Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_M23
         (502 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   2.0  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   4.7  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   4.7  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   8.2  

>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 4/35 (11%)
 Frame = +1

Query: 382 YKSYYIIINRDVSRRARPRHC--FILKF--LQRLL 474
           +K  Y +IN  ++ R  P++C  F+++   L RLL
Sbjct: 191 FKQRYQLINEQMAVRINPKNCASFVIEVRKLSRLL 225


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = -2

Query: 423 STNVSIYYNIV*FIVSEYYC*LNRLTLFVENLV 325
           +TN+ I    V ++V+ + C + +  +FVE L+
Sbjct: 351 TTNIIILGLNVVYVVTAWICAITKRDMFVEFLL 383


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = -2

Query: 423 STNVSIYYNIV*FIVSEYYC*LNRLTLFVENLV 325
           +TN+ I    V ++V+ + C + +  +FVE L+
Sbjct: 76  TTNIIILGLNVVYVVTAWICAITKRDMFVEFLL 108


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 5/15 (33%), Positives = 12/15 (80%)
 Frame = +2

Query: 167 YNICLRSRVSTVVVE 211
           YN+C R R ++++++
Sbjct: 401 YNVCFRPRNNSILIK 415


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,598
Number of Sequences: 336
Number of extensions: 1910
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11839801
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)