Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_M21
(673 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 25 0.50
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 25 0.87
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 23 2.0
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 23 2.0
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 23 2.0
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 23 2.0
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 23 2.0
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 23 2.0
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 23 2.0
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 23 2.0
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 23 2.6
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 23 2.6
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 23 2.6
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 23 2.6
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 23 2.6
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 23 3.5
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 23 3.5
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 23 3.5
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 23 3.5
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 22 6.1
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 22 6.1
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 22 6.1
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 22 6.1
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 22 6.1
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 22 6.1
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 21 8.1
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 21 8.1
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 21 8.1
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 21 8.1
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 21 8.1
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 25.4 bits (53), Expect = 0.50
Identities = 16/69 (23%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Frame = +2
Query: 137 GIKLIHLYINKLIRSKFLRYL-----YNINIPTKCIIDFFSLIIWYCLSYLHKLPTYIEV 301
G+K++H+ + + R + Y Y + + TK + + L++W + ++K I+V
Sbjct: 99 GVKMLHVPSDHIWRPDIVLYNNADGNYEVTLMTKATVYYSGLVVWQPPA-VYKSSCSIDV 157
Query: 302 LFC*YEFPT 328
F Y+ T
Sbjct: 158 EFFPYDVQT 166
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 24.6 bits (51), Expect = 0.87
Identities = 9/34 (26%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 251 IWYCLSYLHKLPTYIEV-LFC*YEFPTFQRKPWL 349
++Y ++Y+ ++P + V ++C FP +PW+
Sbjct: 351 LYYNINYIEQIPVPVPVPIYC-GNFPPRSMEPWI 383
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/34 (26%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 251 IWYCLSYLHKLPTYIEV-LFC*YEFPTFQRKPWL 349
++Y ++Y+ ++P + V ++C FP+ PW+
Sbjct: 109 LYYNINYIEQIPVPVPVPIYC-GNFPSRPMGPWV 141
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/34 (26%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 251 IWYCLSYLHKLPTYIEV-LFC*YEFPTFQRKPWL 349
++Y ++Y+ ++P + V ++C FP+ PW+
Sbjct: 109 LYYNINYIEQIPVPVPVPIYC-GNFPSRPMGPWV 141
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/34 (26%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 251 IWYCLSYLHKLPTYIEV-LFC*YEFPTFQRKPWL 349
++Y ++Y+ ++P + V ++C FP+ PW+
Sbjct: 109 LYYNINYIEQIPVPVPVPIYC-GNFPSRPMGPWV 141
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/34 (26%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 251 IWYCLSYLHKLPTYIEV-LFC*YEFPTFQRKPWL 349
++Y ++Y+ ++P + V ++C FP+ PW+
Sbjct: 109 LYYNINYIEQIPVPVPVPIYC-GNFPSRPMGPWV 141
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/34 (26%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 251 IWYCLSYLHKLPTYIEV-LFC*YEFPTFQRKPWL 349
++Y ++Y+ ++P + V ++C FP+ PW+
Sbjct: 109 LYYNINYIEQIPVPVPVPIYC-GNFPSRPMGPWV 141
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/34 (26%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 251 IWYCLSYLHKLPTYIEV-LFC*YEFPTFQRKPWL 349
++Y ++Y+ ++P + V ++C FP+ PW+
Sbjct: 109 LYYNINYIEQIPVPVPVPIYC-GNFPSRPMGPWV 141
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/34 (26%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 251 IWYCLSYLHKLPTYIEV-LFC*YEFPTFQRKPWL 349
++Y ++Y+ ++P + V ++C FP+ PW+
Sbjct: 109 LYYNINYIEQIPVPVPVPIYC-GNFPSRPMGPWV 141
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/34 (26%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 251 IWYCLSYLHKLPTYIEV-LFC*YEFPTFQRKPWL 349
++Y ++Y+ ++P + V ++C FP+ PW+
Sbjct: 112 LYYNINYIEQIPVPVPVPIYC-GNFPSRPMGPWV 144
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 23.0 bits (47), Expect = 2.6
Identities = 9/34 (26%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 251 IWYCLSYLHKLPTYIEV-LFC*YEFPTFQRKPWL 349
++Y ++Y+ ++P + V ++C FP PW+
Sbjct: 106 LYYNINYIEQIPVPVPVPIYC-GNFPPRPMGPWI 138
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 23.0 bits (47), Expect = 2.6
Identities = 9/34 (26%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 251 IWYCLSYLHKLPTYIEV-LFC*YEFPTFQRKPWL 349
++Y ++Y+ ++P + V ++C FP PW+
Sbjct: 106 LYYNINYIEQIPVPVPVPIYC-GNFPPRPMGPWI 138
