Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_M23
         (502 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6X8H4 Cluster: Putative uncharacterized protein; n=1; ...    35   0.90 
UniRef50_A2Q1T0 Cluster: Putative uncharacterized protein; n=1; ...    33   4.8  
UniRef50_Q4GYE3 Cluster: Putative uncharacterized protein; n=1; ...    32   8.3  

>UniRef50_A6X8H4 Cluster: Putative uncharacterized protein; n=1;
           Ochrobactrum anthropi ATCC 49188|Rep: Putative
           uncharacterized protein - Ochrobactrum anthropi (strain
           ATCC 49188 / DSM 6882 / NCTC 12168)
          Length = 1112

 Score = 35.1 bits (77), Expect = 0.90
 Identities = 15/37 (40%), Positives = 25/37 (67%)
 Frame = -2

Query: 216 PPSTTTVDTLDLRQML*YIFLINSGDAPQFSESCIFY 106
           PPS  TVD  D  Q++ ++F + S +APQ ++S ++Y
Sbjct: 752 PPSGQTVDPTDNSQIITFVFRLLSNNAPQQNQSILWY 788


>UniRef50_A2Q1T0 Cluster: Putative uncharacterized protein; n=1;
           Medicago truncatula|Rep: Putative uncharacterized
           protein - Medicago truncatula (Barrel medic)
          Length = 469

 Score = 32.7 bits (71), Expect = 4.8
 Identities = 18/51 (35%), Positives = 30/51 (58%)
 Frame = -2

Query: 450 DKTVSWSRSSTNVSIYYNIV*FIVSEYYC*LNRLTLFVENLVPTNLIKQIN 298
           D  +S+ RSS+ + +Y N   FI  +YY  L  L  FV+N+ P N++  ++
Sbjct: 292 DPIISYLRSSSQLKVYMNF--FI--DYYHHLCNLREFVQNIKPQNVLSSLS 338


>UniRef50_Q4GYE3 Cluster: Putative uncharacterized protein; n=1;
           Trypanosoma brucei|Rep: Putative uncharacterized protein
           - Trypanosoma brucei
          Length = 128

 Score = 31.9 bits (69), Expect = 8.3
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = -3

Query: 272 YIYK*MCECECECVSLCASRPQLRQ*ILWISDKCCSIYF-*LIRVMRLSFQNHVFF 108
           YI   +C C C CV +C  RP     I +    CCS +F     ++R  F + +F+
Sbjct: 2   YICFCLCLCLCLCVYMCNHRP-----IFFFVHPCCSFHFSPPFALLRFRFLSFIFY 52


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 407,705,318
Number of Sequences: 1657284
Number of extensions: 6758957
Number of successful extensions: 11793
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10981
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11740
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29691847201
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)