Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_N05
(678 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1083 - 34403769-34403774,34403819-34403918,34404235-344043... 32 0.37
05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365... 31 0.85
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 30 2.0
04_03_0094 - 11113279-11114469 30 2.0
10_08_0521 + 18500105-18500529,18501216-18501284,18501467-185015... 29 2.6
06_03_0849 - 25344261-25344416,25344652-25344808,25344917-253450... 29 2.6
04_04_1461 - 33767398-33767780,33768032-33768116 29 2.6
03_05_0864 - 28362146-28362500,28362585-28362629,28362727-28363085 29 2.6
12_02_1057 + 25733376-25735439 29 3.4
12_02_0017 - 12357029-12357070,12357434-12357503,12357722-123578... 29 3.4
08_02_0880 + 22203440-22204324,22204763-22204876,22204964-222054... 29 3.4
01_03_0117 + 12684729-12685886,12685978-12686145,12686292-126863... 29 3.4
01_01_0884 - 6956337-6956431,6956514-6957651 29 3.4
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 29 4.5
01_06_1321 + 36280691-36281269 29 4.5
11_08_0081 - 28216179-28216381,28216590-28216657,28217131-282172... 28 6.0
07_03_0560 + 19479597-19480667 28 6.0
07_03_0177 - 14770777-14772045 28 6.0
02_04_0463 + 23135732-23136888,23138956-23139333,23139506-23139530 28 6.0
10_08_1008 - 22222051-22222377,22222479-22222640,22223179-222233... 28 7.9
06_01_0978 + 7595641-7595843,7595952-7596072,7596176-7596253,759... 28 7.9
05_07_0146 + 28018236-28018580,28018670-28018777,28018984-280191... 28 7.9
04_04_0410 - 25010455-25011819 28 7.9
03_02_0650 + 10174905-10175000,10175321-10175376,10175467-101755... 28 7.9
01_03_0008 + 11594061-11594078,11594201-11594285,11594506-11595149 28 7.9
>01_06_1083 -
34403769-34403774,34403819-34403918,34404235-34404318,
34404427-34404506,34404614-34404707,34404796-34404887,
34405335-34405425,34405617-34405719,34405919-34406008,
34406154-34406235,34406434-34406481,34406601-34406897,
34406992-34407078,34408047-34408247,34408329-34408533,
34409362-34410152
Length = 816
Score = 32.3 bits (70), Expect = 0.37
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -1
Query: 675 TPPPSEAPRDSPSPTEPPKLNLQMTAAEMRAHLAAKKKFDPKK 547
TPPP +P P P P L AE + ++ KKK P++
Sbjct: 39 TPPPPPSPSSPPEPANSPS-RLLRELAERKKAVSPKKKHPPRR 80
>05_01_0004 -
34967-35149,35340-35501,36078-36225,36309-36385,
36507-36577,36850-37263,37518-38268
Length = 601
Score = 31.1 bits (67), Expect = 0.85
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -1
Query: 672 PPPSEAPRDSPSPTEPP 622
PPP PR+SPSP +PP
Sbjct: 80 PPPPPPPRNSPSPPKPP 96
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 675 TPPPSEAPRDSPSPTEPPKLNLQM 604
+PPPS P P PT+PP Q+
Sbjct: 115 SPPPSAPPPPPPPPTQPPPREAQL 138
>04_03_0094 - 11113279-11114469
Length = 396
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
Frame = +2
Query: 464 RVDAHCTLITHHHSFFTMSNLDLRSI---GTFLGSNFFLAARCARISAAV--ICRFSLGG 628
R+D+ + HH S + LR++ G G NFF A C + A IC LG
Sbjct: 231 RLDSFAMICCHHASHVVLQAERLRTLRYKGGLPGENFFSIANCGDVLAMTIDICESLLGK 290
Query: 629 S 631
S
Sbjct: 291 S 291
>10_08_0521 +
18500105-18500529,18501216-18501284,18501467-18501555,
18501726-18501838,18502023-18502124,18502576-18502663,
18502795-18503361,18503766-18504149,18504168-18504384,
18504466-18504548,18505174-18505256,18505796-18506032,
18506481-18506658,18506814-18507328,18507740-18507916,
18508385-18508768,18508885-18509031
Length = 1285
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = -1
