Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_N07
(543 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_24634| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00054) 31 0.46
SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.61
SB_52226| Best HMM Match : Cytadhesin_P30 (HMM E-Value=9) 31 0.80
SB_46241| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.80
SB_42274| Best HMM Match : Cytadhesin_P30 (HMM E-Value=2.3) 31 0.80
SB_15128| Best HMM Match : Lipase_GDSL (HMM E-Value=0.023) 31 0.80
SB_40728| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.80
SB_30697| Best HMM Match : Cytadhesin_P30 (HMM E-Value=2.3) 31 0.80
SB_30075| Best HMM Match : zf-CHC2 (HMM E-Value=5.4) 31 0.80
SB_59064| Best HMM Match : Adeno_E1A (HMM E-Value=9.3) 30 1.4
SB_29018| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_36681| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_8718| Best HMM Match : Lipase_GDSL (HMM E-Value=0.023) 29 3.2
SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0) 28 4.3
SB_6520| Best HMM Match : MANEC (HMM E-Value=2.2e-12) 28 4.3
SB_20653| Best HMM Match : Sialidase (HMM E-Value=0.35) 28 4.3
SB_56163| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_34104| Best HMM Match : SH2 (HMM E-Value=1.6e-24) 28 5.7
SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1) 28 5.7
SB_15263| Best HMM Match : Jun (HMM E-Value=1.8) 28 5.7
SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_16907| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_15073| Best HMM Match : MED7 (HMM E-Value=2.1) 28 5.7
SB_5593| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_3288| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.5
SB_49373| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.5
SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.5
SB_10797| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.5
SB_56087| Best HMM Match : Extensin_2 (HMM E-Value=0.29) 27 9.9
SB_6033| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=1.6e-37) 27 9.9
SB_42612| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_22167| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
>SB_24634| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00054)
Length = 1012
Score = 31.5 bits (68), Expect = 0.46
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = -2
Query: 362 DGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS-FSWTSPEGVPISVNYVADEN 186
D + T + NN + QG P G P A G+ ++ P P+ + +
Sbjct: 522 DPAVTRKFPVNNRFQQRRQGAPSGFTGIPQARYQAPTGNPQAYCPPTNNPMFRPFPGNPQ 581
Query: 185 GYQ-PTGNAIPT 153
GYQ PT N +PT
Sbjct: 582 GYQKPTTNQLPT 593
>SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2735
Score = 31.1 bits (67), Expect = 0.61
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -2
Query: 497 PFVSVTTPTPFLPIPISSVAPVRVVPKVSEG 405
P + + P PF P+P+ +AP+ + + SEG
Sbjct: 136 PTLPIKLPPPFNPLPVQGIAPLPIKLRPSEG 166
>SB_52226| Best HMM Match : Cytadhesin_P30 (HMM E-Value=9)
Length = 264
Score = 30.7 bits (66), Expect = 0.80
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = -2
Query: 362 DGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS-FSWTSPEGVPISVNYVADEN 186
D + T + NN + QG P G P A G+ ++ P P+ + +
Sbjct: 136 DPAVTRKFPVNNRFQQRRQGAPSGSTGIPQARYQAPTGNPQAYCPPTNNPMFRPFPGNPQ 195
Query: 185 GY-QPTGNAIPT 153
GY QPT N +PT
Sbjct: 196 GYQQPTTNQLPT 207
>SB_46241| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 30.7 bits (66), Expect = 0.80
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = -2
