551
L V L Y VG +G++ +VP++ +HAD + + G + +T V +++ +
Sbjct: 432 LAVHLNYIAVGTSKGVIVVVPSKYSSDHADQMESKMIWLGLQGERSQSPVTSVCFNQIGS 491
Query: 552 LALQFLGEPRAETVQSLANVLLTTVVLEH 638
L L G+ TV + + V+ EH
Sbjct: 492 LLLAGYGDGHV-TVWDMQRASIAKVITEH 519
>At3g47850.1 68416.m05216 expressed protein
Length = 322
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/64 (25%), Positives = 31/64 (48%)
Frame = -3
Query: 525 ESARRDAGGRHEREGDLRVPEAVSGPTARSPQADPLVHRQVPREADIERRQEQPQEEVAS 346
E AR D G R R + + + V A + +VP E +++R++ + + +V +
Sbjct: 107 EGARSDGGDRPGRVTESKETDNVPHKYAAKEEETNEAAEKVPSETELKRKEVEERLQVLN 166
Query: 345 AQTH 334
A+ H
Sbjct: 167 AKKH 170
>At5g42690.1 68418.m05200 expressed protein contains Pfam profile
PF04784: Protein of unknown function, DUF547; expression
supported by MPSS
Length = 512
Score = 29.1 bits (62), Expect = 2.8
Identities = 22/88 (25%), Positives = 35/88 (39%)
Frame = -1
Query: 653 EQXESVLKNNRSEENIRKALDGLCTRLSQKLQSECIDFVDTYSSQLVEMLVADMNAKEIC 474
E E + K R EENI +A++ +R L + L E+ V + +
Sbjct: 30 EDVEKLRKKLRLEENIHRAMERAFSRPLGALPRLPPFLPPSVLELLAEVAVLEEELVRLE 89
Query: 473 VFLKLCRDQLHDPLKLTHSSIDKFHAKP 390
+ CR +L+ T SSI+ P
Sbjct: 90 EHIVHCRQELYQEAVFTSSSIENLKCSP 117
>At5g62680.1 68418.m07866 proton-dependent oligopeptide transport
(POT) family protein contains Pfam profile: PF00854 POT
family
Length = 616
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 343 GRSDFFLWLFLSPLNVGFAWNLSMDEWVSLRGS 441
GR D F ++ L V FA+ L M W +GS
Sbjct: 562 GRLDLFYFMIAGILAVNFAYFLVMSRWYRYKGS 594
>At5g39500.1 68418.m04783 pattern formation protein, putative
similar to SP|Q42510 Pattern formation protein EMB30
{Arabidopsis thaliana}; contains Pfam profile PF01369:
Sec7 domain
Length = 1443
Score = 28.3 bits (60), Expect = 4.8
Identities = 17/61 (27%), Positives = 33/61 (54%)
Frame = +3
Query: 240 DVALRLVRDAATVHRVVQDLVRFDVTEFRNQHVFGQKRLLPVVVPVASQCRLRVELVYGR 419
+ LR+V +++ ++Q + R + E + +F Q LP + P+A++C L V+ G
Sbjct: 189 NTCLRVVHQSSSKSELLQRIARHTMHELI-RCIFSQ---LPFISPLANECELHVDNKVGT 244
Query: 420 V 422
V
Sbjct: 245 V 245
>At2g20960.1 68415.m02479 expressed protein pEARLI 4 gene product
[Arabidopsis thaliana] GI:871782
Length = 748
Score = 28.3 bits (60), Expect = 4.8
Identities = 26/94 (27%), Positives = 37/94 (39%), Gaps = 16/94 (17%)
Frame = -3
Query: 570 PETAERVHRLRGHVLESARRDAGGRHER--------EGDLRVPEAVSG---PTARSPQAD 424
PET R + RG E R G R + E R P+ S P+ R PQ
Sbjct: 289 PETRPRTAQRRGRSPEFMERSPGPRSKTPEPQPTYFEPSSRTPKQRSKTPEPSPRIPQTQ 348
Query: 423 PLVHRQVPREA-----DIERRQEQPQEEVASAQT 337
P+ HR + A +E R P+ + + +T
Sbjct: 349 PMSHRSLDNAALKMPRTVETRPRTPEHQPRTVET 382
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 467 LKLCRDQLHDPLKLTHSSIDKFHAKPTLRG 378
L + R +LH S +DKF KP L+G
Sbjct: 717 LDMKRARLHKSFTFLSSKVDKFQGKPLLQG 746
>At1g67640.1 68414.m07716 lysine and histidine specific transporter,
putative similar to lysine and histidine specific
transporter GB:AAC49885 GI:2576361 (Arabidopsis
thaliana); contains Pfam profile PF01490: Transmembrane
amino acid transporter protein
Length = 441
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +3
Query: 303 RFDVTEFRNQHVFGQKRLLPVVVPVASQCRLRVELVY 413
RFD QH FG+K L +VVP + V++VY
Sbjct: 93 RFDRYHELGQHAFGEKLGLWIVVPQQLIVEVGVDIVY 129
>At5g61380.1 68418.m07701 ABI3-interacting protein 1 (AIP1)
identical to pseudo-response regulator 1 GI:7576354 from
[Arabidopsis thaliana]; timing of CAB expression 1
protein (TOC1) GI:9247019; contains Pfam profile
PF00072: Response regulator receiver domain; identical
to cDNA ABI3-interacting protein 1 (aip1 gene)
GI:6996312
Length = 618
Score = 27.9 bits (59), Expect = 6.4
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = -3
Query: 609 HSQGSGRSLHAALPETAERVHRLRGHVLESARRDAGGRHEREGDLRVPEAVSGPTARSPQ 430
HSQG A+ P + ER L ++ GR+ +EG++ +P+ + S Q
