Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_N05
(678 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 31 0.76
AF326939-1|AAG49389.1| 109|Caenorhabditis elegans mitochondrial... 30 1.7
AF038604-5|AAB92010.1| 109|Caenorhabditis elegans Hypothetical ... 30 1.7
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 29 2.3
U40059-1|AAA81138.3| 867|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z70780-13|CAD18872.2| 368|Caenorhabditis elegans Hypothetical p... 28 5.3
Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z83233-8|CAB05759.2| 378|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical pr... 27 9.3
AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical... 27 9.3
AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical... 27 9.3
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 31.1 bits (67), Expect = 0.76
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -1
Query: 672 PPPSEAPRDSPSPTEPPK 619
PP +E P+ P PTEPPK
Sbjct: 392 PPRTEPPKTEPPPTEPPK 409
Score = 31.1 bits (67), Expect = 0.76
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -1
Query: 672 PPPSEAPRDSPSPTEPPKLNLQMT 601
PP +EAPR P TEPPK T
Sbjct: 565 PPRTEAPRTEPPRTEPPKTEAPRT 588
Score = 29.1 bits (62), Expect = 3.0
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 672 PPPSEAPRDSPSPTEPPK 619
PPP+E P+ P T PPK
Sbjct: 402 PPPTEPPKTEPPKTTPPK 419
Score = 28.7 bits (61), Expect = 4.0
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -1
Query: 672 PPPSEAPRDSPSPTEPPKL 616
PP +E P+ P TEPPK+
Sbjct: 372 PPRTEPPKTEPPTTEPPKI 390
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -1
Query: 672 PPPSEAPRDSPSPTEPPKLNLQMT 601
PP +EAPR P TE P + MT
Sbjct: 665 PPKTEAPRTVPPKTEAPMTEVPMT 688
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = -1
Query: 672 PPPSEAPRDSPSPTEPPKLNLQMTA 598
PP +EAPR TEPPK TA
Sbjct: 605 PPMTEAPRTEVPMTEPPKTEPPRTA 629
>AF326939-1|AAG49389.1| 109|Caenorhabditis elegans mitochondrial
ATPase inhibitor protein.
Length = 109
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 575 ARCARISAAVICRFSLGGSVGDGLSRGASLGGGV 676
+R A ++ RFS GG GDG RG GG +
Sbjct: 5 SRAATRMTGMVARFSAGGH-GDGAGRGGGSGGSI 37
>AF038604-5|AAB92010.1| 109|Caenorhabditis elegans Hypothetical
protein B0546.1 protein.
Length = 109
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 575 ARCARISAAVICRFSLGGSVGDGLSRGASLGGGV 676
+R A ++ RFS GG GDG RG GG +
Sbjct: 5 SRAATRMTGMVARFSAGGH-GDGAGRGGGSGGSI 37
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical protein
F35A5.1 protein.
Length = 1274
Score = 29.5 bits (63), Expect = 2.3
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 672 PPPSEAPRDSPSPTEPPK 619
P P E ++ P PTEPPK
Sbjct: 1207 PKPKEVSKEPPKPTEPPK 1224
>U40059-1|AAA81138.3| 867|Caenorhabditis elegans Hypothetical
protein K03C7.1 protein.
Length = 867
Score = 29.5 bits (63), Expect = 2.3
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 672 PPPSEAPRDSPSPTEPPK 619
P P + P++ P P EPPK
Sbjct: 326 PKPKDLPKEEPKPAEPPK 343
Score = 29.1 bits (62), Expect = 3.0
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 675 TPPPSEAPRDSPSPTEPPK 619
TP P E P++ P P EP K
Sbjct: 38 TPKPKEVPKELPKPAEPSK 56
Score = 27.9 bits (59), Expect = 7.0
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -1
Query: 675 TPPPSEAPRDSPSPTEPPK 619
T P +AP++ P P +PPK
Sbjct: 120 TLKPKDAPKEPPKPADPPK 138
>Z70780-13|CAD18872.2| 368|Caenorhabditis elegans Hypothetical
protein F46B6.3b protein.
Length = 368
Score = 28.3 bits (60), Expect = 5.3
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = -1
Query: 654 PRDSPSP--TEPPKLNLQMTAAEMRAHLAAKKKFDPKKVPMDLRSKFDIVKKL 502
PRD +PP+ + T E + KK DPK PM + + KL
Sbjct: 280 PRDKKKERLAKPPRPSPAKTVGEQQGEDWIKKLTDPKSAPMKKKHDLSVTTKL 332
>Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical
protein C15C6.3 protein.
Length = 541
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -1
Query: 672 PPPSEAPRDSPSPTEPPKLNLQMTAAEMRAHLAAKKK 562
PPP P + P P PP ++++ T +++ L + K
Sbjct: 482 PPPENEPEEFPPP--PPSISIRETKKQLKMRLKSINK 516
>Z83233-8|CAB05759.2| 378|Caenorhabditis elegans Hypothetical
protein K06B4.8 protein.
Length = 378
Score = 27.5 bits (58), Expect = 9.3
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = -3
Query: 511 EETVMVRDECAVCIDSAV 458
EE+V+VR++C +C SA+
Sbjct: 13 EESVLVREKCVICFGSAL 30
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +2
Query: 614 FSLGGSVGDGLSRGASLGGG 673
+S GGS G G S G S GGG
Sbjct: 173 YSSGGSSGGGYSSGGSSGGG 192
>Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical
protein F58G6.1 protein.
Length = 461
Score = 27.5 bits (58), Expect = 9.3
Identities = 14/53 (26%), Positives = 22/53 (41%)
Frame = -1
Query: 675 TPPPSEAPRDSPSPTEPPKLNLQMTAAEMRAHLAAKKKFDPKKVPMDLRSKFD 517
TP PS P P+P P+ ++ A + D + P D+ KF+
Sbjct: 278 TPSPSVLPSPVPAPMAKPRESVVSMANSTNPFDDDDAEHDKEATPTDVEEKFE 330
>AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15a protein.
Length = 933
Score = 27.5 bits (58), Expect = 9.3
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = -1
Query: 672 PPPSEAPRDSPSPTEPPKLNLQMTAAEMRAHLAAKKKFDPKKVPM 538
P P AP P P PP L Q + LAA K PM
Sbjct: 783 PSPLTAPIPPPPPPPPPMLPPQQSQLAQSLQLAATSSNVVKVAPM 827
>AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15b protein.
Length = 832
Score = 27.5 bits (58), Expect = 9.3
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = -1
Query: 672 PPPSEAPRDSPSPTEPPKLNLQMTAAEMRAHLAAKKKFDPKKVPM 538
P P AP P P PP L Q + LAA K PM
Sbjct: 682 PSPLTAPIPPPPPPPPPMLPPQQSQLAQSLQLAATSSNVVKVAPM 726
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,826,799
Number of Sequences: 27780
Number of extensions: 268074
Number of successful extensions: 1249
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1239
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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