Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_N12
         (775 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0633 + 16416913-16417009,16417976-16418060,16418398-164185...    54   1e-07
04_04_0620 + 26656072-26656417,26656585-26657396                       29   4.1  

>05_03_0633 +
           16416913-16417009,16417976-16418060,16418398-16418551,
           16418808-16419023,16419105-16419241,16419317-16419408,
           16419622-16419804,16421722-16421819,16422021-16422070,
           16424605-16424756,16424944-16425069,16426315-16426523
          Length = 532

 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 25/52 (48%), Positives = 37/52 (71%)
 Frame = -2

Query: 771 QLIEPFQVLYERPGELVAQFKFTALLLPSGTHRITGLPFDKSQCKSERSIKD 616
           +L++P+ VL+E+PG+LVA  KFT LLLPSG+ R+T     + Q    +SI+D
Sbjct: 248 ELLQPYPVLHEKPGDLVAHIKFTVLLLPSGSQRVTSHSLQELQ--PTKSIED 297


>04_04_0620 + 26656072-26656417,26656585-26657396
          Length = 385

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -2

Query: 774 PQLIEPFQVLYERPGELVAQFKFTALLLPSGTHRITGLP 658
           PQL+    +  +R   L  +FK TA     G H I GLP
Sbjct: 75  PQLVFAAGIFVDRSLRLRPEFKSTAAAAHGGIHAICGLP 113


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,845,349
Number of Sequences: 37544
Number of extensions: 332453
Number of successful extensions: 631
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 631
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2068401984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)