Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_N12
         (775 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    23   2.1  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   2.7  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   6.3  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    21   8.3  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +3

Query: 372 QS*IFIHITISQDVVVSVKNCTIF 443
           QS IFI++   +  ++ +KNC I+
Sbjct: 127 QSGIFINLPFLEHNLIRLKNCVIY 150


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 426 KNCTIFVIFVHLYCGKMLISF 488
           KNCTI +IF HL    +L+ F
Sbjct: 40  KNCTIVIIF-HLILFAVLLYF 59


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/29 (24%), Positives = 18/29 (62%)
 Frame = -2

Query: 204 YAVIFVYMQIRFMVKFDYNQINHS*TDIV 118
           +  IF Y+ +   V + ++ I+H+ ++I+
Sbjct: 136 FLYIFTYLSVTCYVTYAWSPIDHTESNII 164


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = -3

Query: 728 NWWHSLSSR 702
           NWWH L ++
Sbjct: 94  NWWHELETK 102


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,764
Number of Sequences: 336
Number of extensions: 3959
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)