Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_M20
(670 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032626-8|CAA21528.1| 335|Caenorhabditis elegans Hypothetical ... 85 3e-17
AL032626-28|CAO82072.1| 337|Caenorhabditis elegans Hypothetical... 83 2e-16
Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical pr... 29 3.0
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 29 3.0
AF022971-4|AAG23982.2| 579|Caenorhabditis elegans Hypothetical ... 29 3.0
AB007815-1|BAA28351.1| 579|Caenorhabditis elegans matrix metall... 29 3.0
AF040652-7|AAB95017.1| 210|Caenorhabditis elegans Hypothetical ... 29 3.9
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 28 5.2
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 28 5.2
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 28 5.2
U41263-3|AAC24425.1| 361|Caenorhabditis elegans Hypothetical pr... 28 6.9
AF036688-2|AAY86223.1| 91|Caenorhabditis elegans Hypothetical ... 28 6.9
>AL032626-8|CAA21528.1| 335|Caenorhabditis elegans Hypothetical
protein Y37D8A.9a protein.
Length = 335
Score = 85.4 bits (202), Expect = 3e-17
Identities = 62/227 (27%), Positives = 110/227 (48%), Gaps = 33/227 (14%)
Frame = -2
Query: 654 DTPADSGSDQPKKKRGRLDLSIESEEQYLAKVEVKIKIPEELKVWLVDDWDVITRQQKLA 475
+ P D D P +G+ S+ A ++K+++P+ L+ L+DD+D++ R +
Sbjct: 94 EAPRDDRDDTPGTSKGKKAKSVTIAPVMTAD-DMKVELPKPLRKILIDDYDLVCRYF-IN 151
Query: 474 ILPAKLTVSQIVDNYLAFKKSSKSHNQAKESVLVDITE---------------GIKEYFN 340
I+P + +V QI+++Y+ S + + +L++ E G+ +YFN
Sbjct: 152 IVPHEYSVDQIIEDYIKTIPVSNEQMRTVDDLLIEYEEADIKITNLALICTARGLVDYFN 211
Query: 339 ATLGSQLLYKFERPQYSEI-----------------LQEYPDTPMSQVYGAVHLLRLFAK 211
TLG QLLYKFERPQY+++ LQ+ P SQ YG VH LR+ AK
Sbjct: 212 VTLGYQLLYKFERPQYNDLVKKRAMEKGIDITNPTALQDSGFRP-SQEYGIVHFLRMLAK 270
Query: 210 MGPMLAYTALDEKSLHHVLSHIQDFLKYMVTNRSTLF-NLQDYGNAN 73
+ L T ++ ++ ++ + D + ++ N + DY A+
Sbjct: 271 LPDYLKLTQWNDHVINRIMIGVHDLIVFLNKNHGKYYRGSSDYQGAS 317
>AL032626-28|CAO82072.1| 337|Caenorhabditis elegans Hypothetical
protein Y37D8A.9b protein.
Length = 337
Score = 82.6 bits (195), Expect = 2e-16
Identities = 63/229 (27%), Positives = 111/229 (48%), Gaps = 35/229 (15%)
Frame = -2
Query: 654 DTPADSGSDQPKKKRGRLDLSIESEEQYLAKVEVKIKIPEELKVWLVDDWDVITRQQKLA 475
+ P D D P +G+ S+ A ++K+++P+ L+ L+DD+D++ R +
Sbjct: 94 EAPRDDRDDTPGTSKGKKAKSVTIAPVMTAD-DMKVELPKPLRKILIDDYDLVCR-YFIN 151
Query: 474 ILPAKLTVSQIVDNYLAFKKSSKSHNQAKESVLVDITE---------------GIKEYFN 340
I+P + +V QI+++Y+ S + + +L++ E G+ +YFN
Sbjct: 152 IVPHEYSVDQIIEDYIKTIPVSNEQMRTVDDLLIEYEEADIKITNLALICTARGLVDYFN 211
Query: 339 ATLGS--QLLYKFERPQYSEI-----------------LQEYPDTPMSQVYGAVHLLRLF 217
TLGS QLLYKFERPQY+++ LQ+ P SQ YG VH LR+
Sbjct: 212 VTLGSSYQLLYKFERPQYNDLVKKRAMEKGIDITNPTALQDSGFRP-SQEYGIVHFLRML 270
Query: 216 AKMGPMLAYTALDEKSLHHVLSHIQDFLKYMVTNRSTLF-NLQDYGNAN 73
AK+ L T ++ ++ ++ + D + ++ N + DY A+
Sbjct: 271 AKLPDYLKLTQWNDHVINRIMIGVHDLIVFLNKNHGKYYRGSSDYQGAS 319
>Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical
protein F29D10.2 protein.
Length = 149
Score = 32.7 bits (71), Expect = 0.24
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = -3
Query: 320 CCTSSRGRSTARYCRSIPTPRCLRCTAPFTCCGC 219
CC R + CR+ RC C P CCGC
Sbjct: 73 CCCCCRPKCCCTCCRTCCCTRCCTCCRP-CCCGC 105
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = -3
Query: 320 CCTSSRGRSTARYCRSIPTPRCLRCTAPFTCCGCSR 213
CC G C PRC C P CC C R
Sbjct: 54 CCGCGGGGGGCGCCCC--RPRCCCCCRPKCCCTCCR 87
>Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical
protein C06A1.7 protein.
