Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_O01
         (523 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.6  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   2.9  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   6.6  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   6.6  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   6.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 6/43 (13%)
 Frame = -3

Query: 431 VMCNSRLDFXCASPFYMLR*SFVLTNSYFCL------CFFFFY 321
           ++    L F CA  F+ +   F+L   YF L      C ++FY
Sbjct: 174 IIFTMHLLFCCAFIFFNMHLLFLLCLDYFTLHLLFLPCIYYFY 216



 Score = 22.6 bits (46), Expect = 2.2
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = -3

Query: 368 FVLTNSYFCLCFFFFYVIHLMKL 300
           F++   +F LC ++FY   ++ L
Sbjct: 89  FIIFTVHFLLCTYYFYYAFIILL 111



 Score = 22.6 bits (46), Expect = 2.2
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = -3

Query: 389 FYMLR*SFVLTNSYFCLCFFFFYVIHLMKL 300
           +Y +   F L   Y+  C F  + +HL+ L
Sbjct: 134 YYFVVPLFFLLCIYYFYCAFIIFTVHLLFL 163



 Score = 21.8 bits (44), Expect = 3.8
 Identities = 8/24 (33%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = -3

Query: 371 SFVLTNSYFCL--CFFFFYVIHLM 306
           +F+L   +  L  C ++FY +HL+
Sbjct: 244 AFILFTVHLLLLVCIYYFYYMHLL 267


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +1

Query: 205 KSVYEVL*FHVNNISLNILHFTFEFISY 288
           KSV++ L  H      N +HF ++ + Y
Sbjct: 141 KSVFDFLCRHTVEYFQNYIHFFYQLLLY 168


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 487 ITYIFFMYDIYTVLG 443
           I Y  F  ++YTVLG
Sbjct: 120 ICYYHFTLELYTVLG 134


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 487 ITYIFFMYDIYTVLG 443
           I Y  F  ++YTVLG
Sbjct: 120 ICYYHFTLELYTVLG 134


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory
          receptor candidate 23 protein.
          Length = 291

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 5/12 (41%), Positives = 10/12 (83%)
 Frame = -1

Query: 88 YFLNICCMXRNV 53
          Y+LN+CC+  ++
Sbjct: 56 YWLNVCCLNLSI 67


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,061
Number of Sequences: 336
Number of extensions: 1639
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)