Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_N14
(802 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 352 1e-97
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 352 1e-97
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 352 1e-97
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 352 1e-97
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 352 1e-97
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 352 1e-97
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 253 1e-67
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 253 1e-67
U13875-9|AAA21160.3| 403|Caenorhabditis elegans Hypothetical pr... 29 5.1
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 352 bits (866), Expect = 1e-97
Identities = 167/249 (67%), Positives = 198/249 (79%)
Frame = -3
Query: 794 RYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQD 615
+YCS +RVIAHTQMK+L++RQKKAH++EIQ+NGGTIE KV WAREHLEK + VD+VFAQD
Sbjct: 155 KYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQD 214
Query: 614 EMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGY 435
EMID I TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARAGQKG+
Sbjct: 215 EMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGF 274
Query: 434 HHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIK 255
HHRT +N KIYRIG+ ++G KNN STE+DL++K+ITPMGGFP YG VN D++M++
Sbjct: 275 HHRTIINNKIYRIGKSALTEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLR 331
Query: 254 GCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPAXQGCITWGHYK 75
G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A + G K
Sbjct: 332 GAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAF-MGKLK 390
Query: 74 KEXMREEAA 48
++ + E A
Sbjct: 391 RDFLAEAEA 399
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 352 bits (866), Expect = 1e-97
Identities = 167/249 (67%), Positives = 198/249 (79%)
Frame = -3
Query: 794 RYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQD 615
+YCS +RVIAHTQMK+L++RQKKAH++EIQ+NGGTIE KV WAREHLEK + VD+VFAQD
Sbjct: 155 KYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQD 214
Query: 614 EMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGY 435
EMID I TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARAGQKG+
Sbjct: 215 EMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGF 274
Query: 434 HHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIK 255
HHRT +N KIYRIG+ ++G KNN STE+DL++K+ITPMGGFP YG VN D++M++
Sbjct: 275 HHRTIINNKIYRIGKSALTEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLR 331
Query: 254 GCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPAXQGCITWGHYK 75
G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A + G K
Sbjct: 332 GAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAF-MGKLK 390
Query: 74 KEXMREEAA 48
++ + E A
Sbjct: 391 RDFLAEAEA 399
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 352 bits (866), Expect = 1e-97
Identities = 167/249 (67%), Positives = 198/249 (79%)
Frame = -3
Query: 794 RYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQD 615
+YCS +RVIAHTQMK+L++RQKKAH++EIQ+NGGTIE KV WAREHLEK + VD+VFAQD
Sbjct: 57 KYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQD 116
Query: 614 EMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGY 435
EMID I TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARAGQKG+
Sbjct: 117 EMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGF 176
Query: 434 HHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIK 255
HHRT +N KIYRIG+ ++G KNN STE+DL++K+ITPMGGFP YG VN D++M++
Sbjct: 177 HHRTIINNKIYRIGKSALTEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLR 233
Query: 254 GCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPAXQGCITWGHYK 75
G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A + G K
Sbjct: 234 GAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAF-MGKLK 292
Query: 74 KEXMREEAA 48
++ + E A
Sbjct: 293 RDFLAEAEA 301
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 352 bits (866), Expect = 1e-97
Identities = 167/249 (67%), Positives = 198/249 (79%)
Frame = -3
Query: 794 RYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQD 615
+YCS +RVIAHTQMK+L++RQKKAH++EIQ+NGGTIE KV WAREHLEK + VD+VFAQD
Sbjct: 155 KYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQD 214
Query: 614 EMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGY 435
EMID I TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARAGQKG+
Sbjct: 215 EMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGF 274
Query: 434 HHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIK 255
HHRT +N KIYRIG+ ++G KNN STE+DL++K+ITPMGGFP YG VN D++M++
Sbjct: 275 HHRTIINNKIYRIGKSALTEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLR 331
Query: 254 GCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPAXQGCITWGHYK 75
G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A + G K
Sbjct: 332 GAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAF-MGKLK 390
