Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_M22
         (736 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q16RN6 Cluster: Adp,atp carrier protein; n=1; Aedes aeg...    43   0.007
UniRef50_P12236 Cluster: ADP/ATP translocase 3; n=11; Euteleosto...    39   0.11 
UniRef50_P05141 Cluster: ADP/ATP translocase 2; n=61; Eukaryota|...    38   0.34 
UniRef50_P12235 Cluster: ADP/ATP translocase 1; n=108; Eukaryota...    38   0.34 
UniRef50_Q9H0C2 Cluster: ADP/ATP translocase 4; n=17; Eukaryota|...    34   3.1  
UniRef50_O81454 Cluster: T27D20.2 protein; n=17; Magnoliophyta|R...    33   5.5  
UniRef50_O94254 Cluster: Meiotically up-regulated gene 45 protei...    33   7.3  

>UniRef50_Q16RN6 Cluster: Adp,atp carrier protein; n=1; Aedes
           aegypti|Rep: Adp,atp carrier protein - Aedes aegypti
           (Yellowfever mosquito)
          Length = 257

 Score = 43.2 bits (97), Expect = 0.007
 Identities = 20/21 (95%), Positives = 20/21 (95%)
 Frame = -3

Query: 734 VLRGTGGAFVLXLYDEIKKVL 672
           VLRGTGGAFVL LYDEIKKVL
Sbjct: 237 VLRGTGGAFVLVLYDEIKKVL 257


>UniRef50_P12236 Cluster: ADP/ATP translocase 3; n=11;
           Euteleostomi|Rep: ADP/ATP translocase 3 - Homo sapiens
           (Human)
          Length = 298

 Score = 39.1 bits (87), Expect = 0.11
 Identities = 17/21 (80%), Positives = 19/21 (90%)
 Frame = -3

Query: 734 VLRGTGGAFVLXLYDEIKKVL 672
           VLRG GGAFVL LYDE+KKV+
Sbjct: 278 VLRGMGGAFVLVLYDELKKVI 298


>UniRef50_P05141 Cluster: ADP/ATP translocase 2; n=61;
           Eukaryota|Rep: ADP/ATP translocase 2 - Homo sapiens
           (Human)
          Length = 298

 Score = 37.5 bits (83), Expect = 0.34
 Identities = 17/19 (89%), Positives = 17/19 (89%)
 Frame = -3

Query: 734 VLRGTGGAFVLXLYDEIKK 678
           VLRG GGAFVL LYDEIKK
Sbjct: 278 VLRGMGGAFVLVLYDEIKK 296


>UniRef50_P12235 Cluster: ADP/ATP translocase 1; n=108;
           Eukaryota|Rep: ADP/ATP translocase 1 - Homo sapiens
           (Human)
          Length = 298

 Score = 37.5 bits (83), Expect = 0.34
 Identities = 17/19 (89%), Positives = 17/19 (89%)
 Frame = -3

Query: 734 VLRGTGGAFVLXLYDEIKK 678
           VLRG GGAFVL LYDEIKK
Sbjct: 278 VLRGMGGAFVLVLYDEIKK 296


>UniRef50_Q9H0C2 Cluster: ADP/ATP translocase 4; n=17;
           Eukaryota|Rep: ADP/ATP translocase 4 - Homo sapiens
           (Human)
          Length = 315

 Score = 34.3 bits (75), Expect = 3.1
 Identities = 15/19 (78%), Positives = 17/19 (89%)
 Frame = -3

Query: 734 VLRGTGGAFVLXLYDEIKK 678
           VLRGTGGA VL LYD+IK+
Sbjct: 288 VLRGTGGALVLVLYDKIKE 306


>UniRef50_O81454 Cluster: T27D20.2 protein; n=17; Magnoliophyta|Rep:
           T27D20.2 protein - Arabidopsis thaliana (Mouse-ear
           cress)
          Length = 315

 Score = 33.5 bits (73), Expect = 5.5
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = +2

Query: 371 CHIKKTNHFSF*INNRLYNMKVIEMSKLENFQ 466
           CH ++TNH+SF  N+R YN+  +   ++ + Q
Sbjct: 19  CHNRRTNHYSFTYNDRKYNLAPLSPLEVHDLQ 50


>UniRef50_O94254 Cluster: Meiotically up-regulated gene 45 protein;
           n=1; Schizosaccharomyces pombe|Rep: Meiotically
           up-regulated gene 45 protein - Schizosaccharomyces pombe
           (Fission yeast)
          Length = 819

 Score = 33.1 bits (72), Expect = 7.3
 Identities = 25/86 (29%), Positives = 42/86 (48%)
 Frame = -3

Query: 440 QLLSYYIIYC*FKMKND*FFLCDIT*FGLRLLCN*PHFSLVPEAKAELKIVQNFILKEVF 261
           QLL YY IY  FK+  D   L +     ++ + +  HF L+ +    L+I  N+  +E F
Sbjct: 550 QLLEYYDIYLKFKLLADWRLLTNPV-LQIQEISDYCHFKLLKKVNRNLQIKTNYPTQE-F 607

Query: 260 NVLSILNLSFVGIENFHFFLHSGSEF 183
           ++L    +  + I    +FLH  S +
Sbjct: 608 HLLR-PTIKILQISKHEYFLHFSSSY 632


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 627,132,073
Number of Sequences: 1657284
Number of extensions: 11330448
Number of successful extensions: 18831
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 18280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18829
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59677054775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)