Query: 362 DGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS-FSWTSPEGVPISVNYVADEN 186
D + T + NN + QG P G P A G+ ++ P P+ + +
Sbjct: 136 DPAVTRKFPVNNRFQQRRQGAPSGSTGIPQARYQAPTGNPQAYCPPTNNPMFRPFPGNPQ 195
Query: 185 GY-QPTGNAIPT 153
GY QPT N +PT
Sbjct: 196 GYQQPTTNQLPT 207
>SB_42274| Best HMM Match : Cytadhesin_P30 (HMM E-Value=2.3)
Length = 239
Score = 30.7 bits (66), Expect = 0.80
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = -2
Query: 362 DGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS-FSWTSPEGVPISVNYVADEN 186
D + T + NN + QG P G P A G+ ++ P P+ + +
Sbjct: 136 DPAVTRKFPVNNRFQQRRQGAPSGSTGIPQARYQAPTGNPQAYCPPTNNPMFRPFPGNPQ 195
Query: 185 GY-QPTGNAIPT 153
GY QPT N +PT
Sbjct: 196 GYQQPTTNQLPT 207
>SB_15128| Best HMM Match : Lipase_GDSL (HMM E-Value=0.023)
Length = 346
Score = 30.7 bits (66), Expect = 0.80
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = -2
Query: 362 DGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS-FSWTSPEGVPISVNYVADEN 186
D + T + NN + QG P G P A G+ ++ P P+ + +
Sbjct: 249 DPAVTRKFPVNNRFQQRRQGAPSGSTGIPQARYQAPTGNPQAYCPPTNNPMFRPFPGNPQ 308
Query: 185 GY-QPTGNAIPT 153
GY QPT N +PT
Sbjct: 309 GYQQPTTNQLPT 320
>SB_40728| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1317
Score = 30.7 bits (66), Expect = 0.80
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = -2
Query: 362 DGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS-FSWTSPEGVPISVNYVADEN 186
D + T + NN + QG P G P A G+ ++ P P+ + +
Sbjct: 546 DPAVTRKFPVNNRFQQRRQGAPSGSTGIPQARYQAPTGNPQAYCPPTNNPMFRPFPGNPQ 605
Query: 185 GY-QPTGNAIPT 153
GY QPT N +PT
Sbjct: 606 GYQQPTTNQLPT 617
>SB_30697| Best HMM Match : Cytadhesin_P30 (HMM E-Value=2.3)
Length = 239
Score = 30.7 bits (66), Expect = 0.80
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = -2
Query: 362 DGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS-FSWTSPEGVPISVNYVADEN 186
D + T + NN + QG P G P A G+ ++ P P+ + +
Sbjct: 136 DPAVTRKFPVNNRFQQRRQGAPSGSTGIPQARYQAPTGNPQAYCPPTNNPMFRPFPGNPQ 195
Query: 185 GY-QPTGNAIPT 153
GY QPT N +PT
Sbjct: 196 GYQQPTTNQLPT 207
>SB_30075| Best HMM Match : zf-CHC2 (HMM E-Value=5.4)
Length = 335
Score = 30.7 bits (66), Expect = 0.80
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = -2
Query: 362 DGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS-FSWTSPEGVPISVNYVADEN 186
D + T + NN + QG P G P A G+ ++ P P+ + +
Sbjct: 232 DPAVTRKFPVNNRFQQRRQGAPSGSTGIPQARYQAPTGNPQAYCPPTNNPMFRPFPGNPQ 291
Query: 185 GY-QPTGNAIPT 153
GY QPT N +PT
Sbjct: 292 GYQQPTTNQLPT 303
>SB_59064| Best HMM Match : Adeno_E1A (HMM E-Value=9.3)
Length = 336
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = -2
Query: 248 SFSWTSPEGVPISVNYVADENGYQPTGNAIPTSPPVPEQ 132
SF+ S EG P + E+ Q G+ IPTSPPV E+
Sbjct: 67 SFASVSEEGSPAKKIHFERED--QDPGDQIPTSPPVAER 103
>SB_29018| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1047
Score = 29.5 bits (63), Expect = 1.9
Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Frame = -2
Query: 365 PDGSYTYFYETNNGIAAQEQGVPRNLGGN--PPAVPVVAQGSFSWTSPEGVPISVNYVAD 192
P G Y + + G+ Q+ P ++ N PP +P+ A + P +P +
Sbjct: 671 PQGIPYYGPQASGGVIFQQGPYPSHMPANAPPPNIPIQANFPRNIPPPNYIPPTQQMSFQ 730
Query: 191 ENGY-QPTGNAIPTSPPVPE 135
+ Y +P N IPT V E
Sbjct: 731 HSPYNRPPPNVIPTGNMVIE 750
>SB_36681| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1081
Score = 29.1 bits (62), Expect = 2.5
Identities = 26/109 (23%), Positives = 37/109 (33%), Gaps = 3/109 (2%)
Frame = -2
