Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_N05
         (678 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL833927-1|CAD38783.1|  843|Homo sapiens hypothetical protein pr...    31   3.8  
AB040976-1|BAA96067.1|  917|Homo sapiens KIAA1543 protein protein.     31   3.8  
BC064483-1|AAH64483.1|  525|Homo sapiens chromosome 17 open read...    30   8.7  
AY044869-1|AAK97789.1| 3124|Homo sapiens p400 SWI2/SNF2-related ...    30   8.7  
AK128728-1|BAC87593.1|  441|Homo sapiens EC 2.4.99.1).  protein.       30   8.7  
AK127221-1|BAC86888.1|  441|Homo sapiens protein ( Homo sapiens ...    30   8.7  
AK056090-1|BAB71091.1|  525|Homo sapiens protein ( Homo sapiens ...    30   8.7  
AB058721-1|BAB47447.1| 1157|Homo sapiens KIAA1818 protein protein.     30   8.7  

>AL833927-1|CAD38783.1|  843|Homo sapiens hypothetical protein
           protein.
          Length = 843

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
 Frame = -1

Query: 672 PPPSEAPRDSPSPTEPPKLNLQ-MTAAEMRAH----LAAKKKFDPKKVPMDLRS 526
           P PS++PR SP  T P +L L  +T      H    L   +KF P +VP+  RS
Sbjct: 366 PGPSQSPR-SPKHTRPAELRLAPLTRVLTPPHDVDSLPHLRKFSPSQVPVQTRS 418


>AB040976-1|BAA96067.1|  917|Homo sapiens KIAA1543 protein protein.
          Length = 917

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
 Frame = -1

Query: 672 PPPSEAPRDSPSPTEPPKLNLQ-MTAAEMRAH----LAAKKKFDPKKVPMDLRS 526
           P PS++PR SP  T P +L L  +T      H    L   +KF P +VP+  RS
Sbjct: 440 PGPSQSPR-SPKHTRPAELRLAPLTRVLTPPHDVDSLPHLRKFSPSQVPVQTRS 492


>BC064483-1|AAH64483.1|  525|Homo sapiens chromosome 17 open reading
           frame 56 protein.
          Length = 525

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
 Frame = -1

Query: 675 TPPPSEAPRDSPSPTEPP---KLNLQMTAAEMRAHLAAKKKFDPKKVP 541
           +P PS     SP PT PP    +      +E  A LA  +++ P+++P
Sbjct: 403 SPAPSSGMPSSPVPTPPPDASPIPAPGDPSEAEARLAESRRWRPERIP 450


>AY044869-1|AAK97789.1| 3124|Homo sapiens p400 SWI2/SNF2-related
            protein protein.
          Length = 3124

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = -1

Query: 672  PPPSEAPRDSPSPTEPPKLNLQMTAAEMR 586
            P P++ P  S SP++ PKL +++ A  ++
Sbjct: 3088 PNPAQVPASSDSPSQQPKLQMRVPAVRLK 3116


>AK128728-1|BAC87593.1|  441|Homo sapiens EC 2.4.99.1).  protein.
          Length = 441

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
 Frame = -1

Query: 675 TPPPSEAPRDSPSPTEPP---KLNLQMTAAEMRAHLAAKKKFDPKKVP 541
           +P PS     SP PT PP    +      +E  A LA  +++ P+++P
Sbjct: 319 SPAPSSGMPSSPVPTPPPDASPIPAPGDPSEAEARLAESRRWRPERIP 366


>AK127221-1|BAC86888.1|  441|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45288 fis, clone BRHIP3002141. ).
          Length = 441

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
 Frame = -1

Query: 675 TPPPSEAPRDSPSPTEPP---KLNLQMTAAEMRAHLAAKKKFDPKKVP 541
           +P PS     SP PT PP    +      +E  A LA  +++ P+++P
Sbjct: 319 SPAPSSGMPSSPVPTPPPDASPIPAPGDPSEAEARLAESRRWRPERIP 366


>AK056090-1|BAB71091.1|  525|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31528 fis, clone NT2RI2000412. ).
          Length = 525

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
 Frame = -1

Query: 675 TPPPSEAPRDSPSPTEPP---KLNLQMTAAEMRAHLAAKKKFDPKKVP 541
           +P PS     SP PT PP    +      +E  A LA  +++ P+++P
Sbjct: 403 SPAPSSGMPSSPVPTPPPDASPIPAPGDPSEAEARLAESRRWRPERIP 450


>AB058721-1|BAB47447.1| 1157|Homo sapiens KIAA1818 protein protein.
          Length = 1157

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = -1

Query: 672  PPPSEAPRDSPSPTEPPKLNLQMTAAEMR 586
            P P++ P  S SP++ PKL +++ A  ++
Sbjct: 1121 PNPAQVPASSDSPSQQPKLQMRVPAVRLK 1149


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,638,899
Number of Sequences: 237096
Number of extensions: 1699369
Number of successful extensions: 8645
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8563
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)