Length = 149
Score = 32.7 bits (71), Expect = 0.24
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = -3
Query: 320 CCTSSRGRSTARYCRSIPTPRCLRCTAPFTCCGC 219
CC R + CR+ RC C P CCGC
Sbjct: 75 CCCCCRPKCCCTCCRTCCCTRCCTCCRP-CCCGC 107
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -3
Query: 320 CCTSSRGRSTARYCRSIPTPRCLRCTAPFTCCGC 219
CCT R R C P C C CCGC
Sbjct: 84 CCTCCRTCCCTRCCTCC-RPCCCGCGCGCGCCGC 116
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = -3
Query: 320 CCTSSRGRSTARYCRSIPTPRCLRCTAPFTCCGCSR 213
CC G C PRC C P CC C R
Sbjct: 56 CCGCGGGGGGCGCCCC--RPRCCCCCRPKCCCTCCR 89
>Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical
protein C06A1.6 protein.
Length = 152
Score = 32.7 bits (71), Expect = 0.24
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = -3
Query: 320 CCTSSRGRSTARYCRSIPTPRCLRCTAPFTCCGC 219
CC R + CR+ RC C P CCGC
Sbjct: 78 CCCCCRPKCCCTCCRTCCCTRCCTCCRP-CCCGC 110
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -3
Query: 320 CCTSSRGRSTARYCRSIPTPRCLRCTAPFTCCGC 219
CCT R R C P C C CCGC
Sbjct: 87 CCTCCRTCCCTRCCTCC-RPCCCGCGCGCGCCGC 119
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = -3
Query: 320 CCTSSRGRSTARYCRSIPTPRCLRCTAPFTCCGCSR 213
CC G C PRC C P CC C R
Sbjct: 59 CCGCGGGGGGCGCCCC--RPRCCCCCRPKCCCTCCR 92
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = -3
Query: 320 CCTSSRGRSTARYCRSIPTPRCLRCTAPFTCCGC 219
CC R T CR+ RC C P CCGC
Sbjct: 93 CCCCCRRCCTC--CRTCCCTRCCTCCRP-CCCGC 123
>Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical protein
K12D12.1 protein.
Length = 1520
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -2
Query: 654 DTPADSGSDQPKKKRGRL 601
D + S SDQPKKKRGR+
Sbjct: 1497 DVDSGSDSDQPKKKRGRV 1514
>Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical protein
K12D12.1 protein.
Length = 1520
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -2
Query: 654 DTPADSGSDQPKKKRGRL 601
D + S SDQPKKKRGR+
Sbjct: 1497 DVDSGSDSDQPKKKRGRV 1514
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = -3
Query: 320 CCTSSRGRSTARYCRSIPTPRCLRCTAPFTCCGC 219
CC R T CR+ RC C P CCGC
Sbjct: 93 CCCCCRRCCTC--CRTCCCTRCCTCCRP-CCCGC 123
>AF022971-4|AAG23982.2| 579|Caenorhabditis elegans Hypothetical
protein C31B8.8 protein.
Length = 579
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = -2
Query: 639 SGSDQPKKKRGRLDLSIESEEQYLAKVEVKIKIPEELKVW 520
SGS Q K + RL SIES L+K +V+ I E +W
Sbjct: 133 SGSSQFKWSKTRLTYSIESWSSDLSKDDVRRAISEAYGLW 172
>AB007815-1|BAA28351.1| 579|Caenorhabditis elegans matrix
metalloproteinase protein.
Length = 579
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = -2
Query: 639 SGSDQPKKKRGRLDLSIESEEQYLAKVEVKIKIPEELKVW 520
SGS Q K + RL SIES L+K +V+ I E +W
Sbjct: 133 SGSSQFKWSKTRLTYSIESWSSDLSKDDVRRAISEAYGLW 172
>AF040652-7|AAB95017.1| 210|Caenorhabditis elegans Hypothetical
protein T05A8.6 protein.
Length = 210
Score = 28.7 bits (61), Expect = 3.9
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +3
Query: 117 SSPCTSRSPGCATTRGGATSRRAPCTPAS 203
++P T+++P C TT T++ CT S
Sbjct: 85 TAPTTTKAPDCTTTTAPTTTKAPDCTTCS 113
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -3
Query: 320 CCTSSRGRSTARYCRSIPTPRCLRCTAPFTCCGC 219
CCT R R C P C C CCGC
Sbjct: 98 CCTCCRTCCCTRCCTCC-RPCCCGCGCGCGCCGC 130
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -3
Query: 320 CCTSSRGRSTARYCRSIPTPRCLRCTAPFTCCGC 219
CCT R R C P C C CCGC
Sbjct: 99 CCTCCRTCCCTRCCTCC-RPCCCGCGCGCGCCGC 131
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -3
Query: 320 CCTSSRGRSTARYCRSIPTPRCLRCTAPFTCCGC 219
CCT R R C P C C CCGC
Sbjct: 99 CCTCCRTCCCTRCCTCC-RPCCCGCGCGCGCCGC 131
>U41263-3|AAC24425.1| 361|Caenorhabditis elegans Hypothetical
protein T19D12.5 protein.
Length = 361
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = -2
Query: 627 QPKKKRGRLDLSIESEEQYLAKVEVKIKIP 538
+PKK+RG+L + E+ LAK++ K +P
Sbjct: 93 EPKKRRGKLAKRMILEQHVLAKMQGKPHVP 122
>AF036688-2|AAY86223.1| 91|Caenorhabditis elegans Hypothetical
protein C24D10.9 protein.
Length = 91
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -2
Query: 666 TQSKDTPADSGSDQPKKKRGRLDLSIESEEQYLA 565
+ S P + S P K+RGR+ SI+S + L+
Sbjct: 20 SSSTSAPGSASSSGPTKRRGRIAASIDSARRRLS 53
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,020,733
Number of Sequences: 27780
Number of extensions: 221235
Number of successful extensions: 896
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 890
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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