Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_M19
(585 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_579| Best HMM Match : No HMM Matches (HMM E-Value=.) 151 3e-37
SB_55396| Best HMM Match : Sod_Cu (HMM E-Value=1.5e-07) 66 3e-11
SB_580| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 6e-07
SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23) 39 0.003
SB_1231| Best HMM Match : UCH (HMM E-Value=1e-13) 31 0.69
SB_14385| Best HMM Match : ANF_receptor (HMM E-Value=6.5e-35) 31 0.91
SB_51387| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_50931| Best HMM Match : Extensin_2 (HMM E-Value=0.14) 29 2.8
SB_19464| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_9657| Best HMM Match : P_proprotein (HMM E-Value=7.5e-29) 29 3.7
SB_8470| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_58981| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_41181| Best HMM Match : DUF164 (HMM E-Value=2.1) 28 4.9
SB_4095| Best HMM Match : LRR_adjacent (HMM E-Value=2) 28 4.9
SB_49217| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_25393| Best HMM Match : Collagen (HMM E-Value=0.00015) 28 6.4
SB_7332| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
SB_2229| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-25) 27 8.5
>SB_579| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 154
Score = 151 bits (367), Expect = 3e-37
Identities = 65/123 (52%), Positives = 87/123 (70%)
Frame = -2
Query: 392 VQGGITGLPPGEYGFHVHEKGDLSGGCVSTGSHFNPEHKDHGHPNDVNRHVGDLGNVVFD 213
+ G I GL G +GFH+H GD + GCVS G HFNP K+HG P+D NRHVGDLGNVV
Sbjct: 30 ITGTIEGLKAGNHGFHIHVYGDNTNGCVSAGPHFNPFKKEHGGPSDENRHVGDLGNVVAG 89
Query: 212 ENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKADDYGKSDHPDSRKTGNAGGRVACGVIG 33
++ + ID+ D ++L G H ++GR+VV+H DD G+ H DS+ TG+AGGR+ACGVIG
Sbjct: 90 DDGKACIDMTDALVTLVGEHSVVGRSVVVHADEDDLGRGGHEDSKTTGHAGGRLACGVIG 149
Query: 32 MRE 24
+ +
Sbjct: 150 ITQ 152
>SB_55396| Best HMM Match : Sod_Cu (HMM E-Value=1.5e-07)
Length = 100
Score = 65.7 bits (153), Expect = 3e-11
Identities = 30/70 (42%), Positives = 43/70 (61%)
Frame = -2
Query: 245 HVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKADDYGKSDHPDSRKTGN 66
HVGDLGN++ ++N + D + + IIGRA+V+H DD G+ H S+ TGN
Sbjct: 1 HVGDLGNIIANQNGRATFRFEDKTVKV---WDIIGRAIVVHADEDDLGRGGHELSKSTGN 57
Query: 65 AGGRVACGVI 36
+G RV CG+I
Sbjct: 58 SGARVGCGII 67
>SB_580| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 51.2 bits (117), Expect = 6e-07
Identities = 22/48 (45%), Positives = 32/48 (66%)
Frame = -2
Query: 272 HGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVV 129
HG P D +RH+GDLGN+ D N + + + D +SL+G IIGR++V
Sbjct: 2 HGAPEDKDRHLGDLGNIEADANGIADVSITDCLVSLTGQCSIIGRSLV 49
>SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23)
Length = 1531
Score = 38.7 bits (86), Expect = 0.003
Identities = 37/125 (29%), Positives = 61/125 (48%), Gaps = 13/125 (10%)
Frame = -2
Query: 461 AVLSTETIRGNITFTQVQ-DGKVHVQGGITGLPPGEYGFHVHE-----KGDLSGGC--VS 306
A S IRG +TFTQ + +++ +TG+ + +H+ KG+ + C V+
Sbjct: 59 ATFSMSGIRGTVTFTQSSPNTSTNIKLALTGVNE-TLSWQIHDLPVIYKGNAATTCNTVA 117
Query: 305 TGSHFNPEHKDHGHPNDVNRH---VGDL-GNVVF-DENHYSRIDLVDDQISLSGPHGIIG 141
G+ ++P+ + + VGDL G F D N+ S + D + L+G HGI G
Sbjct: 118 LGNLYDPDGTATAQCSAAQKKSCAVGDLRGKFGFIDGNNMSSV-FHDSNLPLTGRHGIFG 176
Query: 140 RAVVL 126
R +VL
Sbjct: 177 RTLVL 181
>SB_1231| Best HMM Match : UCH (HMM E-Value=1e-13)
Length = 969
Score = 31.1 bits (67), Expect = 0.69
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 6/103 (5%)
Frame = -2
Query: 338 EKGDLSGGCVSTGSHFNPEHKDHGHPNDVNRHVGDLGNVVFDE---NHYSRIDLVD-DQI 171
++ DL S H N +D GH ++ + D N DE +H S D++D + +
Sbjct: 204 QRSDLIHSSQSEAVHRNVHAEDEGHIDEYGCGLHD--NEQLDEEVASHVSGDDIMDVNDL 261
Query: 170 SLSGPHGIIGRAVVLHEKA--DDYGKSDHPDSRKTGNAGGRVA 48
S + R V +K D+YG H D + G A V+
Sbjct: 262 IHSSQSEAVHRNVHAEDKGHIDEYGCGLHNDEQSDGEAASHVS 304
>SB_14385| Best HMM Match : ANF_receptor (HMM E-Value=6.5e-35)
Length = 1003
Score = 30.7 bits (66), Expect = 0.91
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = -2
