Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_N24
         (402 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    20   7.9  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    20   7.9  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    20   7.9  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    20   7.9  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 7.9
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +2

Query: 2   HWMGLYMSQIQYY 40
           HW G++    QYY
Sbjct: 200 HWHGVWQRGSQYY 212


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.2 bits (40), Expect = 7.9
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +2

Query: 2   HWMGLYMSQIQYY 40
           HW G++    QYY
Sbjct: 200 HWHGVWQRGSQYY 212


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 20.2 bits (40), Expect = 7.9
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 387 GRYGNMIKFKSTKWSFTFNRTNY 319
           GR G + + KS  + F+F  T+Y
Sbjct: 43  GRKGELKQHKSDYFYFSFYITSY 65


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 20.2 bits (40), Expect = 7.9
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 387 GRYGNMIKFKSTKWSFTFNRTNY 319
           GR G + + KS  + F+F  T+Y
Sbjct: 43  GRKGELKQHKSDYFYFSFYITSY 65


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,309
Number of Sequences: 336
Number of extensions: 675
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8646818
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)