Query: 455 PISSVAPVRVVPKVSEGYGAETVKFGNEINPDGSY--TYFYETNNGIAAQEQGVPRNLGG 282
P S+V P V S TV+ N + P + T E + + P N
Sbjct: 79 PTSTVEPTNTVEPTSTAEPTNTVEPTNTVEPTSTVEPTNTVEPTSTVEPTSTVEPTNTVE 138
Query: 281 NPPAV-PVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAIPTSPPVP 138
V P S P + + V + +PT +PTS VP
Sbjct: 139 PTSTVEPTSTVEPTSTVVPTSTVVPTSTVEPTSTVEPTSTVVPTSTVVP 187
>SB_8718| Best HMM Match : Lipase_GDSL (HMM E-Value=0.023)
Length = 836
Score = 28.7 bits (61), Expect = 3.2
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = -2
Query: 362 DGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGS-FSWTSPEGVPISVNYVADEN 186
D + T + NN + QG P G P A G+ ++ P P+ + +
Sbjct: 229 DPAVTRKFPVNNRFQQRRQGAPSGSTGIPQARYQAPTGNPQAYCPPTYNPMFRPFPDNPQ 288
Query: 185 GY-QPTGNAIPT 153
GY QPT N +PT
Sbjct: 289 GYQQPTTNQLPT 300
>SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0)
Length = 1467
Score = 28.3 bits (60), Expect = 4.3
Identities = 31/116 (26%), Positives = 45/116 (38%), Gaps = 5/116 (4%)
Frame = -2
Query: 479 TPTPFLPIPISSVAPVRVVPKV-SEGYGAETVKF-GNEINPDGSYTYFYETNNGIAAQEQ 306
+PTP P+ +P P S GY + F + + + + T+ G +
Sbjct: 386 SPTPGSPVSPGPTSPYIPSPAAASPGYSPSSPAFMPSSPSMSPASPSYSPTSPGYSPSSP 445
Query: 305 GVPRNLGGNPPAVPVVA--QGSFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 147
G PA P + S+S TSP P S +Y Y PT + PTSP
Sbjct: 446 S-----SGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 496
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -2
Query: 248 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 147
S+S TSP P S +Y Y PT + PTSP
Sbjct: 469 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 503
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -2
Query: 248 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 147
S+S TSP P S +Y Y PT + PTSP
Sbjct: 476 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 510
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -2
Query: 248 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 147
S+S TSP P S +Y Y PT + PTSP
Sbjct: 483 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 517
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -2
Query: 248 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 147
S+S TSP P S +Y Y PT + PTSP
Sbjct: 490 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 524
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -2
Query: 248 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 147
S+S TSP P S +Y Y PT + PTSP
Sbjct: 497 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 531
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -2
Query: 248 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 147
S+S TSP P S +Y Y PT + PTSP
Sbjct: 504 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 538
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -2
Query: 248 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 147
S+S TSP P S +Y Y PT + PTSP
Sbjct: 511 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 545
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -2
Query: 248 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 147
S+S TSP P S +Y Y PT + PTSP
Sbjct: 518 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 552
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -2
Query: 248 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 147
S+S TSP P S +Y Y PT + PTSP
Sbjct: 525 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 559
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -2
Query: 248 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 147
