Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_N06
         (541 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    23   2.0  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   8.1  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   8.1  

>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 198 RYQPWISTSENSKLILFKKNSE 133
           R + W++TS      LF +NSE
Sbjct: 271 RVESWVNTSVIRNYTLFNENSE 292


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -1

Query: 457 MTKVAIILLILAAVYGLEGAA 395
           M    ++L+ LAA+ G +GA+
Sbjct: 1   MLSKVVLLVALAAICGAQGAS 21


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -1

Query: 457 MTKVAIILLILAAVYGLEGAA 395
           M    ++L+ LAA+ G +GA+
Sbjct: 1   MLSKVVLLVALAAICGAQGAS 21


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,876
Number of Sequences: 438
Number of extensions: 2599
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15336375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)