Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_N16
         (622 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41544-1|AAA83183.2| 2275|Caenorhabditis elegans Hypothetical pr...    29   2.7  
AL032646-9|CAA21684.1|  305|Caenorhabditis elegans Hypothetical ...    27   8.2  
AC024796-7|AAN60505.2|  414|Caenorhabditis elegans Hypothetical ...    27   8.2  

>U41544-1|AAA83183.2| 2275|Caenorhabditis elegans Hypothetical protein
            M03A8.2 protein.
          Length = 2275

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +3

Query: 81   TQLKKILSESPQAYYHPILGIPLTASQVARGQTF 182
            T L+KI S        PI+  PLTAS V+ G+ F
Sbjct: 1713 TYLEKISSNHQSPVKRPIIDAPLTASAVSIGKIF 1746


>AL032646-9|CAA21684.1|  305|Caenorhabditis elegans Hypothetical
           protein Y54E2A.10 protein.
          Length = 305

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 19/59 (32%), Positives = 27/59 (45%)
 Frame = +3

Query: 27  VFYIYIYSDGLQFYCKFQTQLKKILSESPQAYYHPILGIPLTASQVARGQTFSIPVPTS 203
           + Y  + S   Q +C        I S  P+    P+L IPL  +Q    + FSIP+ TS
Sbjct: 128 ILYAQLLSLRWQEHCDADVIFVYIQSWQPERLRTPLL-IPLFGNQWPHLRRFSIPIVTS 185


>AC024796-7|AAN60505.2|  414|Caenorhabditis elegans Hypothetical
           protein Y48G1C.11 protein.
          Length = 414

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 18/63 (28%), Positives = 23/63 (36%)
 Frame = +3

Query: 9   PKLWAIVFYIYIYSDGLQFYCKFQTQLKKILSESPQAYYHPILGIPLTASQVARGQTFSI 188
           PK   + +  Y + D L      +T    IL  SP   Y P    P+  S   R     I
Sbjct: 320 PKEQIVGYSKYAFDDSLSPRPHSRTVETPILKNSPSPSYTPFHPTPVHRSNTVRADNRPI 379

Query: 189 PVP 197
           P P
Sbjct: 380 PPP 382


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,672,335
Number of Sequences: 27780
Number of extensions: 272698
Number of successful extensions: 518
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 518
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)