Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_O04
         (410 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IKK6 Cluster: Putative uncharacterized protein; n=2; ...    33   2.3  
UniRef50_Q7RGS1 Cluster: Yersinia pestis AMVITR01, putative; n=4...    32   5.2  
UniRef50_UPI0000DB6B65 Cluster: PREDICTED: similar to WD repeat ...    31   9.1  

>UniRef50_Q8IKK6 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 807

 Score = 33.1 bits (72), Expect = 2.3
 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
 Frame = +3

Query: 162 TFNYNNLLVPCSVTYILYEIINRACYKYTLKSVKFYRKKNIYRIYSYHYARTSCSIF*RA 341
           T N N + +PC    +   + N   +KY  K   F  +KN  + Y+     T  SIF   
Sbjct: 291 TLNMNEVALPCKKISVFNMLTNLKNFKYIKKYKYFLSQKNHLKSYNKKRNETLFSIFFYL 350

Query: 342 LWTL--NYLFTIT 374
            W +  N L+ I+
Sbjct: 351 HWDISKNVLYRIS 363


>UniRef50_Q7RGS1 Cluster: Yersinia pestis AMVITR01, putative; n=4;
           Plasmodium (Vinckeia)|Rep: Yersinia pestis AMVITR01,
           putative - Plasmodium yoelii yoelii
          Length = 440

 Score = 31.9 bits (69), Expect = 5.2
 Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = +3

Query: 150 ISIKTFNYNNLLVPCSVTYILY-EIINRACYKYTLKSVKFYRKKNIYRIYSYHY 308
           I  K  N  NLL+   + Y  + E I +A Y+Y L ++K +  ++IY+I S  Y
Sbjct: 376 IEDKNKNKINLLMEVLIHYKYFKEDILKAVYEYLLNNLKKFNNEDIYKILSXLY 429


>UniRef50_UPI0000DB6B65 Cluster: PREDICTED: similar to WD repeat
           domain 66; n=1; Apis mellifera|Rep: PREDICTED: similar
           to WD repeat domain 66 - Apis mellifera
          Length = 220

 Score = 31.1 bits (67), Expect = 9.1
 Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
 Frame = +3

Query: 132 ITKF*YISIKTFNYNNLLVPCSVTYILYEIINRACYKYTLKSVKFYRKKNIYRIYSYHYA 311
           IT+F    IK   +NN    CS  ++L    N   +K+  + +KFY  + + +I  Y   
Sbjct: 42  ITEFDTNRIKEIAFNN---DCSEEFVLIADYNVVFFKWEQEELKFYVPQILGKIRRYGIF 98

Query: 312 RTSCSI--F*RALWTLNYLFTITTQYSED 392
             SC I    R L    Y + +    S D
Sbjct: 99  NCSCFISKSLRVLTATTYGYVVVWDISAD 127


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 324,313,956
Number of Sequences: 1657284
Number of extensions: 5363384
Number of successful extensions: 11980
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11978
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 18619342852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)