Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_O04
         (410 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_1010 + 33477878-33478446,33478709-33478834,33478905-334791...    27   7.7  

>02_05_1010 +
           33477878-33478446,33478709-33478834,33478905-33479190,
           33479293-33479484,33479641-33479870,33480379-33480718,
           33481673-33481789,33481940-33482014
          Length = 644

 Score = 26.6 bits (56), Expect = 7.7
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 276 KNIYRIYSYHYARTSCSI 329
           + IY IYS+H + T CS+
Sbjct: 401 EEIYNIYSFHQSSTLCSV 418


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,817,306
Number of Sequences: 37544
Number of extensions: 115894
Number of successful extensions: 154
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 154
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 730630428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)