Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_M20
         (670 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    24   1.1  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    23   3.5  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    23   3.5  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   4.6  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    21   8.0  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      21   8.0  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -2

Query: 558 EVKIKIPEELKVWL 517
           + KI IP+E+K+W+
Sbjct: 385 DTKITIPKEMKIWI 398


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 143 WMCDNTWWSDFSSSAVYASIGP 208
           W   NTW S  +S+   +S+GP
Sbjct: 23  WSRGNTWLSLDNSNMSMSSVGP 44


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 143 WMCDNTWWSDFSSSAVYASIGP 208
           W   NTW S  +S+   +S+GP
Sbjct: 23  WSRGNTWLSLDNSNMSMSSVGP 44


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -1

Query: 244 RRRSLAAVVRENGSDA 197
           RR+ LA +V+  GSDA
Sbjct: 275 RRKVLAGIVQTKGSDA 290


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 11/46 (23%), Positives = 25/46 (54%)
 Frame = +2

Query: 95  KLKSVDLFVTMYFKKSWMCDNTWWSDFSSSAVYASIGPIFANNRSK 232
           K +S+ LF+++      + +       ++  ++  IG +F+NN+SK
Sbjct: 2   KYESIALFISLIILNDEIYNIIASPQLNNPTLFM-IGGVFSNNKSK 46


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -2

Query: 276 EYPDTPMSQVYGAVHLLRLFAKMGPMLAYTALDEK 172
           E+ D P+ Q +  +H  ++  +  P L Y   DE+
Sbjct: 63  EHRDLPIYQSHHHLHHHQVLYQQSPYLMYENPDEE 97


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,346
Number of Sequences: 438
Number of extensions: 2677
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)