Sbjct: 379 HSQGETLQNGASYPHSLERSRTL------PTSMESHGRNYQEGNMNIPQVAMNRSKDSSQ 432
Query: 429 AD 424
D
Sbjct: 433 VD 434
>At5g17660.1 68418.m02070 expressed protein contains Pfam profile
PF02390: Putative methyltransferase
Length = 312
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = -1
Query: 557 SECIDFVDTYSSQLVEMLVADMN 489
S C+DF D S++LVE+ A++N
Sbjct: 60 SVCVDFKDLRSNELVELEYAELN 82
>At1g24400.1 68414.m03076 lysine and histidine specific transporter,
putative similar to lysine and histidine specific
transporter GI:2576361 from [Arabidopsis thaliana];
contains Pfam profile PF01490: Transmembrane amino acid
transporter protein
Length = 441
Score = 27.9 bits (59), Expect = 6.4
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +3
Query: 276 VHRVVQDLVRFDVTEFRNQHVFGQKRLLPVVVPVASQCRLRVELVYGRVG--QLEGIVQL 449
+H +V R D QH FG+K L +VVP + V++VY G L+ + QL
Sbjct: 85 MHEIVPGK-RLDRYHELGQHAFGEKLGLWIVVPQQLIVEVGVDIVYMVTGGASLKKVHQL 143
Query: 450 VPTQLQE 470
V +E
Sbjct: 144 VCPDCKE 150
>At5g48310.1 68418.m05968 expressed protein
Length = 1156
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -1
Query: 218 LKEIDDQIKDKHNDDEIKKAVHGICKHMPKSVSAECDQFVEK 93
LK I ++IKD + E+++ + +C + SVS D F +
Sbjct: 1026 LKRILEEIKDNEREVEVRERMKTLCLQITDSVSNLHDVFTSQ 1067
>At5g01720.1 68418.m00090 F-box family protein (FBL3) contains
similarity to leucine-rich repeats containing F-box
protein FBL3 GI:5919219 from [Homo sapiens]
Length = 665
Score = 27.5 bits (58), Expect = 8.4
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = -1
Query: 602 KALDGLCTRLSQKLQSECIDFVDTYSSQLVEMLVADMNAKEICVFLKLCR 453
KA+ LC L + S+C+ D S LV M + D+ +I KL R
Sbjct: 322 KAIGTLCNSLKEVSLSKCVSVTDEGLSSLV-MKLKDLRKLDITCCRKLSR 370
>At3g47910.1 68416.m05224 expressed protein low similarity to
nonmuscle myosin heavy chain (NMHC) [Homo sapiens]
GI:189036; contains Pfam profiles PF04780: Protein of
unknown function (DUF629), PF04781: Protein of unknown
function (DUF627)
Length = 1290
Score = 27.5 bits (58), Expect = 8.4
Identities = 17/67 (25%), Positives = 33/67 (49%)
Frame = -1
Query: 215 KEIDDQIKDKHNDDEIKKAVHGICKHMPKSVSAECDQFVEKYADLVSAXRATRIGPERRM 36
+ I+D+ K+KH ++ KK + ++ K+V C Y LV + I E+R
Sbjct: 1038 RRIEDEAKEKHMAEQQKKYSSSVPMNVAKTVYNGCTDNEVDY--LVLQGQEKSINQEKRN 1095
Query: 35 RRIEMMQ 15
R++ ++
Sbjct: 1096 GRLDDLE 1102
>At1g23480.2 68414.m02946 glycosyl transferase family 2 protein
similar to cellulose synthase from Agrobacterium
tumeficiens [gi:710492] and Agrobacterium radiobacter
[gi:710493]; contains Pfam glycosyl transferase, group 2
family protein domain PF00535 isoform contains GG
acceptor splice site at intron 1
Length = 484
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -1
Query: 125 VSAECDQFVEKYADLVSAXRATRIGPERRMRRIEMMQTRI 6
V+AECD++ K +++S R RIG + + MM +
Sbjct: 97 VNAECDKWARKGINIMSEIRDNRIGYKAGALKAGMMHNYV 136
>At1g23480.1 68414.m02945 glycosyl transferase family 2 protein
similar to cellulose synthase from Agrobacterium
tumeficiens [gi:710492] and Agrobacterium radiobacter
[gi:710493]; contains Pfam glycosyl transferase, group 2
family protein domain PF00535 isoform contains GG
acceptor splice site at intron 1
Length = 556
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -1
Query: 125 VSAECDQFVEKYADLVSAXRATRIGPERRMRRIEMMQTRI 6
V+AECD++ K +++S R RIG + + MM +
Sbjct: 169 VNAECDKWARKGINIMSEIRDNRIGYKAGALKAGMMHNYV 208
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,647,173
Number of Sequences: 28952
Number of extensions: 253276
Number of successful extensions: 1090
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1047
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1090
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1393347168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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