Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_N03
(642 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protei... 206 7e-53
BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a ... 206 7e-53
BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a ... 206 7e-53
BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a ... 206 7e-53
BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a ... 206 7e-53
BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein. 206 7e-53
BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a ... 206 7e-53
BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a ... 206 7e-53
BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a ... 206 7e-53
AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a ... 206 7e-53
AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a ... 204 3e-52
AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA seq... 196 6e-50
BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein. 117 3e-26
AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a ... 117 3e-26
BC067891-1|AAH67891.1| 102|Homo sapiens Unknown (protein for MG... 52 2e-06
AB011181-1|BAA25535.3| 769|Homo sapiens KIAA0609 protein protein. 31 4.6
>X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protein
protein.
Length = 203
Score = 206 bits (502), Expect = 7e-53
Identities = 90/144 (62%), Positives = 114/144 (79%)
Frame = -3
Query: 583 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 404
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 403 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 224
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 223 XVFCLKPGRNYCHVGRLSHEIGWK 152
V LKP R + ++GRL+HE+GWK
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWK 148
>BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 206 bits (502), Expect = 7e-53
Identities = 90/144 (62%), Positives = 114/144 (79%)
Frame = -3
Query: 583 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 404
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 403 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 224
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 223 XVFCLKPGRNYCHVGRLSHEIGWK 152
V LKP R + ++GRL+HE+GWK
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWK 148
>BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 206 bits (502), Expect = 7e-53
Identities = 90/144 (62%), Positives = 114/144 (79%)
Frame = -3
Query: 583 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 404
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 403 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 224
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 223 XVFCLKPGRNYCHVGRLSHEIGWK 152
V LKP R + ++GRL+HE+GWK
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWK 148
>BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 206 bits (502), Expect = 7e-53
Identities = 90/144 (62%), Positives = 114/144 (79%)
Frame = -3
Query: 583 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 404
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 403 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 224
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 223 XVFCLKPGRNYCHVGRLSHEIGWK 152
V LKP R + ++GRL+HE+GWK
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWK 148
>BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 206 bits (502), Expect = 7e-53
Identities = 90/144 (62%), Positives = 114/144 (79%)
Frame = -3
Query: 583 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 404
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 403 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 224
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 223 XVFCLKPGRNYCHVGRLSHEIGWK 152
V LKP R + ++GRL+HE+GWK
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWK 148
>BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein.
Length = 201
Score = 206 bits (502), Expect = 7e-53
Identities = 90/144 (62%), Positives = 114/144 (79%)
Frame = -3
Query: 583 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 404
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 3 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 62
Query: 403 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 224
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 63 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 122
Query: 223 XVFCLKPGRNYCHVGRLSHEIGWK 152
V LKP R + ++GRL+HE+GWK
Sbjct: 123 KVVRLKPTRKFAYLGRLAHEVGWK 146
>BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 206 bits (502), Expect = 7e-53
Identities = 90/144 (62%), Positives = 114/144 (79%)
Frame = -3
Query: 583 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 404
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 403 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 224
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 223 XVFCLKPGRNYCHVGRLSHEIGWK 152
V LKP R + ++GRL+HE+GWK
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWK 148
>BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 206 bits (502), Expect = 7e-53
Identities = 90/144 (62%), Positives = 114/144 (79%)
Frame = -3
Query: 583 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 404
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 403 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 224
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 223 XVFCLKPGRNYCHVGRLSHEIGWK 152
V LKP R + ++GRL+HE+GWK
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWK 148
>BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 206 bits (502), Expect = 7e-53
Identities = 90/144 (62%), Positives = 114/144 (79%)
Frame = -3
Query: 583 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 404
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 403 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 224
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 223 XVFCLKPGRNYCHVGRLSHEIGWK 152
V LKP R + ++GRL+HE+GWK
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWK 148
>AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 206 bits (502), Expect = 7e-53
Identities = 90/144 (62%), Positives = 114/144 (79%)
Frame = -3
Query: 583 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 404
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 403 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 224
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 223 XVFCLKPGRNYCHVGRLSHEIGWK 152
V LKP R + ++GRL+HE+GWK
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWK 148
>AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a
variant protein.