Query: 449 TETIRGNITFTQVQDGKVHVQGGITGLPPGEYGFHVHEKGDLSGGCVSTGSH 294
+E + N T DG+V V+ +TG G + E+ DL+ G ++ SH
Sbjct: 395 SEILHFNYTIYMSPDGRVGVENPVTGNWDGVINELIQERADLAVGPITITSH 446
>SB_51387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -2
Query: 209 NHYSRIDLVDDQISLSGPHGIIG-RAVVLHEKADDYGKSDHP 87
NH+S L + +L GP+ G R +++++K D Y K D P
Sbjct: 111 NHHSTGILKCQRANLKGPNLCAGKRRILIYDKYDKYDKYDFP 152
>SB_50931| Best HMM Match : Extensin_2 (HMM E-Value=0.14)
Length = 348
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -2
Query: 374 GLPPGEYGFHVHEKGDLSGGCVSTGSHFNPEHKDHGHPNDV 252
GLPPG G +V + G + G+H + +H PN+V
Sbjct: 307 GLPPGNPGQYVTPQ-PRHAGLLENGNHVSEQHNKQTPPNNV 346
>SB_19464| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1653
Score = 29.1 bits (62), Expect = 2.8
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = -1
Query: 273 PRSSERCQPSRRRPWKRG-L*REPLQQDRPG-RRPDLAIGSARHHRQGGGAP 124
PRS ER RP +RG R P +++R G RRP A +R + G P
Sbjct: 621 PRSRERSDRRDERPQRRGSRGRSPGRREREGERRPRSAERQSRRQDEPKGEP 672
>SB_9657| Best HMM Match : P_proprotein (HMM E-Value=7.5e-29)
Length = 1779
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -1
Query: 561 SQRENKNAASTNIPGRDRSGDGSSRLHHAVSRHCRSIHRND*RQHHVH 418
S + K A GR R G S+ HH ++H R RN +HH H
Sbjct: 314 SVNQIKTANKHETFGRQRHGLRQSKKHHR-NKHYRHHDRNHHHRHHHH 360
>SB_8470| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3133
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = -3
Query: 523 SWPRSLWRRLIT---ASPRRLAPLPFYPQ-KRLEATSRSPR 413
++PRSLWRRL+ R P P P +R E SR+ R
Sbjct: 428 AYPRSLWRRLLVDLRGIVERGTPSPVQPMLRRFELASRALR 468
>SB_58981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 794
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -2
Query: 302 GSHFNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQIS 168
G+H N H HP++V+ L V +N S + D+Q S
Sbjct: 617 GNHLNTVHTPDNHPSNVHTPDNHLNTVHTPDNQPSTVHTPDNQPS 661
>SB_41181| Best HMM Match : DUF164 (HMM E-Value=2.1)
Length = 258
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 419 TQVQDGKVHVQGGITGLPPGEYGFHVHEKGDLSGGCVS 306
T V +G +HVQ +T +P G E D+ GC++
Sbjct: 58 TDVPEGSIHVQEEMTDVPKGSINVQ-EEITDVPEGCIN 94
>SB_4095| Best HMM Match : LRR_adjacent (HMM E-Value=2)
Length = 113
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -3
Query: 451 PQKRLEATSRSPRFKMGRSTFRGVSLGCLRVNMAF 347
PQK SR P+ +G++ FRG L L N+ F
Sbjct: 48 PQKSGTQLSRVPKVAIGKTQFRGKVLTSLEDNVGF 82
>SB_49217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 609
Score = 27.9 bits (59), Expect = 6.4
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +2
Query: 449 WIERQWRETAW*SRDEPSPERS 514
W ER W T W R +P+RS
Sbjct: 123 WFERGWSGTTWPGRKAGNPQRS 144
>SB_25393| Best HMM Match : Collagen (HMM E-Value=0.00015)
Length = 391
Score = 27.9 bits (59), Expect = 6.4
Identities = 23/62 (37%), Positives = 27/62 (43%)
Frame = -2
Query: 389 QGGITGLPPGEYGFHVHEKGDLSGGCVSTGSHFNPEHKDHGHPNDVNRHVGDLGNVVFDE 210
Q G TG PPGEYG++ G G G H P K P D N ++ G D
Sbjct: 91 QKGPTG-PPGEYGYNGF-PGSRHGQSGFPGLHGPPGPKG---PAD-NPYITTSGQQALDN 144
Query: 209 NH 204
NH
Sbjct: 145 NH 146
>SB_7332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1894
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = -1
Query: 273 PRSSERCQPSRRRPWKRGL*REPLQQDRPGRRPDLAIGSARHHRQ 139
P+ R R+P++ G ++P Q RPG++P + H+Q
Sbjct: 556 PQQPFRADQQNRQPFQSG--QQPQQAFRPGQQPQQPSRPGQQHQQ 598
>SB_2229| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-25)
Length = 419
Score = 27.5 bits (58), Expect = 8.5
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = -2
Query: 347 HVHEKGDLSGGCVSTGSHFNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRID 189
+V DL G + G+H HG+ ND+N V N + E++ + D
Sbjct: 348 NVPSVADLPNGQLHHGNHNINGPLFHGNNNDLNGQVSQRNNYNYSEDYLHQCD 400
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,255,166
Number of Sequences: 59808
Number of extensions: 458581
Number of successful extensions: 1716
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1708
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1410146228
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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