Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_N01
         (869 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7TA68 Cluster: Predicted protein; n=6; Eumetazoa|Rep: ...    35   3.1  
UniRef50_Q8I5I2 Cluster: Putative uncharacterized protein; n=3; ...    33   7.1  

>UniRef50_A7TA68 Cluster: Predicted protein; n=6; Eumetazoa|Rep:
           Predicted protein - Nematostella vectensis
          Length = 132

 Score = 34.7 bits (76), Expect = 3.1
 Identities = 20/87 (22%), Positives = 48/87 (55%)
 Frame = -1

Query: 296 ILYFHNQLNIGVVTNHWIPLHPLNVFQRYLFTYLLNRATFVHIYVKVVEQFIFNHLNVIH 117
           +LY H  +N+ +  +  + +  L++    L+ Y+     ++HI V V+  +++  +NV+ 
Sbjct: 26  VLYLHISVNV-LYLHISVNVLYLHISVNVLYLYISVNVLYLHISVNVL--YLYISVNVL- 81

Query: 116 *RYCYIPLVLIQLFLRVGQLFMYVLIS 36
             Y YI + ++ L + V  L++Y+ ++
Sbjct: 82  --YLYISVNVLYLHINVNVLYLYISVN 106


>UniRef50_Q8I5I2 Cluster: Putative uncharacterized protein; n=3;
            Plasmodium|Rep: Putative uncharacterized protein -
            Plasmodium falciparum (isolate 3D7)
          Length = 4494

 Score = 33.5 bits (73), Expect = 7.1
 Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
 Frame = -3

Query: 774  MYXINVPFTM*SLDY----FKIFHLEMLK*INKGLDFKKKKPNIFICNGNSNNSAIFEYR 607
            ++ IN    + SLD      +IF+LE  K INK  D+ K   + +ICN N  N+A  EY 
Sbjct: 3472 LHAINTLHNVISLDNPRNEIEIFNLE--KCINKENDYIKD--DTYICNQNDKNNASTEYN 3527

Query: 606  ENNSKE-MI*CRFLRKFK 556
               +K     C  ++K+K
Sbjct: 3528 SEKAKHPKKNCILIKKYK 3545


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 759,706,640
Number of Sequences: 1657284
Number of extensions: 14958212
Number of successful extensions: 29882
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 28026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29854
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 77472727479
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)