Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_N16
         (622 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    26   0.26 
DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex det...    21   7.3  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   9.7  

>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = +3

Query: 24  IVFYIYIYSDGLQFYCKFQTQLKKILSESPQAYY 125
           I ++I++Y + L  + +F  +L K+L ESP+  Y
Sbjct: 19  INYFIFLYFNSLVRFRRFTIELDKVL-ESPRGKY 51


>DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 13/36 (36%), Positives = 16/36 (44%)
 Frame = +2

Query: 338 DKSKALTDKQRIPLRHLCKNYFII*VNYN*DLYVNK 445
           DK +    K+R  +  L  NY     NYN D   NK
Sbjct: 69  DKRERERSKERKIISSLSNNYISNISNYNNDNNYNK 104


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = +2

Query: 38  LHIF*WTPILL*VSNSAQKNTF*VTSSLLSSNTRNPINSISSGQR 172
           LH+   +P     S+ AQ +    T+SLLSS       S+  G R
Sbjct: 671 LHLHLTSPPARSPSSQAQASQCPQTASLLSSTHSTLARSLMEGPR 715


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,276
Number of Sequences: 438
Number of extensions: 3503
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18460203
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)