Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_N05
         (678 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       24   1.00 
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    24   1.00 
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    24   1.00 
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    22   4.0  
AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    22   4.0  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   7.0  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   9.3  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           21   9.3  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   9.3  

>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 24.2 bits (50), Expect = 1.00
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = +2

Query: 428 HSTTRHNKQQHRRVDAHCTLITHHHSFFTMS 520
           H   +  KQQ      H ++  HHH    MS
Sbjct: 85  HKQQQQEKQQKIEQQTHSSIHQHHHDPMKMS 115


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 24.2 bits (50), Expect = 1.00
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = +2

Query: 428 HSTTRHNKQQHRRVDAHCTLITHHHSFFTMS 520
           H   +  KQQ      H ++  HHH    MS
Sbjct: 236 HKQQQQEKQQKIEQQTHSSIHQHHHDPMKMS 266


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 24.2 bits (50), Expect = 1.00
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = +2

Query: 428 HSTTRHNKQQHRRVDAHCTLITHHHSFFTMS 520
           H   +  KQQ      H ++  HHH    MS
Sbjct: 295 HKQQQQEKQQKIEQQTHSSIHQHHHDPMKMS 325



 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/29 (34%), Positives = 14/29 (48%), Gaps = 5/29 (17%)
 Frame = +1

Query: 421 SGPQHDPAQQATTPPSR-----CTLHTHH 492
           S PQH  +  +T+P +R        H HH
Sbjct: 43  SSPQHSSSSASTSPAARMYPYVSAAHHHH 71


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
 Frame = -1

Query: 675 TPPPS---EAPRDSPSPTEPPKLNLQMTAA 595
           TPP S   +  +D  SPT   KLN   T++
Sbjct: 34  TPPQSPNQQYTKDCSSPTPSDKLNTSTTSS 63


>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 529 PKVHRHFLRVELLLGGEMC 585
           P   RHF +  L++G E C
Sbjct: 37  PCYGRHFFKKNLIVGSENC 55


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/29 (34%), Positives = 14/29 (48%), Gaps = 5/29 (17%)
 Frame = +1

Query: 421 SGPQHDPAQQATTPPSR-----CTLHTHH 492
           S PQH  +  +T+P +R        H HH
Sbjct: 43  SSPQHSSSSASTSPAARMYPYVSAAHHHH 71


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 10/43 (23%), Positives = 18/43 (41%)
 Frame = -1

Query: 675 TPPPSEAPRDSPSPTEPPKLNLQMTAAEMRAHLAAKKKFDPKK 547
           TPPP +  ++SP      K + +       A +    +  P+K
Sbjct: 60  TPPPLDCSKNSPEKESEEKKSKEKPPYSYNALIMMAIRNSPEK 102


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = -1

Query: 672 PPPSEAPRDSPSPTEPPKLNLQMTAAE 592
           P PS     S +PT PP    Q+   E
Sbjct: 133 PSPSTTDDLSTNPTPPPHYTYQIIPYE 159


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -3

Query: 613 PADDRGRDASTS 578
           PADDRGR A+ +
Sbjct: 171 PADDRGRVAAAA 182


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,633
Number of Sequences: 336
Number of extensions: 2985
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)