Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_O01
         (523 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q22GV4 Cluster: Putative uncharacterized protein; n=1; ...    33   3.0  
UniRef50_UPI00006CBA20 Cluster: hypothetical repeat containing p...    33   5.2  
UniRef50_Q8II33 Cluster: Putative uncharacterized protein; n=1; ...    32   6.9  
UniRef50_UPI000038CA36 Cluster: hypothetical protein Npun0200164...    32   9.2  
UniRef50_Q4X3C7 Cluster: Putative uncharacterized protein; n=1; ...    32   9.2  

>UniRef50_Q22GV4 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 249

 Score = 33.5 bits (73), Expect = 3.0
 Identities = 13/46 (28%), Positives = 28/46 (60%)
 Frame = +1

Query: 172 YVTSDITILIFKSVYEVL*FHVNNISLNILHFTFEFISYYFCYNFI 309
           Y    +  +I + ++ ++ ++  +ISL + HF F+F++ YF  +FI
Sbjct: 167 YTPYQLVSIILRIIFWIIIYNKLSISLFLYHFLFDFMNIYFLKDFI 212


>UniRef50_UPI00006CBA20 Cluster: hypothetical repeat containing
           protein; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical repeat containing protein - Tetrahymena
           thermophila SB210
          Length = 2555

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 13/23 (56%), Positives = 18/23 (78%)
 Frame = +1

Query: 241 NISLNILHFTFEFISYYFCYNFI 309
           NI ++IL  TF+F +YYF YN+I
Sbjct: 931 NIEVDILQNTFQFNTYYFDYNYI 953


>UniRef50_Q8II33 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 1057

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
 Frame = +1

Query: 121  NN*NRKFSNNISIIQLFYVTSDITILIFKSVYEVL*FHV-NNISLNILHFTFEFISYYFC 297
            NN N   +NN +I    Y   D++ +IFK+++  L  ++ N+I++ IL       S ++ 
Sbjct: 822  NNNNNNNNNNNNISNNMYDKFDLSFIIFKNIFFFLKIYIDNDINIYILINHVIIPSLFYL 881

Query: 298  Y-NFIR 312
            Y NF++
Sbjct: 882  YMNFLK 887


>UniRef50_UPI000038CA36 Cluster: hypothetical protein Npun02001640;
           n=1; Nostoc punctiforme PCC 73102|Rep: hypothetical
           protein Npun02001640 - Nostoc punctiforme PCC 73102
          Length = 294

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 14/37 (37%), Positives = 24/37 (64%)
 Frame = +1

Query: 184 DITILIFKSVYEVL*FHVNNISLNILHFTFEFISYYF 294
           D T++ F+  +E + +H N+IS  +LH   +FI YY+
Sbjct: 241 DETLIYFQQ-HEAIEYHKNSISQKLLHKLNKFIGYYY 276


>UniRef50_Q4X3C7 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 88

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 16/47 (34%), Positives = 27/47 (57%)
 Frame = +1

Query: 157 IIQLFYVTSDITILIFKSVYEVL*FHVNNISLNILHFTFEFISYYFC 297
           II + ++  DI I++ K+      F+  + + N L F+F +IS YFC
Sbjct: 11  IIIITFIRRDIIIIVMKTKISFR-FYKIHFTNNTLSFSFYYISIYFC 56


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 361,041,678
Number of Sequences: 1657284
Number of extensions: 5045305
Number of successful extensions: 8389
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8383
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)