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.6
Identities = 10/34 (29%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 251 IWYCLSYLHKLPTYIEV-LFC*YEFPTFQRKPWL 349
++Y ++Y+ ++P I V ++C FP PW+
Sbjct: 107 LYYNINYIEQVPVPIPVPIYC-GNFPPRPMGPWI 139
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 23.0 bits (47), Expect = 2.6
Identities = 9/34 (26%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 251 IWYCLSYLHKLPTYIEV-LFC*YEFPTFQRKPWL 349
++Y ++Y+ ++P + V ++C FP PW+
Sbjct: 117 LYYNINYIEQIPVPVPVPIYC-GNFPPRPMGPWI 149
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 23.0 bits (47), Expect = 2.6
Identities = 9/34 (26%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 251 IWYCLSYLHKLPTYIEV-LFC*YEFPTFQRKPWL 349
++Y ++Y+ ++P + V ++C FP PW+
Sbjct: 344 LYYNINYIEQIPVPVPVPIYC-GNFPPRPMGPWI 376
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.6 bits (46), Expect = 3.5
Identities = 9/34 (26%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 251 IWYCLSYLHKLPTYIEV-LFC*YEFPTFQRKPWL 349
++Y ++Y+ ++P + V ++C FP PW+
Sbjct: 108 LYYNINYIEQIPVPVPVPVYC-GNFPPRPMGPWI 140
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.6 bits (46), Expect = 3.5
Identities = 9/34 (26%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 251 IWYCLSYLHKLPTYIEV-LFC*YEFPTFQRKPWL 349
++Y ++Y+ ++P + V ++C FP PW+
Sbjct: 109 LYYNINYIEQIPIPVPVPIYC-GNFPPRPMGPWI 141
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.6 bits (46), Expect = 3.5
Identities = 9/34 (26%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 251 IWYCLSYLHKLPTYIEV-LFC*YEFPTFQRKPWL 349
++Y ++Y+ ++P + V ++C FP PW+
Sbjct: 326 LYYNINYIEQIPIPVPVPIYC-GNFPPRPMGPWI 358
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.6 bits (46), Expect = 3.5
Identities = 8/33 (24%), Positives = 17/33 (51%)
Frame = +2
Query: 251 IWYCLSYLHKLPTYIEVLFC*YEFPTFQRKPWL 349
++Y ++Y+ ++P + V FP PW+
Sbjct: 326 LYYNINYIEQIPVPVPVPIYYGNFPPRPMGPWI 358
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 21.8 bits (44), Expect = 6.1
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -2
Query: 672 MFVIYVYLRTMSSVRVH 622
+F+I Y R +SS+R H
Sbjct: 234 IFIILFYSRLLSSIRNH 250
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.8 bits (44), Expect = 6.1
Identities = 8/33 (24%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 254 WYCLSYLHKLPTYIEV-LFC*YEFPTFQRKPWL 349
+Y ++Y+ ++P + + ++C FP PW+
Sbjct: 323 YYNINYIEQIPVPVPIPIYC-GNFPPRPMGPWI 354
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 6.1
Identities = 8/33 (24%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 254 WYCLSYLHKLPTYIEV-LFC*YEFPTFQRKPWL 349
+Y ++Y+ ++P + + ++C FP PW+
Sbjct: 334 YYNINYIEQIPVPVPIPIYC-GNFPPRPMGPWI 365
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 6.1
Identities = 8/33 (24%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 254 WYCLSYLHKLPTYIEV-LFC*YEFPTFQRKPWL 349
+Y ++Y+ ++P + + ++C FP PW+
Sbjct: 334 YYNINYIEQIPVPVPIPIYC-GNFPPRPMGPWI 365
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.8 bits (44), Expect = 6.1
Identities = 8/33 (24%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 254 WYCLSYLHKLPTYIEV-LFC*YEFPTFQRKPWL 349
+Y ++Y+ ++P + + ++C FP PW+
Sbjct: 323 YYNINYIEQIPVPVPIPIYC-GNFPPRPMGPWI 354
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 21.8 bits (44), Expect = 6.1
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -2
Query: 672 MFVIYVYLRTMSSVRVH 622
+F+I Y R +SS+R H
Sbjct: 234 IFIILFYSRLLSSIRNH 250
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 8.1
Identities = 9/33 (27%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 254 WYCLSYLHKLPTYIEV-LFC*YEFPTFQRKPWL 349
+Y ++Y+ ++P + V ++C FP PW+
Sbjct: 112 YYNINYIEQIPIPVPVPIYC-GNFPPRPLGPWI 143
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 8.1
Identities = 9/33 (27%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 254 WYCLSYLHKLPTYIEV-LFC*YEFPTFQRKPWL 349
+Y ++Y+ ++P + V ++C FP PW+
Sbjct: 112 YYNINYIEQIPIPVPVPIYC-GNFPPRPLGPWI 143
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 8.1
Identities = 9/33 (27%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 254 WYCLSYLHKLPTYIEV-LFC*YEFPTFQRKPWL 349
+Y ++Y+ ++P + V ++C FP PW+
Sbjct: 112 YYNINYIEQIPIPVPVPIYC-GNFPPRPLGPWI 143
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 8.1
Identities = 9/33 (27%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 254 WYCLSYLHKLPTYIEV-LFC*YEFPTFQRKPWL 349
+Y ++Y+ ++P + V ++C FP PW+
Sbjct: 112 YYNINYIEQIPIPVPVPIYC-GNFPPRPLGPWI 143
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 21.4 bits (43), Expect = 8.1
Identities = 10/37 (27%), Positives = 23/37 (62%)
Frame = -2
Query: 267 ERQYHIIKLKKSIIHFVGIFILYKYRKNLLLINLFIY 157
E++++ KLK + + G+ +LY +N+ L ++ +Y
Sbjct: 87 EQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLY 123
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,383
Number of Sequences: 438
Number of extensions: 3769
Number of successful extensions: 35
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20343105
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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