Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_O04
         (410 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    25   0.25 
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     21   7.2  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    20   9.5  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 25.4 bits (53), Expect = 0.25
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 265 FTEKKTFTESILIITPVQAVRYFNELY 345
           F++  TFTE    ITP++ V   N +Y
Sbjct: 427 FSDVVTFTEICSRITPMEVVSMLNAMY 453


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +2

Query: 20  ECKNKLLHDKQSVFI 64
           + KNKL+ + ++VFI
Sbjct: 192 DTKNKLIEESKTVFI 206


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 290 NLFLSLRPYKLFDILTSSMDL 352
           NLF    PY  F+I   + DL
Sbjct: 224 NLFYPYPPYGTFNIKGDTFDL 244


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,593
Number of Sequences: 438
Number of extensions: 1785
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10379628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)