Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_N21
         (850 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC065027-1|AAH65027.1|  563|Homo sapiens methylcrotonoyl-Coenzym...    31   7.0  
AF310971-1|AAG53094.1|  563|Homo sapiens 3-methylcrotonyl-CoA ca...    31   7.0  
AF301000-1|AAK16404.1|  563|Homo sapiens 3-methylcrotonyl-CoA ca...    31   7.0  
AF261884-1|AAK49409.1|  563|Homo sapiens 3-methylcrotonyl-CoA ca...    31   7.0  
AB050050-1|BAB41121.1|  563|Homo sapiens non-biotin containing s...    31   7.0  
AB050049-1|BAB16880.1|  563|Homo sapiens non-biotin containing s...    31   7.0  
AK130344-1|BAC85331.1|  139|Homo sapiens protein ( Homo sapiens ...    30   9.2  

>BC065027-1|AAH65027.1|  563|Homo sapiens methylcrotonoyl-Coenzyme A
           carboxylase 2 (beta) protein.
          Length = 563

 Score = 30.7 bits (66), Expect = 7.0
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = -2

Query: 495 PRV*SVWPHNKSPTRCTGQGCNRLSSTYKDRRAAGKQDNHSAKSVAMKECVSVEF 331
           PR   +WP+ +       Q  N L++  KD+RA   +   SA   A+KE +  +F
Sbjct: 459 PRFLYIWPNARISVMGGEQAANVLATITKDQRAREGKQFSSADEAALKEPIIKKF 513


>AF310971-1|AAG53094.1|  563|Homo sapiens 3-methylcrotonyl-CoA
           carboxylase beta subunit protein.
          Length = 563

 Score = 30.7 bits (66), Expect = 7.0
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = -2

Query: 495 PRV*SVWPHNKSPTRCTGQGCNRLSSTYKDRRAAGKQDNHSAKSVAMKECVSVEF 331
           PR   +WP+ +       Q  N L++  KD+RA   +   SA   A+KE +  +F
Sbjct: 459 PRFLYIWPNARISVMGGEQAANVLATITKDQRAREGKQFSSADEAALKEPIIKKF 513


>AF301000-1|AAK16404.1|  563|Homo sapiens 3-methylcrotonyl-CoA
           carboxylase beta subunit protein.
          Length = 563

 Score = 30.7 bits (66), Expect = 7.0
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = -2

Query: 495 PRV*SVWPHNKSPTRCTGQGCNRLSSTYKDRRAAGKQDNHSAKSVAMKECVSVEF 331
           PR   +WP+ +       Q  N L++  KD+RA   +   SA   A+KE +  +F
Sbjct: 459 PRFLYIWPNARISVMGGEQAANVLATITKDQRAREGKQFSSADEAALKEPIIKKF 513


>AF261884-1|AAK49409.1|  563|Homo sapiens 3-methylcrotonyl-CoA
           carboxylase subunit MCCB protein.
          Length = 563

 Score = 30.7 bits (66), Expect = 7.0
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = -2

Query: 495 PRV*SVWPHNKSPTRCTGQGCNRLSSTYKDRRAAGKQDNHSAKSVAMKECVSVEF 331
           PR   +WP+ +       Q  N L++  KD+RA   +   SA   A+KE +  +F
Sbjct: 459 PRFLYIWPNARISVMGGEQAANVLATITKDQRAREGKQFSSADEAALKEPIIKKF 513


>AB050050-1|BAB41121.1|  563|Homo sapiens non-biotin containing
           subunit of 3-methylcrotonyl CoA carboxylase protein.
          Length = 563

 Score = 30.7 bits (66), Expect = 7.0
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = -2

Query: 495 PRV*SVWPHNKSPTRCTGQGCNRLSSTYKDRRAAGKQDNHSAKSVAMKECVSVEF 331
           PR   +WP+ +       Q  N L++  KD+RA   +   SA   A+KE +  +F
Sbjct: 459 PRFLYIWPNARISVMGGEQAANVLATITKDQRAREGKQFSSADEAALKEPIIKKF 513


>AB050049-1|BAB16880.1|  563|Homo sapiens non-biotin containing
           subunit of 3-methylcrotonyl-CoA carboxylase protein.
          Length = 563

 Score = 30.7 bits (66), Expect = 7.0
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = -2

Query: 495 PRV*SVWPHNKSPTRCTGQGCNRLSSTYKDRRAAGKQDNHSAKSVAMKECVSVEF 331
           PR   +WP+ +       Q  N L++  KD+RA   +   SA   A+KE +  +F
Sbjct: 459 PRFLYIWPNARISVMGGEQAANVLATITKDQRAREGKQFSSADEAALKEPIIKKF 513


>AK130344-1|BAC85331.1|  139|Homo sapiens protein ( Homo sapiens
           cDNA FLJ26834 fis, clone PRS07227. ).
          Length = 139

 Score = 30.3 bits (65), Expect = 9.2
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = -2

Query: 582 LFCTVWSFILAFLDKCLRWNLSI 514
           +F T +SF L FL  CLRW+L++
Sbjct: 61  VFITCFSFYLLFLFVCLRWSLTL 83


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,403,913
Number of Sequences: 237096
Number of extensions: 3133805
Number of successful extensions: 5259
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5259
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10761200974
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)