Query: 669 PPSEAPRDSPSPTEPPKLNLQMTAAEMRAHLAAKKKFDPKKVPMDLRSKFDIV 511
PPSE ++ S P + + +++E A + FDP +P D+R IV
Sbjct: 545 PPSEDLKNPQSYVPMPTTSDERSSSECSVDRANRLSFDPYDLPNDVRQLAQIV 597
>06_03_0849 -
25344261-25344416,25344652-25344808,25344917-25345056,
25345160-25345295,25345392-25345663,25345809-25346068,
25346716-25347035,25347287-25347352,25347439-25347510,
25347609-25347680,25347776-25347858,25348068-25348139,
25348389-25348485,25348918-25349050,25349158-25349236
Length = 704
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 502 QFLHDVKLGPKVHRHFLRVELLLGGEMCSHL 594
++LH+V L P VHR+ +LL E HL
Sbjct: 509 EYLHEVCLPPVVHRNLKSANILLDKEYSPHL 539
>04_04_1461 - 33767398-33767780,33768032-33768116
Length = 155
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -1
Query: 672 PPPSEAPRDSPSP-TEPPKLNLQMTAAEMRAHLAAKKKFDPK 550
PPP+ + S +P TE ++ Q AAE + + AA +K P+
Sbjct: 71 PPPASSSSSSSNPSTEQQQIKKQAPAAEEKVYTAAAEKRAPE 112
>03_05_0864 - 28362146-28362500,28362585-28362629,28362727-28363085
Length = 252
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = -1
Query: 672 PPPSEAPRDSPSPTEPPKLNLQMTAAEMRAHLAAKKKFDPKK-VPMDLRSKFDIVKKL*W 496
PPP + P +P+PT+ + Q A RA AA D V L +F I L W
Sbjct: 35 PPPEQQP-PTPTPTQQQSMQAQPQARPRRAPAAAASGADSTDWVATSLTRRFGIGAGLAW 93
>12_02_1057 + 25733376-25735439
Length = 687
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -1
Query: 672 PPPSEAPRDSPSPTEPP 622
PPPS P SP+P PP
Sbjct: 261 PPPSRPPSSSPAPPSPP 277
>12_02_0017 -
12357029-12357070,12357434-12357503,12357722-12357852,
12358836-12358882,12359762-12360044,12360547-12362413,
12362454-12362665
Length = 883
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -3
Query: 409 RRAPRPSPPHTDTDSFSRDYHMNVHK*CGTMTSVWSK 299
RRAP P P D F Y + VH ++S+W +
Sbjct: 20 RRAPPPPPSAADEGPFPDPYALLVHDPIDLLSSLWRR 56
>08_02_0880 +
22203440-22204324,22204763-22204876,22204964-22205455,
22205646-22205819,22206589-22206978,22209927-22210022,
22210645-22210760,22210872-22211042,22211126-22211285,
22211388-22211573,22211665-22211793,22211918-22211996,
22212159-22212268
Length = 1033
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -1
Query: 675 TPPPSEAPRDSPSPTEPPKLNLQMTAAEMRAHLAAK 568
+P P+ APR +P+P+EPP AA R + A+
Sbjct: 138 SPSPAPAPR-APTPSEPPPPREAAMAARERRRIQAR 172
>01_03_0117 +
12684729-12685886,12685978-12686145,12686292-12686336,
12686438-12687280
Length = 737
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = -1
Query: 672 PPPSEAPRDSPS-PTEPPKLNLQMTA 598
PPP+ AP ++P+ PT PP L TA
Sbjct: 274 PPPAHAPAETPAPPTTPPALPPATTA 299
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1
Query: 669 PPSEAPRDSPSPTEPPK 619
PP+E P SPSP PP+
Sbjct: 196 PPAEPPVPSPSPEHPPR 212
>01_01_0884 - 6956337-6956431,6956514-6957651
Length = 410
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -1
Query: 672 PPPSEAPRDSPSPTEPP 622
P PS +P SP+PT+PP
Sbjct: 265 PSPSPSPSPSPAPTQPP 281
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -1
Query: 672 PPPSEAPRDSPSPTEPPKLN 613
PPP P P P PPKLN
Sbjct: 349 PPPPPPPPPPPPPPPPPKLN 368
>01_06_1321 + 36280691-36281269
Length = 192
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -1
Query: 675 TPPPSEAPRDSPSPTEPPKLNLQMTAAEMRAHLAAKKKFDPKK 547
TPPPS P P P PP + + AA+ A + P +
Sbjct: 142 TPPPSPPPPPPPPPPLPPAMYVPCFAAKPPLDAANRSDSPPSR 184
>11_08_0081 -
28216179-28216381,28216590-28216657,28217131-28217298,
28217370-28217436,28217509-28217576,28218256-28218420,
28218490-28218556,28218629-28218696,28219855-28219992,
28220189-28220353,28221227-28221304,28221380-28221532,