S+S TSP P S +Y Y PT + PTSP
Sbjct: 532 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 566
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -2
Query: 248 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 147
S+S TSP P S +Y Y PT + PTSP
Sbjct: 539 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 573
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -2
Query: 248 SFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 147
S+S TSP P S +Y Y PT + PTSP
Sbjct: 546 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 580
>SB_6520| Best HMM Match : MANEC (HMM E-Value=2.2e-12)
Length = 452
Score = 28.3 bits (60), Expect = 4.3
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Frame = -3
Query: 298 PVTLVETPLLFPS----LHRAHSPGHLLKVFPSASITSP 194
P TL + PL +PS + + HS G+ +V+P + +P
Sbjct: 334 PTTLAKAPLTYPSKGIVIEKGHSCGYGQQVYPQGARANP 372
>SB_20653| Best HMM Match : Sialidase (HMM E-Value=0.35)
Length = 572
Score = 28.3 bits (60), Expect = 4.3
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -3
Query: 220 FPSASITSPTRMDTSPLVMLSPLPHQCLSRSLVLLPTSP 104
+P + ITS D S + S LP C + + PT+P
Sbjct: 166 YPRSDITSMANSDVSSGAIYSSLPSVCPPKGTHMTPTAP 204
>SB_56163| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 27.9 bits (59), Expect = 5.7
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = -2
Query: 284 GNPPAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAIPTSPP 144
GNPP PV +F + P + Y A + P G ++P PP
Sbjct: 105 GNPPYPPVDQYSAFPY--PPQDQQAPPYPAQNQYWNPQGTSLPPPPP 149
>SB_34104| Best HMM Match : SH2 (HMM E-Value=1.6e-24)
Length = 421
Score = 27.9 bits (59), Expect = 5.7
Identities = 26/113 (23%), Positives = 44/113 (38%), Gaps = 3/113 (2%)
Frame = -2
Query: 497 PFVSVTTPTPFLPIPISSVAPVRVVPKVSEGYGA--ETVKFGNEINPDGSYTYFYETNNG 324
PF S +TP P P P PK E + A +TVK +
Sbjct: 183 PFPSTSTPPPLPGRPTLEPTPEASAPK-QESFEAIYDTVKMKKSSGYHNQFKAVQSQTFE 241
Query: 323 IAAQEQGVPRNLG-GNPPAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTG 168
+ + + + LG GN V +G++ + E +P++V + ++ P G
Sbjct: 242 LKMENLSLGKELGHGN---FGSVLKGTYKMPNGERIPVAVKSLKSDDINNPKG 291
>SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1)
Length = 2075
Score = 27.9 bits (59), Expect = 5.7
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -2
Query: 509 STYRPFVSVTTPTPFLPIPISSVAPVRVVP 420
ST P S++TPTPF P S PV P
Sbjct: 811 STGMPPASLSTPTPFFTHPGFSTKPVTTSP 840
>SB_15263| Best HMM Match : Jun (HMM E-Value=1.8)
Length = 315
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 509 STYRPFVSVTTPTPFLPIPISSVAPVRVVP 420
+T +P ++ TTP P PIS + P R P
Sbjct: 139 ATTKPVMTPTTPAPMTLPPISPIDPPRTQP 168
>SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3176
Score = 27.9 bits (59), Expect = 5.7
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = -3
Query: 250 AHSPGHLLKVFPSASITSPTRMDTSPLV-MLSPLPHQCLSRSLVLLPTSPRT 98
A+ P H V SA+ SP+ DTS +V +S PH ++ + +P T
Sbjct: 2226 ANIPLHSSSVTSSAAFCSPSNTDTSRVVGRVSQAPHNSITSRINESEVAPST 2277
>SB_16907| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 886
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -2
Query: 191 ENGYQPTGNAIPTSPPVPEQ 132
EN YQP P SPP P+Q
Sbjct: 117 ENSYQPVELFAPNSPPKPQQ 136
>SB_15073| Best HMM Match : MED7 (HMM E-Value=2.1)
Length = 644
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -2
Query: 287 GGNPPAVPVVAQGSFSWTSPEGVPISVNYVADENGY 180
G P +PV + + W G PIS+N N Y
Sbjct: 146 GSLPDYIPVYSPETIVWGQSSGAPISINSSVIVNAY 181
>SB_5593| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 964
