Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_M21
         (673 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46793-4|CAA86773.1|  889|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z34800-5|CAA84325.1|  889|Caenorhabditis elegans Hypothetical pr...    29   3.0  
U80842-18|AAU20826.1|  132|Caenorhabditis elegans Hypothetical p...    29   3.0  
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p...    28   6.9  
AF100669-1|AAK39265.1|  931|Caenorhabditis elegans Hypothetical ...    27   9.2  

>Z46793-4|CAA86773.1|  889|Caenorhabditis elegans Hypothetical
           protein F45H7.6 protein.
          Length = 889

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
 Frame = +3

Query: 315 MNFLHFKGSHGLKQSWHELARCVHSNIMDNGFLI-*ELHRKSDYDIEESLGISQSLFHID 491
           +NF HF  S+ L+ ++ +     HS++++  F I  +  +KS  DI E    SQ+    +
Sbjct: 175 LNFDHFIASNQLQNNYIQSKSFSHSHVVEIVFSIEPKTSKKSAPDIMEIASSSQT--PPE 232

Query: 492 S*LNRFINQKAFETFVNHI 548
           S    +++ K  + +VNH+
Sbjct: 233 SHWKTYLDAKKRKFYVNHV 251


>Z34800-5|CAA84325.1|  889|Caenorhabditis elegans Hypothetical
           protein F45H7.6 protein.
          Length = 889

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
 Frame = +3

Query: 315 MNFLHFKGSHGLKQSWHELARCVHSNIMDNGFLI-*ELHRKSDYDIEESLGISQSLFHID 491
           +NF HF  S+ L+ ++ +     HS++++  F I  +  +KS  DI E    SQ+    +
Sbjct: 175 LNFDHFIASNQLQNNYIQSKSFSHSHVVEIVFSIEPKTSKKSAPDIMEIASSSQT--PPE 232

Query: 492 S*LNRFINQKAFETFVNHI 548
           S    +++ K  + +VNH+
Sbjct: 233 SHWKTYLDAKKRKFYVNHV 251


>U80842-18|AAU20826.1|  132|Caenorhabditis elegans Hypothetical
           protein ZC239.17 protein.
          Length = 132

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 8/21 (38%), Positives = 17/21 (80%)
 Frame = +3

Query: 249 LYGIVFLIYINYLPTLKSCFV 311
           ++ ++FL+++ Y+P LKS F+
Sbjct: 102 VFSLIFLVFVYYIPALKSYFI 122


>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
            protein C47D12.1c protein.
          Length = 4053

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 15/59 (25%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
 Frame = +2

Query: 140  IKLIHLYINKLIRSKFLRYLYNINIPTKCIIDFFSLIIWYC---LSYL-HKLPTYIEVL 304
            ++ ++ YI++ +   F   L N++ P   ++  FSL+   C    +YL H +P++++V+
Sbjct: 2344 LEQLNQYISRFLHEHFGSLLKNLSGPVLGVLGAFSLLRTICGHEPAYLDHLMPSFVKVM 2402


>AF100669-1|AAK39265.1|  931|Caenorhabditis elegans Hypothetical
           protein R11E3.3 protein.
          Length = 931

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 137 GIKLIHLYINKLIRSKFLRYLYNINIPTKCIID 235
           GI  IH+    +    FL YLYN+++ T  I D
Sbjct: 350 GIAQIHIRKLPMCGYSFLAYLYNVSLSTNIIPD 382


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,580,589
Number of Sequences: 27780
Number of extensions: 273639
Number of successful extensions: 504
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 504
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)