Length = 203
Score = 204 bits (497), Expect = 3e-52
Identities = 89/144 (61%), Positives = 113/144 (78%)
Frame = -3
Query: 583 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 404
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 403 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 224
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL L+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDHLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 223 XVFCLKPGRNYCHVGRLSHEIGWK 152
V LKP R + ++GRL+HE+GWK
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWK 148
>AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA
sequence from clone RP11-365K22 on chromosome 13
Contains a novel gene similar to ribosomal protein L13a
(RPL13A). ).
Length = 203
Score = 196 bits (478), Expect = 6e-50
Identities = 86/144 (59%), Positives = 111/144 (77%)
Frame = -3
Query: 583 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 404
+ +V+DGRGHLLGRLAA++AK +L G KVVVV CE INISGNF+RNKL ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVCCEGINISGNFYRNKLNYLAFLRKRMNT 64
Query: 403 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 224
+P+RGP+HFRAPS++ W+TVRGM+PHKT+RG+ AL RL+ DG PPP+D
Sbjct: 65 SPSRGPYHFRAPSRVFWRTVRGMLPHKTKRGQAALDRLKVSDGIPPPYDKKKRMVVPAAL 124
Query: 223 XVFCLKPGRNYCHVGRLSHEIGWK 152
V LKP R + ++GRL+HE+GWK
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWK 148
>BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein.
Length = 142
Score = 117 bits (282), Expect = 3e-26
Identities = 48/86 (55%), Positives = 63/86 (73%)
Frame = -3
Query: 409 NVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXX 230
N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 2 NTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPA 61
Query: 229 XXXVFCLKPGRNYCHVGRLSHEIGWK 152
V LKP R + ++GRL+HE+GWK
Sbjct: 62 ALKVVRLKPTRKFAYLGRLAHEVGWK 87
Score = 31.1 bits (67), Expect = 3.5
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = -1
Query: 141 VVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSKATTPFT 16
V LEDKRK KA +K+L R+ K A + V K +T
Sbjct: 91 VTATLEDKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYT 132
>AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a
protein.
Length = 142
Score = 117 bits (282), Expect = 3e-26
Identities = 48/86 (55%), Positives = 63/86 (73%)
Frame = -3
Query: 409 NVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXX 230
N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 2 NTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPA 61
Query: 229 XXXVFCLKPGRNYCHVGRLSHEIGWK 152
V LKP R + ++GRL+HE+GWK
Sbjct: 62 ALKVVRLKPTRKFAYLGRLAHEVGWK 87
>BC067891-1|AAH67891.1| 102|Homo sapiens Unknown (protein for
MGC:87657) protein.
Length = 102
Score = 52.0 bits (119), Expect = 2e-06
Identities = 24/62 (38%), Positives = 34/62 (54%)
Frame = -3
Query: 337 MIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXVFCLKPGRNYCHVGRLSHEIG 158
M+ HKT+RG +L L+ +DG PPP+D V LKP R + +GR + E+
Sbjct: 1 MLRHKTKRGHASLDCLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFALLGRQAQEVR 60
Query: 157 WK 152
WK
Sbjct: 61 WK 62
>AB011181-1|BAA25535.3| 769|Homo sapiens KIAA0609 protein protein.
Length = 769
Score = 30.7 bits (66), Expect = 4.6
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -1
Query: 546 AVWRQSSPRSFSKGTKLLWFAANKSISLATSLGTNSSLCHSCVRGAT*ILLVDLSIL 376
+ WRQS PR + +G + L A ++ +L + T+ + C RG L LS+L
Sbjct: 30 SAWRQSRPREYYEGGRGL-HAPDRETALGLGIATSERMLGIC-RGRRKFLAASLSLL 84
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,411,979
Number of Sequences: 237096
Number of extensions: 2084734
Number of successful extensions: 15194
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 15069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15194
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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