Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_M24
         (721 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    29   0.038
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   2.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.5  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    23   3.3  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   3.3  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   5.8  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 29.1 bits (62), Expect = 0.038
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +1

Query: 208 IANRLKGTLRSRGAVFISTLSLDYLLKRQIHAQKMSIVSRL 330
           +AN+  G L     V I T+ + Y  KR+I  Q  S +SRL
Sbjct: 12  VANKFSGKLWPISIVLIYTVGVVYSFKRRIFYQDESPISRL 52



 Score = 21.8 bits (44), Expect = 5.8
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -3

Query: 524 KKLSLFLFVSVSGT*SFLD*FFFKRNSIFMLSDV*Y 417
           +K +LF F    G   FL   F +  S+  LSD+ Y
Sbjct: 183 QKTTLFFFNRTFGVPIFLVLVFVQMQSVQDLSDIFY 218


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 484 LSPFWINFFLNEILFLCCRMCN 419
           L  FW  FF+  +L++C +  N
Sbjct: 271 LLTFWSAFFIVNVLYICNQCYN 292


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +3

Query: 315 YCFSLTF*AQLRFTLAAPCITKH 383
           YC S+TF   L F L +   T H
Sbjct: 60  YCVSITFNVHLLFLLCSGYFTVH 82


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +1

Query: 352 LPSRHPVLQNIIIDYYNVINPKYYTSD 432
           LPS      N ++D+ N+++  Y+T+D
Sbjct: 182 LPSYDIPEINKVVDFINIMSYDYHTAD 208


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 583 IINAQSKYRFQLKDCAKFCXEI 648
           +IN Q   R   K+CA F  E+
Sbjct: 197 LINEQMAVRINPKNCASFVIEV 218


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 675 HLTSIFCCINFXTELSTVF 619
           HL++I  C+N+   +ST F
Sbjct: 322 HLSNIEDCLNYVPHISTGF 340


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,224
Number of Sequences: 336
Number of extensions: 2943
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)