Query: 74 KEXMREEAA 48
++ + E A
Sbjct: 391 RDFLAEAEA 399
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 352 bits (866), Expect = 1e-97
Identities = 167/249 (67%), Positives = 198/249 (79%)
Frame = -3
Query: 794 RYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQD 615
+YCS +RVIAHTQMK+L++RQKKAH++EIQ+NGGTIE KV WAREHLEK + VD+VFAQD
Sbjct: 57 KYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQD 116
Query: 614 EMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGY 435
EMID I TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARAGQKG+
Sbjct: 117 EMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGF 176
Query: 434 HHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIK 255
HHRT +N KIYRIG+ ++G KNN STE+DL++K+ITPMGGFP YG VN D++M++
Sbjct: 177 HHRTIINNKIYRIGKSALTEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLR 233
Query: 254 GCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPAXQGCITWGHYK 75
G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A + G K
Sbjct: 234 GAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAF-MGKLK 292
Query: 74 KEXMREEAA 48
++ + E A
Sbjct: 293 RDFLAEAEA 301
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 352 bits (866), Expect = 1e-97
Identities = 167/249 (67%), Positives = 198/249 (79%)
Frame = -3
Query: 794 RYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQD 615
+YCS +RVIAHTQMK+L++RQKKAH++EIQ+NGGTIE KV WAREHLEK + VD+VFAQD
Sbjct: 155 KYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQD 214
Query: 614 EMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGY 435
EMID I TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARAGQKG+
Sbjct: 215 EMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGF 274
Query: 434 HHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIK 255
HHRT +N KIYRIG+ ++G KNN STE+DL++K+ITPMGGFP YG VN D++M++
Sbjct: 275 HHRTIINNKIYRIGKSALTEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLR 331
Query: 254 GCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPAXQGCITWGHYK 75
G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A + G K
Sbjct: 332 GAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAF-MGKLK 390
Query: 74 KEXMREEAA 48
++ + E A
Sbjct: 391 RDFLAEAEA 399
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 253 bits (619), Expect = 1e-67
Identities = 123/194 (63%), Positives = 145/194 (74%)
Frame = -3
Query: 629 VFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARA 450
V A +MID I TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARA
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARA 221
Query: 449 GQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNND 270
GQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D
Sbjct: 222 GQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQD 278
Query: 269 FVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPAXQGCIT 90
++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A +
Sbjct: 279 YIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAF- 337
Query: 89 WGHYKKEXMREEAA 48
G K++ + E A
Sbjct: 338 MGKLKRDFLAEAEA 351
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -3
Query: 794 RYCSVVRVIAHTQM 753
+YCS +RVIAHTQM
Sbjct: 155 KYCSSIRVIAHTQM 168
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 253 bits (619), Expect = 1e-67
Identities = 123/194 (63%), Positives = 145/194 (74%)
Frame = -3
Query: 629 VFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARA 450
V A +MID I TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARA
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARA 221
Query: 449 GQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNND 270
GQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D
Sbjct: 222 GQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQD 278
Query: 269 FVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPAXQGCIT 90
++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A +
Sbjct: 279 YIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAF- 337
Query: 89 WGHYKKEXMREEAA 48
G K++ + E A
Sbjct: 338 MGKLKRDFLAEAEA 351
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -3
Query: 794 RYCSVVRVIAHTQM 753
+YCS +RVIAHTQM
Sbjct: 155 KYCSSIRVIAHTQM 168
>U13875-9|AAA21160.3| 403|Caenorhabditis elegans Hypothetical
protein C26E6.6 protein.
Length = 403
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = -3
Query: 557 RWHTKKLP-RKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRI 396
RW + P R+T K R++ +G+ +R+ G GY RT +I RI
Sbjct: 241 RWGMRGQPTRRTTKSHRRIGSVGSVGDARIWPGKRMPGHMGYEWRTVSGLEIVRI 295
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,072,257
Number of Sequences: 27780
Number of extensions: 417097
Number of successful extensions: 1138
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1124
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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