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -2
Query: 269 VPVVAQGSFSWTSPEGVPISVNYVADENGY 180
+PV + G+ W G PIS+N N Y
Sbjct: 171 IPVYSPGTIVWGQSSGAPISINSSLIVNAY 200
>SB_3288| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 352
Score = 27.5 bits (58), Expect = 7.5
Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Frame = +1
Query: 115 ARARAICSGTGGEVGIA----LPVGWYPFSSAT*LTLMGTPSGDVQENEPCATTGTAGGF 282
ARAR C +G+A +G Y TP+ + + +P AT GT
Sbjct: 109 ARARRRCRARRSVIGVAGLLVSLIGLYTRRRELAAAFTRTPAVNQRATDPLATGGTDDVT 168
Query: 283 PPRLR 297
PP LR
Sbjct: 169 PPTLR 173
>SB_49373| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = -3
Query: 268 FPSLHRAHSPGHLLKVFPSASITSPT--RMDTSPLVMLSPLPHQCLSR 131
F L +AH+P H+L VFP+ T + + P V++ +C +R
Sbjct: 3 FLYLSQAHTPPHILLVFPAKKCNRGTLSKNWSGPTVLIELAKGKCQTR 50
>SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1141
Score = 27.5 bits (58), Expect = 7.5
Identities = 20/78 (25%), Positives = 26/78 (33%)
Frame = -2
Query: 338 ETNNGIAAQEQGVPRNLGGNPPAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAI 159
ET +G PR P P S + T+PE S+ A E P
Sbjct: 449 ETTTAXXXXGRGYPR------PTAPETTTASLATTAPETTTASLVTTAPETTTAPEATLA 502
Query: 158 PTSPPVPEQIARALAYIA 105
P + PE +L A
Sbjct: 503 PEATTAPEAATASLVTTA 520
>SB_10797| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 754
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = +1
Query: 148 GEVGIALPVGWYPFSSAT*LTLMGTPSGDVQENEPCATTGTAGGFPPRLR 297
G G+ + +G Y TP+ + +P AT GT PP LR
Sbjct: 600 GVAGLLVLIGLYTRRRELAAAFTRTPAAKQRATDPLATEGTDDVTPPTLR 649
>SB_56087| Best HMM Match : Extensin_2 (HMM E-Value=0.29)
Length = 403
Score = 27.1 bits (57), Expect = 9.9
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = -3
Query: 298 PVTLVETPLLFPSLHRAHS-PGHLLKVFPSASITSPTRMDTSPLVMLSPLPHQCLSRSLV 122
P+ + T L SL + S P + L P++ S + PL PLP S SLV
Sbjct: 280 PLPRITTSLFLVSLQASPSYPYNPLPRIPTS--LSLVSLQAPPLYTYKPLPRISTSLSLV 337
Query: 121 LLPTSP 104
L SP
Sbjct: 338 SLQASP 343
>SB_6033| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=1.6e-37)
Length = 1052
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = -2
Query: 257 AQGSFSWTSPEGVPISVNYVADENGYQPTGNAI-PTSP 147
A S+S TSP P S +Y + Y P + PTSP
Sbjct: 685 ASPSYSPTSPSYSPASPSYTSASPSYSPASPSYSPTSP 722
>SB_42612| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 27.1 bits (57), Expect = 9.9
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 12/100 (12%)
Frame = -2
Query: 530 KKNPYRYSTYRPFVSVTTPTPFLPI--PISSVAPVR----VVPKVSEGYGAETVKFGN-- 375
+K R T +SV+ P P PI++ +P R VP + + + GN
Sbjct: 427 RKPVTRPKTTSGTLSVSKSIPPRPSTEPITTSSPYRHSWSYVPNFVDYHSPTSSHTGNVR 486
Query: 374 --EINPDGSYTYFYETNNGIAAQEQG--VPRNLGGNPPAV 267
E+NPDG+Y + T+ + G + +N+ G P V
Sbjct: 487 ILEVNPDGNYVRLFNTSAHRDEEIGGYMIQQNVAGRPVTV 526
>SB_22167| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1612
Score = 27.1 bits (57), Expect = 9.9
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = -2
Query: 539 EXYKKNPYRYSTYRPFVSVTTPTPFLPIP--ISSVAPVRVVPKVSEGY 402
E K NPYR+ V + + F + +S +AP V+P VS Y
Sbjct: 257 EGEKSNPYRHLPNYVTVPYSDHSSFKELLRFVSGIAPAEVIPLVSSCY 304
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,979,605
Number of Sequences: 59808
Number of extensions: 386140
Number of successful extensions: 1305
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1290
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1239956166
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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