Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_M22
         (736 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82059-6|CAB04874.1|  300|Caenorhabditis elegans Hypothetical pr...    35   0.069
X76112-1|CAA53718.1|  300|Caenorhabditis elegans ADP/ATP translo...    35   0.069
Z68218-2|CAA92472.1|  313|Caenorhabditis elegans Hypothetical pr...    34   0.12 
U80931-5|AAB38001.1|  313|Caenorhabditis elegans Hypothetical pr...    34   0.12 
AF003141-4|AAK21485.1|  300|Caenorhabditis elegans Hypothetical ...    30   2.0  
Z81146-7|CAB03523.2|  517|Caenorhabditis elegans Hypothetical pr...    29   4.5  
U64842-4|AAB37086.2|  306|Caenorhabditis elegans Hypothetical pr...    28   7.9  
U53340-4|AAA96209.2|  445|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>Z82059-6|CAB04874.1|  300|Caenorhabditis elegans Hypothetical
           protein T27E9.1a protein.
          Length = 300

 Score = 34.7 bits (76), Expect = 0.069
 Identities = 15/21 (71%), Positives = 17/21 (80%)
 Frame = -3

Query: 734 VLRGTGGAFVLXLYDEIKKVL 672
           V RGTGGA VL +YDEI+K L
Sbjct: 280 VFRGTGGALVLAIYDEIQKFL 300


>X76112-1|CAA53718.1|  300|Caenorhabditis elegans ADP/ATP
           translocase protein.
          Length = 300

 Score = 34.7 bits (76), Expect = 0.069
 Identities = 15/21 (71%), Positives = 17/21 (80%)
 Frame = -3

Query: 734 VLRGTGGAFVLXLYDEIKKVL 672
           V RGTGGA VL +YDEI+K L
Sbjct: 280 VFRGTGGALVLAIYDEIQKFL 300


>Z68218-2|CAA92472.1|  313|Caenorhabditis elegans Hypothetical
           protein K01H12.2 protein.
          Length = 313

 Score = 33.9 bits (74), Expect = 0.12
 Identities = 14/21 (66%), Positives = 17/21 (80%)
 Frame = -3

Query: 734 VLRGTGGAFVLXLYDEIKKVL 672
           V RGTGGA VL +YDEI+K +
Sbjct: 293 VFRGTGGALVLAIYDEIQKFI 313


>U80931-5|AAB38001.1|  313|Caenorhabditis elegans Hypothetical
           protein T01B11.4 protein.
          Length = 313

 Score = 33.9 bits (74), Expect = 0.12
 Identities = 14/21 (66%), Positives = 17/21 (80%)
 Frame = -3

Query: 734 VLRGTGGAFVLXLYDEIKKVL 672
           V RGTGGA VL +YDEI+K +
Sbjct: 293 VFRGTGGALVLAIYDEIQKFI 313


>AF003141-4|AAK21485.1|  300|Caenorhabditis elegans Hypothetical
           protein W02D3.6 protein.
          Length = 300

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = -3

Query: 734 VLRGTGGAFVLXLYDEIKKVL 672
           V R TGGA VL +YDEI+ ++
Sbjct: 280 VFRATGGALVLTIYDEIQHLI 300


>Z81146-7|CAB03523.2|  517|Caenorhabditis elegans Hypothetical
           protein K10D11.4 protein.
          Length = 517

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = -3

Query: 329 FSLVPEAKAELKIVQNFILKEVFNVLSILNLSFVGIENFHFFLHSG 192
           FS+VP       IVQ+  + E  + +S LNL+  G+E  H    SG
Sbjct: 253 FSIVPIPSHHHVIVQDASMYENISQISSLNLNEFGVEVVHLNASSG 298


>U64842-4|AAB37086.2|  306|Caenorhabditis elegans Hypothetical
           protein F25B4.7 protein.
          Length = 306

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = -3

Query: 731 LRGTGGAFVLXLYDEIKKVL 672
           +RGTG A VL +Y+E++K +
Sbjct: 287 IRGTGAALVLAIYNELQKYM 306


>U53340-4|AAA96209.2|  445|Caenorhabditis elegans Hypothetical
           protein F02E8.2a protein.
          Length = 445

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -3

Query: 467 FENFLILTSQLLSYYIIYC*FKMKND*FFLC 375
           FE+ + +T  L  ++IIYC F++     FLC
Sbjct: 249 FESAITITFVLPLFFIIYCYFRILGTRHFLC 279


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,035,739
Number of Sequences: 27780
Number of extensions: 295303
Number of successful extensions: 488
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 488
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)