Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_N16
         (622 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    25   2.6  
L76433-1|AAC27659.1|  392|Anopheles gambiae tryptophan oxygenase...    23   7.8  
L76432-1|AAC27663.1|  392|Anopheles gambiae tryptophan oxygenase...    23   7.8  

>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 151 QHLKWPEAKHSAYQYQHPGVLSHRR 225
           +HL   +A H  +Q Q+P  + HRR
Sbjct: 617 RHLPQQQAIHHIHQQQYPRQVIHRR 641


>L76433-1|AAC27659.1|  392|Anopheles gambiae tryptophan oxygenase
           protein.
          Length = 392

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +3

Query: 51  DGLQFYCKFQTQLKKILSE 107
           DG  F+ KFQ  ++++L+E
Sbjct: 203 DGFNFWGKFQESVEQLLAE 221


>L76432-1|AAC27663.1|  392|Anopheles gambiae tryptophan oxygenase
           protein.
          Length = 392

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +3

Query: 51  DGLQFYCKFQTQLKKILSE 107
           DG  F+ KFQ  ++++L+E
Sbjct: 203 DGFNFWGKFQESVEQLLAE 221


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 620,567
Number of Sequences: 2352
Number of extensions: 12321
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60214320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)