Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_N16
         (622 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    23   1.6  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    23   1.6  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   6.3  

>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = +3

Query: 282 IRILQELMVNESDPYTQKPTKARL*QISNEFLLDTCVKTISLY 410
           I+IL E+      P TQK T + L  +    L  TC+   SLY
Sbjct: 10  IKILAEIF--GLSPMTQKLTLSPLKVLQTVILGTTCIYLTSLY 50


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = +3

Query: 282 IRILQELMVNESDPYTQKPTKARL*QISNEFLLDTCVKTISLY 410
           I+IL E+      P TQK T + L  +    L  TC+   SLY
Sbjct: 10  IKILAEIF--GLSPMTQKLTLSPLKVLQTVILGTTCIYLTSLY 50


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 464 TLELSYVPPSHLCTKHSIRY 523
           +L L Y PP  + T H  RY
Sbjct: 157 SLPLHYPPPPPVYTHHYARY 176


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,407
Number of Sequences: 336
Number of extensions: 2963
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)