Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_N16
         (622 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003803-1|AAO41486.1|  499|Drosophila melanogaster AT23158p pro...    28   8.9  
AY128464-1|AAM75057.1|  659|Drosophila melanogaster RE19005p pro...    28   8.9  
AE014296-1985|AAN11877.1|  489|Drosophila melanogaster CG6091-PB...    28   8.9  
AE014296-1984|AAN11876.1|  649|Drosophila melanogaster CG6091-PC...    28   8.9  
AE014296-1983|AAF50041.1|  649|Drosophila melanogaster CG6091-PA...    28   8.9  

>BT003803-1|AAO41486.1|  499|Drosophila melanogaster AT23158p
           protein.
          Length = 499

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
 Frame = +3

Query: 72  KFQTQLKKILSESPQAYYHPILGIPL--TASQVARGQTFSIPVPTSRCSKSQEVQL*PQK 245
           + +T+   + S+S +A   P+   P   +A  VAR  T   P    R S S++    PQK
Sbjct: 385 RHETRETTLASKSAEALEAPLRKSPKRDSAPSVARADT---PEAEQRPSTSKQSSHSPQK 441

Query: 246 HSLSRSSLSKVYIRILQELM 305
           +  S+S   + Y    QEL+
Sbjct: 442 NVDSKSPTEQSYSSFYQELL 461


>AY128464-1|AAM75057.1|  659|Drosophila melanogaster RE19005p
           protein.
          Length = 659

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
 Frame = +3

Query: 72  KFQTQLKKILSESPQAYYHPILGIPL--TASQVARGQTFSIPVPTSRCSKSQEVQL*PQK 245
           + +T+   + S+S +A   P+   P   +A  VAR  T   P    R S S++    PQK
Sbjct: 545 RHETRETTLASKSAEALEAPLRKSPKRDSAPSVARADT---PEAEQRPSTSKQSSHSPQK 601

Query: 246 HSLSRSSLSKVYIRILQELM 305
           +  S+S   + Y    QEL+
Sbjct: 602 NVDSKSPTEQSYSSFYQELL 621


>AE014296-1985|AAN11877.1|  489|Drosophila melanogaster CG6091-PB,
           isoform B protein.
          Length = 489

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
 Frame = +3

Query: 72  KFQTQLKKILSESPQAYYHPILGIPL--TASQVARGQTFSIPVPTSRCSKSQEVQL*PQK 245
           + +T+   + S+S +A   P+   P   +A  VAR  T   P    R S S++    PQK
Sbjct: 375 RHETRETTLASKSAEALEAPLRKSPKRDSAPSVARADT---PEAEQRPSTSKQSSHSPQK 431

Query: 246 HSLSRSSLSKVYIRILQELM 305
           +  S+S   + Y    QEL+
Sbjct: 432 NVDSKSPTEQSYSSFYQELL 451


>AE014296-1984|AAN11876.1|  649|Drosophila melanogaster CG6091-PC,
           isoform C protein.
          Length = 649

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
 Frame = +3

Query: 72  KFQTQLKKILSESPQAYYHPILGIPL--TASQVARGQTFSIPVPTSRCSKSQEVQL*PQK 245
           + +T+   + S+S +A   P+   P   +A  VAR  T   P    R S S++    PQK
Sbjct: 535 RHETRETTLASKSAEALEAPLRKSPKRDSAPSVARADT---PEAEQRPSTSKQSSHSPQK 591

Query: 246 HSLSRSSLSKVYIRILQELM 305
           +  S+S   + Y    QEL+
Sbjct: 592 NVDSKSPTEQSYSSFYQELL 611


>AE014296-1983|AAF50041.1|  649|Drosophila melanogaster CG6091-PA,
           isoform A protein.
          Length = 649

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
 Frame = +3

Query: 72  KFQTQLKKILSESPQAYYHPILGIPL--TASQVARGQTFSIPVPTSRCSKSQEVQL*PQK 245
           + +T+   + S+S +A   P+   P   +A  VAR  T   P    R S S++    PQK
Sbjct: 535 RHETRETTLASKSAEALEAPLRKSPKRDSAPSVARADT---PEAEQRPSTSKQSSHSPQK 591

Query: 246 HSLSRSSLSKVYIRILQELM 305
           +  S+S   + Y    QEL+
Sbjct: 592 NVDSKSPTEQSYSSFYQELL 611


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,046,550
Number of Sequences: 53049
Number of extensions: 514833
Number of successful extensions: 910
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 910
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)