Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_N21
         (850 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    27   0.72 
AY330176-1|AAQ16282.1|  179|Anopheles gambiae odorant-binding pr...    25   2.9  
AJ618926-1|CAF02005.1|  315|Anopheles gambiae odorant-binding pr...    25   2.9  
CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    25   3.8  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   6.7  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   8.9  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   8.9  
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    23   8.9  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   8.9  

>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 27.1 bits (57), Expect = 0.72
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 618 PWSNILSTLFKKIFSSTTLQTCPV 689
           PW    +TL  K+ SS  ++ CPV
Sbjct: 344 PWGLAFNTLMNKVKSSEPVEQCPV 367


>AY330176-1|AAQ16282.1|  179|Anopheles gambiae odorant-binding
           protein AgamOBP49 protein.
          Length = 179

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = +3

Query: 375 SGCPAFQL--HVCLYM*RIICCSLDQYTLWEIC 467
           S C AF L  HVC+    +  C  D++T  EIC
Sbjct: 136 SKCNAFALLFHVCVTQITLKHCPDDRWTASEIC 168


>AJ618926-1|CAF02005.1|  315|Anopheles gambiae odorant-binding
           protein OBPjj6b protein.
          Length = 315

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = +3

Query: 375 SGCPAFQL--HVCLYM*RIICCSLDQYTLWEIC 467
           S C AF L  HVC+    +  C  D++T  EIC
Sbjct: 136 SKCNAFALLFHVCVTQITLKHCPDDRWTASEIC 168


>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = +3

Query: 135 RCSKAAFILFLAK 173
           RCS AAF LFLA+
Sbjct: 414 RCSTAAFFLFLAR 426


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 453 LWEICCAATHFIPWAAPPS 509
           LWEIC   TH  P +  P+
Sbjct: 164 LWEICARLTHQAPSSDRPA 182


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 631 FCPRYSKKFSPAPHYKR 681
           +C RYS + S  P Y+R
Sbjct: 470 YCTRYSDRPSSGPRYRR 486


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 631 FCPRYSKKFSPAPHYKR 681
           +C RYS + S  P Y+R
Sbjct: 470 YCTRYSDRPSSGPRYRR 486


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -2

Query: 567 WSFILAFLDKCLRWNLSIECL 505
           W F+   LD+   W  +I C+
Sbjct: 454 WKFVSMVLDRFFLWVFTISCI 474


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
 Frame = +1

Query: 568 HCAEEVLDYFHLFKNGHLG--PTFCPRYSKKFSPAPHYKRV 684
           HC E  L YF+L      G  P FC  ++ + + A  Y  V
Sbjct: 475 HCRECRLGYFNLDAENKFGCTPCFCYGHTLECTSASGYSIV 515


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 968,203
Number of Sequences: 2352
Number of extensions: 22181
Number of successful extensions: 57
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 57
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90132318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)