28222753-28222823,28223077-28223203,28223306-28223565,
28223679-28223842,28224287-28224450,28225873-28226159
Length = 826
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/25 (44%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Frame = -3
Query: 406 RAPRPSPP-HTDTDSFSRDYHMNVH 335
R+PRPSPP + + S+SR + +++H
Sbjct: 551 RSPRPSPPGQSHSRSYSRSHSLHLH 575
>07_03_0560 + 19479597-19480667
Length = 356
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +2
Query: 620 LGGSVGDGLSRGASLGGGV 676
LGG G GL G LGGG+
Sbjct: 300 LGGGAGGGLGHGGGLGGGL 318
>07_03_0177 - 14770777-14772045
Length = 422
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 614 FSLGGSVGDGLSRGASLGGG 673
F GG +G G +G LGGG
Sbjct: 345 FGKGGGIGGGFGKGGGLGGG 364
Score = 27.9 bits (59), Expect = 7.9
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 623 GGSVGDGLSRGASLGGGV 676
GG +G G+ +G LGGG+
Sbjct: 236 GGGLGGGIGKGGGLGGGI 253
>02_04_0463 + 23135732-23136888,23138956-23139333,23139506-23139530
Length = 519
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = -1
Query: 675 TPPPSEAPRDSPSPTEPPKLNLQMTAAEMRAHLAAKKKFDPKKVPMDLRSK 523
TPPP+EA R PSP AA R + A+K D +K+ ++ K
Sbjct: 269 TPPPAEAARSRPSP---------FGAARPREDILAEKGLDWRKMETEIDHK 310
>10_08_1008 -
22222051-22222377,22222479-22222640,22223179-22223310,
22224556-22224608,22224713-22225256
Length = 405
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -1
Query: 672 PPPSEAPRDSPSPTEPPKLNLQMTAAEMRAHLAA 571
PPP+ AP PS PP L A A+ AA
Sbjct: 21 PPPAAAPAPPPSQPPPPPLPFAQQAPPPAANPAA 54
>06_01_0978 +
7595641-7595843,7595952-7596072,7596176-7596253,
7596371-7596436,7596556-7596688,7596774-7596841,
7596930-7597002,7597097-7597158,7597240-7597633,
7597768-7597832
Length = 420
Score = 27.9 bits (59), Expect = 7.9
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -1
Query: 669 PPSEAPRDSPSPTEPPKL 616
PP+ AP +P+P +PP+L
Sbjct: 16 PPAPAPAPAPAPYQPPRL 33
>05_07_0146 +
28018236-28018580,28018670-28018777,28018984-28019148,
28019269-28019736,28019823-28019936,28020038-28020715
Length = 625
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = -1
Query: 672 PPPSEAPRDSPSPTEPPKLNLQMTAAEMRAHLAAKKKFDPK 550
PPP A P P P LQ AE +A + F K
Sbjct: 492 PPPPPASSTQPQPPRPEPAQLQAALAEAARPVALPQLFGQK 532
>04_04_0410 - 25010455-25011819
Length = 454
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = +2
Query: 485 LITHHHSFFTMSNLDLRSIGTFLGSNFFLAARCARISAAVICRFSLGG 628
L TH F+ N SI F G L + R IC FS+GG
Sbjct: 386 LATHGGQLFSSMN---DSISVFSGPECVLTSTLRRSHGGAICDFSIGG 430
>03_02_0650 +
10174905-10175000,10175321-10175376,10175467-10175540,
10176215-10176753,10176845-10177186,10177520-10177879,
10177982-10178193,10178881-10179169,10179469-10180152
Length = 883
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = -1
Query: 675 TPPPSEAPRDSPSP-TEPPKLNLQMTAAE-MRAHLAAKKKFDP 553
TPPP AP + SP EPPK +TA E +RA K +P
Sbjct: 731 TPPPPAAPSANGSPPQEPPK-RAPLTARERLRAARVLGKYAEP 772
>01_03_0008 + 11594061-11594078,11594201-11594285,11594506-11595149
Length = 248
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 3/29 (10%)
Frame = -1
Query: 672 PPPSEAPRDSPSPTE---PPKLNLQMTAA 595
PPP EAP P+P+E PP AA
Sbjct: 98 PPPEEAPAAEPAPSEAAPPPPAEADQAAA 126
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,236,205
Number of Sequences: 37544
Number of extensions: 326348
Number of successful extensions: 2431
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2384
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -