Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_N21
         (850 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    25   0.76 
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    25   1.00 
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    23   3.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   4.0  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    23   4.0  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   7.0  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 25.0 bits (52), Expect = 0.76
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -1

Query: 715 PGPYEMVKNTGHVCSVVLEKIFLNNVDRMLDQG 617
           PG  +   N G+V    L+   L+  DRMLD G
Sbjct: 293 PGRLKDFVNRGNVSFNSLKYFVLDEADRMLDMG 325


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 24.6 bits (51), Expect = 1.00
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = +3

Query: 423 IICCSLDQYTLWEICCAATHFIPWAAPPSTQ*KDSTS--GTCPKKPG 557
           I+  +++ Y++ E   + T    WA PPST   D +    T P KPG
Sbjct: 389 ILYANMNSYSVPEPTISTTPRPEWARPPSTPSADGSKPVQTTP-KPG 434


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 457 GRFVVRPHTLYPGLHHQALNRK 522
           G+ + +P T+Y  L  Q LNR+
Sbjct: 118 GKKMRKPRTIYSSLQLQQLNRR 139


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = +1

Query: 601 LFKNGHLGPTFCPRYSKKFSPAPHYKRVLCFLPSRRV 711
           LFK      T C   S       H KR+LC+L +R V
Sbjct: 106 LFKRLIHFDTKCQENSTVIDYKRHKKRLLCYLLARYV 142


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = +1

Query: 601 LFKNGHLGPTFCPRYSKKFSPAPHYKRVLCFLPSRRV 711
           LFK      T C   S       H KR+LC+L +R V
Sbjct: 124 LFKRLIHFDTKCQENSTVIDYKRHKKRLLCYLLARYV 160


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +3

Query: 60  NXCFNQLSQXSSIRSVNDQPSKN 128
           N CF   +    I++ ND P  N
Sbjct: 402 NVCFRPRNNSILIKNFNDSPESN 424


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,843
Number of Sequences: 336
Number of extensions: 5291
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23451794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)